RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 CHIC1Q5VXU3 224 aa8.59□□□□□ -1.03
CHRNA4-220ENST00000637628 AEBP2Q6ZN18 517 aaPredicted RBP8.1□□□□□ -1.11
CHRNA4-220ENST00000637628 SLC24A1O60721 1099 aa7.66□□□□□ -1.18
CHRNA4-220ENST00000637628 EHMT2Q96KQ7 1210 aa7.64□□□□□ -1.19
CHRNA4-220ENST00000637628 PHF23Q9BUL5 403 aaPredicted RBP7.62□□□□□ -1.19
CHRNA4-220ENST00000637628 PLPPR3Q6T4P5 718 aa7.31□□□□□ -1.24
CHRNA4-220ENST00000637628 KCNA4P22459 653 aa7.17□□□□□ -1.26
CHRNA4-220ENST00000637628 CSRNP3Q8WYN3 585 aa7.13□□□□□ -1.27
CHRNA4-220ENST00000637628 RTN4Q9NQC3 1192 aaKnown RBP7.11□□□□□ -1.27
CHRNA4-220ENST00000637628 AMER1Q5JTC6 1135 aaPredicted RBP7.1□□□□□ -1.27
CHRNA4-220ENST00000637628 SLC4A1APQ9BWU0 796 aaKnown RBP6.98□□□□□ -1.29
CHRNA4-220ENST00000637628 NCBP3Q53F19 620 aaKnown RBP6.85□□□□□ -1.31
CHRNA4-220ENST00000637628 ADRA2BP18089 450 aa6.81□□□□□ -1.32
CHRNA4-220ENST00000637628 SENP3Q9H4L4 574 aaPredicted RBP6.77□□□□□ -1.33
CHRNA4-220ENST00000637628 DAXXQ9UER7 740 aaPredicted RBP6.7□□□□□ -1.34
CHRNA4-220ENST00000637628 PRKCSHP14314 528 aaPredicted RBP6.63□□□□□ -1.35
CHRNA4-220ENST00000637628 ZBTB22O15209 634 aa6.59□□□□□ -1.35
CHRNA4-220ENST00000637628 BCANQ96GW7 911 aa6.56□□□□□ -1.36
CHRNA4-220ENST00000637628 PPP4R3CPQ6ZMV5 832 aa6.53□□□□□ -1.36
CHRNA4-220ENST00000637628 TAOK2Q9UL54 1235 aa6.53□□□□□ -1.36
CHRNA4-220ENST00000637628 PPP6R1Q9UPN7 881 aa6.5□□□□□ -1.37
CHRNA4-220ENST00000637628 PLCB2Q00722 1185 aa6.49□□□□□ -1.37
CHRNA4-220ENST00000637628 ARXQ96QS3 562 aa6.49□□□□□ -1.37
CHRNA4-220ENST00000637628 HAP1P54257 671 aaPredicted RBP6.47□□□□□ -1.37
CHRNA4-220ENST00000637628 FKBP8Q14318 412 aa6.47□□□□□ -1.37
CHRNA4-220ENST00000637628 NPM3O75607 178 aaKnown RBP6.46□□□□□ -1.38
CHRNA4-220ENST00000637628 TPRNQ4KMQ1 711 aa6.44□□□□□ -1.38
CHRNA4-220ENST00000637628 TIMELESSQ9UNS1 1208 aa6.43□□□□□ -1.38
CHRNA4-220ENST00000637628 FOXD4L1Q9NU39 408 aa6.41□□□□□ -1.38
CHRNA4-220ENST00000637628 TULP1O00294 542 aaPredicted RBP6.38□□□□□ -1.39
CHRNA4-220ENST00000637628 HOMEZQ8IX15 550 aa6.34□□□□□ -1.39
CHRNA4-220ENST00000637628 VSIG10Q8N0Z9 540 aa6.32□□□□□ -1.4
CHRNA4-220ENST00000637628 RANGAP1P46060 587 aaPredicted RBP6.28□□□□□ -1.4
CHRNA4-220ENST00000637628 ERICH6Q7L0X2 663 aa6.28□□□□□ -1.4
CHRNA4-220ENST00000637628 GTF3C3Q9Y5Q9 886 aa6.27□□□□□ -1.41
CHRNA4-220ENST00000637628 DCAF8L2P0C7V8 631 aa6.26□□□□□ -1.41
CHRNA4-220ENST00000637628 FOXD1Q16676 465 aa6.19□□□□□ -1.42
CHRNA4-220ENST00000637628 CNKSR2Q8WXI2 1034 aa6.18□□□□□ -1.42
CHRNA4-220ENST00000637628 C14orf37Q86TY3 774 aa6.14□□□□□ -1.43
CHRNA4-220ENST00000637628 KDM2AQ9Y2K7 1162 aa6.14□□□□□ -1.43
CHRNA4-220ENST00000637628 TMEM132AQ24JP5 1023 aa6.13□□□□□ -1.43
CHRNA4-220ENST00000637628 FBLN2P98095 1184 aa6.11□□□□□ -1.43
CHRNA4-220ENST00000637628 PODXL2Q9NZ53 605 aa6.11□□□□□ -1.43
CHRNA4-220ENST00000637628 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.08□□□□□ -1.44
CHRNA4-220ENST00000637628 ATXN8OSP0DMR3 200 aa6.07□□□□□ -1.44
CHRNA4-220ENST00000637628 PIAS4Q8N2W9 510 aaPredicted RBP6.07□□□□□ -1.44
CHRNA4-220ENST00000637628 NBR1Q14596 966 aa6.05□□□□□ -1.44
CHRNA4-220ENST00000637628 DNAJC5BQ9UF47 199 aa6.05□□□□□ -1.44
CHRNA4-220ENST00000637628 PAXIP1Q6ZW49 1069 aaPredicted RBP6.04□□□□□ -1.44
CHRNA4-220ENST00000637628 CFAP44Q96MT7 982 aa6.04□□□□□ -1.44
CHRNA4-220ENST00000637628 BBXQ8WY36 941 aaPredicted RBP6.01□□□□□ -1.45
CHRNA4-220ENST00000637628 FBXO3Q9UK99 471 aa6.01□□□□□ -1.45
CHRNA4-220ENST00000637628 SCAF1Q9H7N4 1312 aaKnown RBP6□□□□□ -1.45
CHRNA4-220ENST00000637628 NPM2Q86SE8 214 aaKnown RBP5.97□□□□□ -1.45
CHRNA4-220ENST00000637628 MYCNP04198 464 aaPredicted RBP5.96□□□□□ -1.46
CHRNA4-220ENST00000637628 SUPT5HO00267 1087 aaKnown RBP5.95□□□□□ -1.46
CHRNA4-220ENST00000637628 KLHL34Q8N239 644 aa5.95□□□□□ -1.46
CHRNA4-220ENST00000637628 PELP1Q8IZL8 1130 aaKnown RBP5.94□□□□□ -1.46
CHRNA4-220ENST00000637628 TSHZ2Q9NRE2 1034 aa5.94□□□□□ -1.46
CHRNA4-220ENST00000637628 PKD2Q13563 968 aa5.93□□□□□ -1.46
CHRNA4-220ENST00000637628 SLC4A2P04920 1241 aa5.91□□□□□ -1.46
CHRNA4-220ENST00000637628 VASPP50552 380 aaPredicted RBP5.91□□□□□ -1.46
CHRNA4-220ENST00000637628 APLP2Q06481 763 aa5.91□□□□□ -1.46
CHRNA4-220ENST00000637628 SPRYD3Q8NCJ5 442 aa5.91□□□□□ -1.46
CHRNA4-220ENST00000637628 TTBK1Q5TCY1 1321 aaPredicted RBP5.89□□□□□ -1.47
CHRNA4-220ENST00000637628 NPM1P06748 294 aaKnown RBP eCLIP5.88□□□□□ -1.47
CHRNA4-220ENST00000637628 RNF216Q9NWF9 866 aaPredicted RBP5.88□□□□□ -1.47
CHRNA4-220ENST00000637628 MYT1Q01538 1121 aa5.87□□□□□ -1.47
CHRNA4-220ENST00000637628 IFNLR1Q8IU57 520 aaPredicted RBP5.87□□□□□ -1.47
CHRNA4-220ENST00000637628 TRIM26Q12899 539 aaPredicted RBP5.86□□□□□ -1.47
CHRNA4-220ENST00000637628 ECM2O94769 699 aaPredicted RBP5.83□□□□□ -1.48
CHRNA4-220ENST00000637628 UBTFP17480 764 aaKnown RBP5.83□□□□□ -1.48
CHRNA4-220ENST00000637628 DNAJC5Q9H3Z4 198 aa5.8□□□□□ -1.48
CHRNA4-220ENST00000637628 SPDYE4A6NLX3 237 aa5.77□□□□□ -1.49
CHRNA4-220ENST00000637628 HRCP23327 699 aa5.75□□□□□ -1.49
CHRNA4-220ENST00000637628 MAPK8IP2Q13387 824 aaPredicted RBP5.75□□□□□ -1.49
CHRNA4-220ENST00000637628 ATF5Q9Y2D1 282 aaPredicted RBP5.74□□□□□ -1.49
CHRNA4-220ENST00000637628 RGL2O15211 777 aa5.72□□□□□ -1.49
CHRNA4-220ENST00000637628 CHGAP10645 457 aaKnown RBP5.71□□□□□ -1.5
CHRNA4-220ENST00000637628 SPOCK2Q92563 424 aa5.7□□□□□ -1.5
CHRNA4-220ENST00000637628 BRPF1P55201 1214 aaPredicted RBP5.69□□□□□ -1.5
CHRNA4-220ENST00000637628 PROM2Q8N271 834 aa5.69□□□□□ -1.5
CHRNA4-220ENST00000637628 CCDC9Q9Y3X0 531 aaKnown RBP5.69□□□□□ -1.5
CHRNA4-220ENST00000637628 ARID3AQ99856 593 aa5.66□□□□□ -1.5
CHRNA4-220ENST00000637628 ZBTB7CA1YPR0 619 aa5.65□□□□□ -1.5
CHRNA4-220ENST00000637628 HOXD11P31277 338 aaPredicted RBP5.65□□□□□ -1.5
CHRNA4-220ENST00000637628 NEUROD2Q15784 382 aa5.65□□□□□ -1.5
CHRNA4-220ENST00000637628 RSPH6AQ9H0K4 717 aa5.63□□□□□ -1.51
CHRNA4-220ENST00000637628 EIF5BO60841 1220 aaKnown RBP5.62□□□□□ -1.51
CHRNA4-220ENST00000637628 LMOD2Q6P5Q4 547 aa5.62□□□□□ -1.51
CHRNA4-220ENST00000637628 ZMYND15Q9H091 742 aa5.62□□□□□ -1.51
CHRNA4-220ENST00000637628 SAMD1Q6SPF0 538 aaPredicted RBP5.6□□□□□ -1.51
CHRNA4-220ENST00000637628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.59□□□□□ -1.51
CHRNA4-220ENST00000637628 PDIA4P13667 645 aaKnown RBP5.59□□□□□ -1.51
CHRNA4-220ENST00000637628 TRHP20396 242 aaPredicted RBP5.59□□□□□ -1.51
CHRNA4-220ENST00000637628 HNRNPUL2Q1KMD3 747 aaKnown RBP5.59□□□□□ -1.51
CHRNA4-220ENST00000637628 P3H3Q8IVL6 736 aa5.57□□□□□ -1.52
CHRNA4-220ENST00000637628 HS6ST3Q8IZP7 471 aa5.57□□□□□ -1.52
CHRNA4-220ENST00000637628 LOC105371045A0A1W2PR82 267 aa5.56□□□□□ -1.52
CHRNA4-220ENST00000637628 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms