RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
CHRNA4-220ENST00000637628 TMEM167AQ8TBQ9 72 aa0.63□□□□□ -2.31
CHRNA4-220ENST00000637628 RNF213Q63HN8 5207 aa0.62□□□□□ -2.31
CHRNA4-220ENST00000637628 MXRA5Q9NR99 2828 aa0.62□□□□□ -2.31
CHRNA4-220ENST00000637628 RELNP78509 3460 aa0.62□□□□□ -2.31
CHRNA4-220ENST00000637628 KRTAP5-2Q701N4 177 aa0.62□□□□□ -2.31
CHRNA4-220ENST00000637628 KRTAP4-4Q9BYR3 166 aa0.62□□□□□ -2.31
CHRNA4-220ENST00000637628 STAB2Q8WWQ8 2551 aa0.62□□□□□ -2.31
CHRNA4-220ENST00000637628 ASPMQ8IZT6 3477 aa0.62□□□□□ -2.31
CHRNA4-220ENST00000637628 COL12A1Q99715 3063 aa0.61□□□□□ -2.31
CHRNA4-220ENST00000637628 HMCN1Q96RW7 5635 aa0.61□□□□□ -2.31
CHRNA4-220ENST00000637628 KRTAP4-3Q9BYR4 195 aa0.61□□□□□ -2.31
CHRNA4-220ENST00000637628 CENPFP49454 3210 aa0.61□□□□□ -2.31
CHRNA4-220ENST00000637628 UNC80Q8N2C7 3258 aa0.61□□□□□ -2.31
CHRNA4-220ENST00000637628 SPTBN5Q9NRC6 3674 aaKnown RBP0.61□□□□□ -2.31
CHRNA4-220ENST00000637628 LAMA3Q16787 3333 aa0.6□□□□□ -2.31
CHRNA4-220ENST00000637628 TLN1Q9Y490 2541 aaKnown RBP0.6□□□□□ -2.31
CHRNA4-220ENST00000637628 SPRR2BP35325 72 aa0.6□□□□□ -2.31
CHRNA4-220ENST00000637628 HERC2O95714 4834 aa0.6□□□□□ -2.31
CHRNA4-220ENST00000637628 TENM3Q9P273 2699 aa0.6□□□□□ -2.31
CHRNA4-220ENST00000637628 NBEAQ8NFP9 2946 aa0.59□□□□□ -2.31
CHRNA4-220ENST00000637628 RIF1Q5UIP0 2472 aaKnown RBP0.59□□□□□ -2.31
CHRNA4-220ENST00000637628 MTORP42345 2549 aa0.59□□□□□ -2.31
CHRNA4-220ENST00000637628 HMCN2Q8NDA2 5059 aa0.59□□□□□ -2.31
CHRNA4-220ENST00000637628 MUC19Q7Z5P9 8384 aa0.59□□□□□ -2.32
CHRNA4-220ENST00000637628 DCHS1Q96JQ0 3298 aa0.59□□□□□ -2.32
CHRNA4-220ENST00000637628 KMT2AQ03164 3969 aa0.59□□□□□ -2.32
CHRNA4-220ENST00000637628 EP400Q96L91 3159 aa0.59□□□□□ -2.32
CHRNA4-220ENST00000637628 BRCA2P51587 3418 aa0.58□□□□□ -2.32
CHRNA4-220ENST00000637628 TGP01266 2768 aa0.58□□□□□ -2.32
CHRNA4-220ENST00000637628 SPTAN1Q13813 2472 aaKnown RBP0.58□□□□□ -2.32
CHRNA4-220ENST00000637628 TLN2Q9Y4G6 2542 aa0.58□□□□□ -2.32
CHRNA4-220ENST00000637628 MUC3AQ02505 3323 aa0.58□□□□□ -2.32
CHRNA4-220ENST00000637628 HIVEP1P15822 2718 aa0.58□□□□□ -2.32
CHRNA4-220ENST00000637628 HUWE1Q7Z6Z7 4374 aaKnown RBP0.57□□□□□ -2.32
CHRNA4-220ENST00000637628 RPL39P5Q59GN2 51 aa0.57□□□□□ -2.32
CHRNA4-220ENST00000637628 NIPBLQ6KC79 2804 aaeCLIP0.57□□□□□ -2.32
CHRNA4-220ENST00000637628 VPS13BQ7Z7G8 4022 aa0.57□□□□□ -2.32
CHRNA4-220ENST00000637628 ITPR2Q14571 2701 aa0.57□□□□□ -2.32
CHRNA4-220ENST00000637628 KRTAP21-2Q3LI59 83 aa0.56□□□□□ -2.32
CHRNA4-220ENST00000637628 RHPN1-AS1Q9BWJ2 59 aa0.56□□□□□ -2.32
CHRNA4-220ENST00000637628 NF1P21359 2839 aa0.56□□□□□ -2.32
CHRNA4-220ENST00000637628 COL7A1Q02388 2944 aa0.56□□□□□ -2.32
CHRNA4-220ENST00000637628 ZZEF1O43149 2961 aa0.56□□□□□ -2.32
CHRNA4-220ENST00000637628 CFAP54Q96N23 3096 aa0.56□□□□□ -2.32
CHRNA4-220ENST00000637628 SACSQ9NZJ4 4579 aa0.55□□□□□ -2.32
CHRNA4-220ENST00000637628 LRBAP50851 2863 aa0.55□□□□□ -2.32
CHRNA4-220ENST00000637628 CRYBG3Q68DQ2 2970 aa0.55□□□□□ -2.32
CHRNA4-220ENST00000637628 MGAM2Q2M2H8 2515 aa0.55□□□□□ -2.32
CHRNA4-220ENST00000637628 C5orf42Q9H799 3197 aa0.55□□□□□ -2.32
CHRNA4-220ENST00000637628 KRTAP4-1Q9BYQ7 146 aa0.55□□□□□ -2.32
CHRNA4-220ENST00000637628 USP34Q70CQ2 3546 aa0.55□□□□□ -2.32
CHRNA4-220ENST00000637628 VPS13DQ5THJ4 4388 aa0.55□□□□□ -2.32
CHRNA4-220ENST00000637628 CEP250Q9BV73 2442 aa0.54□□□□□ -2.32
CHRNA4-220ENST00000637628 LRP1Q07954 4544 aaKnown RBP0.54□□□□□ -2.32
CHRNA4-220ENST00000637628 MYCBP2O75592 4640 aa0.54□□□□□ -2.32
CHRNA4-220ENST00000637628 DEFB108AA8MXU0 73 aa0.54□□□□□ -2.32
CHRNA4-220ENST00000637628 KRTAP8-1Q8IUC2 63 aa0.54□□□□□ -2.32
CHRNA4-220ENST00000637628 FRYQ5TBA9 3013 aa0.54□□□□□ -2.32
CHRNA4-220ENST00000637628 DCHS2Q6V1P9 2916 aa0.54□□□□□ -2.32
CHRNA4-220ENST00000637628 DMXL1Q9Y485 3027 aa0.54□□□□□ -2.32
CHRNA4-220ENST00000637628 UTRNP46939 3433 aa0.53□□□□□ -2.32
CHRNA4-220ENST00000637628 MT1AP04731 61 aa0.53□□□□□ -2.32
CHRNA4-220ENST00000637628 SPRR2AP35326 72 aa0.53□□□□□ -2.32
CHRNA4-220ENST00000637628 KRTAP6-2Q3LI66 62 aa0.53□□□□□ -2.32
CHRNA4-220ENST00000637628 KRTAP5-10Q6L8G5 202 aa0.53□□□□□ -2.32
CHRNA4-220ENST00000637628 CUBNO60494 3623 aa0.53□□□□□ -2.32
CHRNA4-220ENST00000637628 FAM186AA6NE01 2351 aa0.53□□□□□ -2.33
CHRNA4-220ENST00000637628 DNAH11Q96DT5 4516 aa0.52□□□□□ -2.33
CHRNA4-220ENST00000637628 A0A096LNI7 61 aa0.52□□□□□ -2.33
CHRNA4-220ENST00000637628 HTTP42858 3142 aa0.52□□□□□ -2.33
CHRNA4-220ENST00000637628 OBSCNQ5VST9 7968 aa0.52□□□□□ -2.33
CHRNA4-220ENST00000637628 USH2AO75445 5202 aa0.51□□□□□ -2.33
CHRNA4-220ENST00000637628 FCGBPQ9Y6R7 5405 aaPredicted RBP0.51□□□□□ -2.33
CHRNA4-220ENST00000637628 H3BUX3 64 aa0.51□□□□□ -2.33
CHRNA4-220ENST00000637628 HRNRQ86YZ3 2850 aaPredicted RBP0.51□□□□□ -2.33
CHRNA4-220ENST00000637628 SPENQ96T58 3664 aaKnown RBP0.5□□□□□ -2.33
CHRNA4-220ENST00000637628 MYO15AQ9UKN7 3530 aa0.5□□□□□ -2.33
CHRNA4-220ENST00000637628 LOC400499M0QZD8 3231 aa0.49□□□□□ -2.33
CHRNA4-220ENST00000637628 NBPF19A0A087WUL8 3843 aa0.49□□□□□ -2.33
CHRNA4-220ENST00000637628 PKHD1L1Q86WI1 4243 aa0.49□□□□□ -2.33
CHRNA4-220ENST00000637628 MUC12Q9UKN1 5478 aa0.49□□□□□ -2.33
CHRNA4-220ENST00000637628 DNAH3Q8TD57 4116 aa0.49□□□□□ -2.33
CHRNA4-220ENST00000637628 SMR3BP02814 79 aaPredicted RBP0.48□□□□□ -2.33
CHRNA4-220ENST00000637628 TACC2O95359 2948 aa0.48□□□□□ -2.33
CHRNA4-220ENST00000637628 HSPG2P98160 4391 aa0.48□□□□□ -2.33
CHRNA4-220ENST00000637628 ANK3Q12955 4377 aaKnown RBP0.48□□□□□ -2.33
CHRNA4-220ENST00000637628 DNAH14Q0VDD8 3507 aa0.48□□□□□ -2.33
CHRNA4-220ENST00000637628 LPAP08519 4548 aa0.48□□□□□ -2.33
CHRNA4-220ENST00000637628 WDR87Q6ZQQ6 2873 aa0.47□□□□□ -2.33
CHRNA4-220ENST00000637628 FREM2Q5SZK8 3169 aa0.47□□□□□ -2.33
CHRNA4-220ENST00000637628 PKD1P98161 4303 aa0.47□□□□□ -2.33
CHRNA4-220ENST00000637628 DYNC2H1Q8NCM8 4307 aaKnown RBP0.47□□□□□ -2.33
CHRNA4-220ENST00000637628 HECTD4Q9Y4D8 3996 aa0.47□□□□□ -2.33
CHRNA4-220ENST00000637628 DMXL2Q8TDJ6 3036 aa0.47□□□□□ -2.33
CHRNA4-220ENST00000637628 DNAH2Q9P225 4427 aa0.47□□□□□ -2.33
CHRNA4-220ENST00000637628 VPS13AQ96RL7 3174 aa0.47□□□□□ -2.33
CHRNA4-220ENST00000637628 WDFY3Q8IZQ1 3526 aa0.46□□□□□ -2.34
CHRNA4-220ENST00000637628 SMG1Q96Q15 3661 aaKnown RBP0.46□□□□□ -2.34
CHRNA4-220ENST00000637628 XIRP2A4UGR9 3374 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms