RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 PSPHP1O15172 72 aa2.94□□□□□ -1.94
NEK3-211ENST00000629912 Q5VV11 94 aa2.94□□□□□ -1.94
NEK3-211ENST00000629912 SVIPQ8NHG7 77 aa2.93□□□□□ -1.94
NEK3-211ENST00000629912 PRR15LQ9BU68 103 aa2.93□□□□□ -1.94
NEK3-211ENST00000629912 KRTAP3-1Q9BYR8 98 aa2.93□□□□□ -1.94
NEK3-211ENST00000629912 COX6B2Q6YFQ2 88 aa2.92□□□□□ -1.94
NEK3-211ENST00000629912 KRTAP4-5Q9BYR2 181 aa2.92□□□□□ -1.94
NEK3-211ENST00000629912 PRO0628Q9UI54 55 aa2.92□□□□□ -1.94
NEK3-211ENST00000629912 TPRXLQ17RH7 258 aa2.91□□□□□ -1.94
NEK3-211ENST00000629912 KRTAP19-1Q8IUB9 90 aa2.91□□□□□ -1.94
NEK3-211ENST00000629912 BIRC6Q9NR09 4857 aa2.91□□□□□ -1.94
NEK3-211ENST00000629912 SPTSSBQ8NFR3 76 aa2.9□□□□□ -1.95
NEK3-211ENST00000629912 HERC2O95714 4834 aa2.9□□□□□ -1.95
NEK3-211ENST00000629912 BRK1Q8WUW1 75 aa2.89□□□□□ -1.95
NEK3-211ENST00000629912 ABCA13Q86UQ4 5058 aa2.87□□□□□ -1.95
NEK3-211ENST00000629912 A0A1B0GU69 56 aa2.87□□□□□ -1.95
NEK3-211ENST00000629912 KRTAP4-7Q9BYR0 210 aa2.87□□□□□ -1.95
NEK3-211ENST00000629912 LRP2P98164 4655 aa2.86□□□□□ -1.95
NEK3-211ENST00000629912 A6NED7 52 aa2.86□□□□□ -1.95
NEK3-211ENST00000629912 LCE1DQ5T752 114 aa2.85□□□□□ -1.95
NEK3-211ENST00000629912 LCA10Q71F78 164 aa2.85□□□□□ -1.95
NEK3-211ENST00000629912 CDC42SE1Q9NRR8 79 aa2.85□□□□□ -1.95
NEK3-211ENST00000629912 SEC61GP60059 68 aa2.84□□□□□ -1.95
NEK3-211ENST00000629912 SPATA8Q6RVD6 105 aa2.83□□□□□ -1.96
NEK3-211ENST00000629912 MUC17Q685J3 4493 aa2.82□□□□□ -1.96
NEK3-211ENST00000629912 LPAP08519 4548 aa2.82□□□□□ -1.96
NEK3-211ENST00000629912 UQCR11O14957 56 aa2.82□□□□□ -1.96
NEK3-211ENST00000629912 A8MU10 97 aa2.81□□□□□ -1.96
NEK3-211ENST00000629912 SEC61BP60468 96 aaKnown RBP2.81□□□□□ -1.96
NEK3-211ENST00000629912 H1FX-AS1Q4G0G2 97 aa2.81□□□□□ -1.96
NEK3-211ENST00000629912 MIR22HGQ0VDD5 57 aa2.79□□□□□ -1.96
NEK3-211ENST00000629912 RBM12B-AS1Q9P1G2 102 aa2.79□□□□□ -1.96
NEK3-211ENST00000629912 S4R3F8 94 aa2.79□□□□□ -1.96
NEK3-211ENST00000629912 A0A1B0GU33 70 aa2.77□□□□□ -1.97
NEK3-211ENST00000629912 PMAIP1Q13794 54 aa2.77□□□□□ -1.97
NEK3-211ENST00000629912 KRTAP4-9Q9BYQ8 210 aa2.77□□□□□ -1.97
NEK3-211ENST00000629912 KRTAP10-6P60371 365 aaPredicted RBP2.75□□□□□ -1.97
NEK3-211ENST00000629912 A6NN06 94 aa2.74□□□□□ -1.97
NEK3-211ENST00000629912 CSAG1Q6PB30 78 aa2.74□□□□□ -1.97
NEK3-211ENST00000629912 HERC1Q15751 4861 aa2.73□□□□□ -1.97
NEK3-211ENST00000629912 KRTAP4-1Q9BYQ7 146 aa2.73□□□□□ -1.97
NEK3-211ENST00000629912 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
NEK3-211ENST00000629912 H0YAA0 97 aa2.72□□□□□ -1.97
NEK3-211ENST00000629912 PCLOQ9Y6V0 5065 aa2.72□□□□□ -1.97
NEK3-211ENST00000629912 HMCN2Q8NDA2 5059 aa2.71□□□□□ -1.98
NEK3-211ENST00000629912 KRTAP19-2Q3LHN2 52 aa2.71□□□□□ -1.98
NEK3-211ENST00000629912 P0C880 135 aa2.68□□□□□ -1.98
NEK3-211ENST00000629912 ADM2Q7Z4H4 148 aa2.68□□□□□ -1.98
NEK3-211ENST00000629912 KTN1-AS1Q86SY8 53 aa2.67□□□□□ -1.98
NEK3-211ENST00000629912 FLGP20930 4061 aaPredicted RBP2.66□□□□□ -1.98
NEK3-211ENST00000629912 M0QZ58 72 aa2.66□□□□□ -1.98
NEK3-211ENST00000629912 KRTAP13-4Q3LI77 160 aa2.66□□□□□ -1.98
NEK3-211ENST00000629912 KRTAP4-11Q9BYQ6 195 aa2.65□□□□□ -1.99
NEK3-211ENST00000629912 K7ERS5 55 aa2.64□□□□□ -1.99
NEK3-211ENST00000629912 A0A0D9SG42 100 aa2.59□□□□□ -1.99
NEK3-211ENST00000629912 LCE4AQ5TA78 99 aa2.59□□□□□ -1.99
NEK3-211ENST00000629912 KRTAP12-1P59990 96 aa2.58□□□□□ -2
NEK3-211ENST00000629912 MUC2Q02817 5179 aa2.57□□□□□ -2
NEK3-211ENST00000629912 R4GN34 69 aa2.57□□□□□ -2
NEK3-211ENST00000629912 RNF213Q63HN8 5207 aa2.57□□□□□ -2
NEK3-211ENST00000629912 KRTAP12-2P59991 146 aa2.56□□□□□ -2
NEK3-211ENST00000629912 ROMO1P60602 79 aa2.56□□□□□ -2
NEK3-211ENST00000629912 CRIPTQ9P021 101 aa2.56□□□□□ -2
NEK3-211ENST00000629912 PRAC1Q96KF2 57 aa2.55□□□□□ -2
NEK3-211ENST00000629912 SPINT4Q6UDR6 99 aa2.54□□□□□ -2
NEK3-211ENST00000629912 LCE5AQ5TCM9 118 aa2.53□□□□□ -2
NEK3-211ENST00000629912 KRTAP5-3Q6L8H2 238 aa2.52□□□□□ -2.01
NEK3-211ENST00000629912 FAT4Q6V0I7 4981 aa2.51□□□□□ -2.01
NEK3-211ENST00000629912 UBR4Q5T4S7 5183 aa2.51□□□□□ -2.01
NEK3-211ENST00000629912 MT1HP80294 61 aa2.51□□□□□ -2.01
NEK3-211ENST00000629912 KRTAP19-4Q3LI73 84 aa2.51□□□□□ -2.01
NEK3-211ENST00000629912 KRTAP9-7A8MTY7 169 aa2.5□□□□□ -2.01
NEK3-211ENST00000629912 KRTAP25-1Q3LHN0 102 aa2.5□□□□□ -2.01
NEK3-211ENST00000629912 LINC01554Q52M75 96 aa2.5□□□□□ -2.01
NEK3-211ENST00000629912 M0R2T5 61 aa2.47□□□□□ -2.01
NEK3-211ENST00000629912 SPRR2GQ9BYE4 73 aa2.47□□□□□ -2.01
NEK3-211ENST00000629912 KRTAP9-8Q9BYQ0 159 aa2.46□□□□□ -2.02
NEK3-211ENST00000629912 MT2AP02795 61 aa2.44□□□□□ -2.02
NEK3-211ENST00000629912 C10orf95Q9H7T3 257 aa2.44□□□□□ -2.02
NEK3-211ENST00000629912 KRTAP9-3Q9BYQ3 159 aa2.43□□□□□ -2.02
NEK3-211ENST00000629912 MT1FP04733 61 aa2.42□□□□□ -2.02
NEK3-211ENST00000629912 KRTAP10-10P60014 251 aa2.42□□□□□ -2.02
NEK3-211ENST00000629912 CAMK2N1Q7Z7J9 78 aa2.41□□□□□ -2.02
NEK3-211ENST00000629912 KRTAP19-8Q3LI54 63 aa2.4□□□□□ -2.03
NEK3-211ENST00000629912 PLAC4Q8WY50 150 aa2.4□□□□□ -2.03
NEK3-211ENST00000629912 KRTAP23-1A1A580 65 aa2.36□□□□□ -2.03
NEK3-211ENST00000629912 PP632Q6XCG6 107 aa2.35□□□□□ -2.03
NEK3-211ENST00000629912 TNP1P09430 55 aa2.34□□□□□ -2.03
NEK3-211ENST00000629912 MT1BP07438 61 aa2.33□□□□□ -2.04
NEK3-211ENST00000629912 KRTAP10-5P60370 271 aa2.28□□□□□ -2.04
NEK3-211ENST00000629912 MT1XP80297 61 aa2.28□□□□□ -2.04
NEK3-211ENST00000629912 KRTAP15-1Q3LI76 137 aa2.26□□□□□ -2.05
NEK3-211ENST00000629912 PRO2289Q9P1D8 64 aa2.24□□□□□ -2.05
NEK3-211ENST00000629912 LCE3AQ5TA76 89 aa2.2□□□□□ -2.06
NEK3-211ENST00000629912 KRTAP8-1Q8IUC2 63 aa2.2□□□□□ -2.06
NEK3-211ENST00000629912 USH2AO75445 5202 aa2.19□□□□□ -2.06
NEK3-211ENST00000629912 H3BS24 57 aa2.18□□□□□ -2.06
NEK3-211ENST00000629912 KRTAP10-7P60409 375 aaPredicted RBP2.18□□□□□ -2.06
NEK3-211ENST00000629912 KRTAP10-12P60413 245 aa2.17□□□□□ -2.06
NEK3-211ENST00000629912 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms