RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 H1FX-AS1Q4G0G2 97 aa6.71□□□□□ -1.34
LINC00643-207ENST00000637212 DMAC1Q96GE9 116 aa6.7□□□□□ -1.34
LINC00643-207ENST00000637212 KRTAP9-2Q9BYQ4 174 aa6.68□□□□□ -1.34
LINC00643-207ENST00000637212 ACYP2P14621 99 aa6.67□□□□□ -1.34
LINC00643-207ENST00000637212 FAT4Q6V0I7 4981 aa6.67□□□□□ -1.34
LINC00643-207ENST00000637212 TMEM258P61165 79 aa6.65□□□□□ -1.34
LINC00643-207ENST00000637212 ATP5EP56381 51 aaPredicted RBP6.64□□□□□ -1.35
LINC00643-207ENST00000637212 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.63□□□□□ -1.35
LINC00643-207ENST00000637212 KRTAP9-6A0A140TA67 174 aa6.61□□□□□ -1.35
LINC00643-207ENST00000637212 S4R3F8 94 aa6.57□□□□□ -1.36
LINC00643-207ENST00000637212 MT1HP80294 61 aa6.54□□□□□ -1.36
LINC00643-207ENST00000637212 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
LINC00643-207ENST00000637212 LCA10Q71F78 164 aa6.53□□□□□ -1.36
LINC00643-207ENST00000637212 KRTAP4-12Q9BQ66 201 aa6.53□□□□□ -1.36
LINC00643-207ENST00000637212 CHKB-CPT1BH3BT56 60 aa6.52□□□□□ -1.37
LINC00643-207ENST00000637212 COA5Q86WW8 74 aa6.51□□□□□ -1.37
LINC00643-207ENST00000637212 CSAG1Q6PB30 78 aa6.5□□□□□ -1.37
LINC00643-207ENST00000637212 LCE3BQ5TA77 95 aa6.49□□□□□ -1.37
LINC00643-207ENST00000637212 SPTSSBQ8NFR3 76 aa6.49□□□□□ -1.37
LINC00643-207ENST00000637212 M0R2T5 61 aa6.46□□□□□ -1.38
LINC00643-207ENST00000637212 SERP1Q9Y6X1 66 aa6.46□□□□□ -1.38
LINC00643-207ENST00000637212 KRTAP19-1Q8IUB9 90 aa6.42□□□□□ -1.38
LINC00643-207ENST00000637212 RPS28P62857 69 aaKnown RBP6.4□□□□□ -1.38
LINC00643-207ENST00000637212 H0YAA0 97 aa6.34□□□□□ -1.39
LINC00643-207ENST00000637212 KRTAP10-6P60371 365 aaPredicted RBP6.34□□□□□ -1.39
LINC00643-207ENST00000637212 KRTAP9-9Q9BYP9 154 aa6.32□□□□□ -1.4
LINC00643-207ENST00000637212 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
LINC00643-207ENST00000637212 KRTAP9-8Q9BYQ0 159 aa6.28□□□□□ -1.4
LINC00643-207ENST00000637212 CRCT1Q9UGL9 99 aa6.28□□□□□ -1.4
LINC00643-207ENST00000637212 SMIM26A0A096LP01 95 aa6.27□□□□□ -1.41
LINC00643-207ENST00000637212 SEC61GP60059 68 aa6.25□□□□□ -1.41
LINC00643-207ENST00000637212 ADM2Q7Z4H4 148 aa6.25□□□□□ -1.41
LINC00643-207ENST00000637212 LINC01558Q9Y6Z2 57 aa6.24□□□□□ -1.41
LINC00643-207ENST00000637212 FSIP2Q5CZC0 6907 aa6.23□□□□□ -1.41
LINC00643-207ENST00000637212 V9GYY9 64 aa6.23□□□□□ -1.41
LINC00643-207ENST00000637212 KRTAP4-8A0A0G2JLE6 195 aa6.22□□□□□ -1.41
LINC00643-207ENST00000637212 MT2AP02795 61 aa6.22□□□□□ -1.41
LINC00643-207ENST00000637212 Q1T7F1 81 aa6.2□□□□□ -1.42
LINC00643-207ENST00000637212 A0A1B0GU69 56 aa6.19□□□□□ -1.42
LINC00643-207ENST00000637212 KRTAP10-10P60014 251 aa6.18□□□□□ -1.42
LINC00643-207ENST00000637212 PRR15LQ9BU68 103 aa6.18□□□□□ -1.42
LINC00643-207ENST00000637212 MT1FP04733 61 aa6.17□□□□□ -1.42
LINC00643-207ENST00000637212 CRIPTQ9P021 101 aa6.17□□□□□ -1.42
LINC00643-207ENST00000637212 P0C880 135 aa6.16□□□□□ -1.42
LINC00643-207ENST00000637212 A0A1B0GU33 70 aa6.08□□□□□ -1.44
LINC00643-207ENST00000637212 M0QZ58 72 aa6.08□□□□□ -1.44
LINC00643-207ENST00000637212 LCE1DQ5T752 114 aa6.07□□□□□ -1.44
LINC00643-207ENST00000637212 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
LINC00643-207ENST00000637212 R4GN34 69 aa6.05□□□□□ -1.44
LINC00643-207ENST00000637212 PSPHP1O15172 72 aa6.04□□□□□ -1.44
LINC00643-207ENST00000637212 SPRR2GQ9BYE4 73 aa6.04□□□□□ -1.44
LINC00643-207ENST00000637212 KRTAP4-7Q9BYR0 210 aa6.01□□□□□ -1.45
LINC00643-207ENST00000637212 Q5VV11 94 aa6□□□□□ -1.45
LINC00643-207ENST00000637212 UQCR11O14957 56 aa5.98□□□□□ -1.45
LINC00643-207ENST00000637212 KRTAP19-4Q3LI73 84 aa5.98□□□□□ -1.45
LINC00643-207ENST00000637212 KRTAP13-4Q3LI77 160 aa5.95□□□□□ -1.46
LINC00643-207ENST00000637212 H3BS24 57 aa5.93□□□□□ -1.46
LINC00643-207ENST00000637212 SPATA8Q6RVD6 105 aa5.93□□□□□ -1.46
LINC00643-207ENST00000637212 KRTAP19-8Q3LI54 63 aa5.92□□□□□ -1.46
LINC00643-207ENST00000637212 A6NN06 94 aa5.88□□□□□ -1.47
LINC00643-207ENST00000637212 MIR22HGQ0VDD5 57 aa5.88□□□□□ -1.47
LINC00643-207ENST00000637212 LINC01554Q52M75 96 aa5.88□□□□□ -1.47
LINC00643-207ENST00000637212 LCE4AQ5TA78 99 aa5.88□□□□□ -1.47
LINC00643-207ENST00000637212 KRTAP4-9Q9BYQ8 210 aa5.88□□□□□ -1.47
LINC00643-207ENST00000637212 A6NED7 52 aa5.87□□□□□ -1.47
LINC00643-207ENST00000637212 USH2AO75445 5202 aa5.86□□□□□ -1.47
LINC00643-207ENST00000637212 KRTAP9-7A8MTY7 169 aa5.85□□□□□ -1.47
LINC00643-207ENST00000637212 SSPOA2VEC9 5147 aa5.84□□□□□ -1.48
LINC00643-207ENST00000637212 A0A0D9SG42 100 aa5.83□□□□□ -1.48
LINC00643-207ENST00000637212 A8MU10 97 aa5.81□□□□□ -1.48
LINC00643-207ENST00000637212 PLAC4Q8WY50 150 aa5.81□□□□□ -1.48
LINC00643-207ENST00000637212 MT1BP07438 61 aa5.8□□□□□ -1.48
LINC00643-207ENST00000637212 CDC42SE1Q9NRR8 79 aa5.76□□□□□ -1.49
LINC00643-207ENST00000637212 KRTAP12-1P59990 96 aa5.75□□□□□ -1.49
LINC00643-207ENST00000637212 SPINT4Q6UDR6 99 aa5.73□□□□□ -1.49
LINC00643-207ENST00000637212 KRTAP4-2Q9BYR5 136 aa5.73□□□□□ -1.49
LINC00643-207ENST00000637212 FCGBPQ9Y6R7 5405 aaPredicted RBP5.73□□□□□ -1.49
LINC00643-207ENST00000637212 KRTAP12-2P59991 146 aa5.7□□□□□ -1.5
LINC00643-207ENST00000637212 K7ERS5 55 aa5.69□□□□□ -1.5
LINC00643-207ENST00000637212 KRTAP4-11Q9BYQ6 195 aa5.68□□□□□ -1.5
LINC00643-207ENST00000637212 LCE5AQ5TCM9 118 aa5.64□□□□□ -1.51
LINC00643-207ENST00000637212 CAMK2N1Q7Z7J9 78 aa5.64□□□□□ -1.51
LINC00643-207ENST00000637212 KRTAP19-6Q3LI70 58 aa5.63□□□□□ -1.51
LINC00643-207ENST00000637212 BRK1Q8WUW1 75 aa5.63□□□□□ -1.51
LINC00643-207ENST00000637212 PRO2289Q9P1D8 64 aa5.6□□□□□ -1.51
LINC00643-207ENST00000637212 KRTAP10-5P60370 271 aa5.59□□□□□ -1.51
LINC00643-207ENST00000637212 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
LINC00643-207ENST00000637212 MT1XP80297 61 aa5.57□□□□□ -1.52
LINC00643-207ENST00000637212 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
LINC00643-207ENST00000637212 C10orf95Q9H7T3 257 aa5.45□□□□□ -1.54
LINC00643-207ENST00000637212 PRO0628Q9UI54 55 aa5.45□□□□□ -1.54
LINC00643-207ENST00000637212 KRTAP6-3Q3LI67 103 aa5.41□□□□□ -1.54
LINC00643-207ENST00000637212 ROMO1P60602 79 aa5.39□□□□□ -1.55
LINC00643-207ENST00000637212 TNP1P09430 55 aa5.36□□□□□ -1.55
LINC00643-207ENST00000637212 PMAIP1Q13794 54 aa5.36□□□□□ -1.55
LINC00643-207ENST00000637212 KRTAP25-1Q3LHN0 102 aa5.33□□□□□ -1.56
LINC00643-207ENST00000637212 KRTAP10-7P60409 375 aaPredicted RBP5.32□□□□□ -1.56
LINC00643-207ENST00000637212 KRTAP10-12P60413 245 aa5.32□□□□□ -1.56
LINC00643-207ENST00000637212 NEBP20929 6669 aa5.27□□□□□ -1.57
LINC00643-207ENST00000637212 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms