RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 C4orf26Q17RF5 130 aa8.08□□□□□ -1.12
CD40-207ENST00000620709 DMAC1Q96GE9 116 aa8.08□□□□□ -1.12
CD40-207ENST00000620709 KRTAP9-8Q9BYQ0 159 aa8.06□□□□□ -1.12
CD40-207ENST00000620709 RBM12B-AS1Q9P1G2 102 aa8.06□□□□□ -1.12
CD40-207ENST00000620709 SERP1Q9Y6X1 66 aa8.05□□□□□ -1.12
CD40-207ENST00000620709 A8MUN3 132 aa8.03□□□□□ -1.12
CD40-207ENST00000620709 ACYP2P14621 99 aa8.03□□□□□ -1.12
CD40-207ENST00000620709 RPS28P62857 69 aaKnown RBP7.99□□□□□ -1.13
CD40-207ENST00000620709 COA5Q86WW8 74 aa7.98□□□□□ -1.13
CD40-207ENST00000620709 USH2AO75445 5202 aa7.98□□□□□ -1.13
CD40-207ENST00000620709 MT2AP02795 61 aa7.96□□□□□ -1.14
CD40-207ENST00000620709 MPLKIPQ8TAP9 179 aa7.96□□□□□ -1.14
CD40-207ENST00000620709 SSPOA2VEC9 5147 aa7.95□□□□□ -1.14
CD40-207ENST00000620709 KRTAP3-1Q9BYR8 98 aa7.95□□□□□ -1.14
CD40-207ENST00000620709 CHKB-CPT1BH3BT56 60 aa7.91□□□□□ -1.14
CD40-207ENST00000620709 KRTAP10-10P60014 251 aa7.91□□□□□ -1.14
CD40-207ENST00000620709 MT1FP04733 61 aa7.9□□□□□ -1.14
CD40-207ENST00000620709 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.85□□□□□ -1.15
CD40-207ENST00000620709 H1FX-AS1Q4G0G2 97 aa7.84□□□□□ -1.15
CD40-207ENST00000620709 SMIM26A0A096LP01 95 aa7.83□□□□□ -1.16
CD40-207ENST00000620709 LCE2BO14633 110 aa7.83□□□□□ -1.16
CD40-207ENST00000620709 KRTAP9-7A8MTY7 169 aa7.81□□□□□ -1.16
CD40-207ENST00000620709 KRTAP9-3Q9BYQ3 159 aa7.81□□□□□ -1.16
CD40-207ENST00000620709 S4R3F8 94 aa7.79□□□□□ -1.16
CD40-207ENST00000620709 SPTSSBQ8NFR3 76 aa7.78□□□□□ -1.16
CD40-207ENST00000620709 KRTAP19-1Q8IUB9 90 aa7.78□□□□□ -1.16
CD40-207ENST00000620709 FCGBPQ9Y6R7 5405 aaPredicted RBP7.77□□□□□ -1.17
CD40-207ENST00000620709 LCA10Q71F78 164 aa7.74□□□□□ -1.17
CD40-207ENST00000620709 V9GYY9 64 aa7.71□□□□□ -1.18
CD40-207ENST00000620709 Q1T7F1 81 aa7.69□□□□□ -1.18
CD40-207ENST00000620709 KRTAP3-3Q9BYR6 98 aa7.69□□□□□ -1.18
CD40-207ENST00000620709 LINC01558Q9Y6Z2 57 aa7.66□□□□□ -1.18
CD40-207ENST00000620709 MACF1Q9UPN3 7388 aaKnown RBP7.63□□□□□ -1.19
CD40-207ENST00000620709 CSAG1Q6PB30 78 aa7.61□□□□□ -1.19
CD40-207ENST00000620709 SYNE2Q8WXH0 6885 aaKnown RBP7.59□□□□□ -1.19
CD40-207ENST00000620709 PRR15LQ9BU68 103 aa7.57□□□□□ -1.2
CD40-207ENST00000620709 A0A1B0GU69 56 aa7.56□□□□□ -1.2
CD40-207ENST00000620709 SEC61GP60059 68 aa7.55□□□□□ -1.2
CD40-207ENST00000620709 KRTAP19-6Q3LI70 58 aa7.55□□□□□ -1.2
CD40-207ENST00000620709 PSPHP1O15172 72 aa7.54□□□□□ -1.2
CD40-207ENST00000620709 Q5VV11 94 aa7.48□□□□□ -1.21
CD40-207ENST00000620709 H0YAA0 97 aa7.44□□□□□ -1.22
CD40-207ENST00000620709 ADM2Q7Z4H4 148 aa7.42□□□□□ -1.22
CD40-207ENST00000620709 KRTAP3-2Q9BYR7 98 aa7.4□□□□□ -1.22
CD40-207ENST00000620709 P0C880 135 aa7.35□□□□□ -1.23
CD40-207ENST00000620709 A6NED7 52 aa7.34□□□□□ -1.23
CD40-207ENST00000620709 A0A1B0GU33 70 aa7.33□□□□□ -1.24
CD40-207ENST00000620709 UQCR11O14957 56 aa7.32□□□□□ -1.24
CD40-207ENST00000620709 KRTAP6-3Q3LI67 103 aa7.28□□□□□ -1.24
CD40-207ENST00000620709 MIR22HGQ0VDD5 57 aa7.23□□□□□ -1.25
CD40-207ENST00000620709 A6NN06 94 aa7.22□□□□□ -1.25
CD40-207ENST00000620709 BRK1Q8WUW1 75 aa7.21□□□□□ -1.26
CD40-207ENST00000620709 M0QZ58 72 aa7.2□□□□□ -1.26
CD40-207ENST00000620709 SPATA8Q6RVD6 105 aa7.2□□□□□ -1.26
CD40-207ENST00000620709 CDC42SE1Q9NRR8 79 aa7.2□□□□□ -1.26
CD40-207ENST00000620709 MT1BP07438 61 aa7.19□□□□□ -1.26
CD40-207ENST00000620709 KRTAP13-4Q3LI77 160 aa7.17□□□□□ -1.26
CD40-207ENST00000620709 R4GN34 69 aa7.17□□□□□ -1.26
CD40-207ENST00000620709 SPRR2GQ9BYE4 73 aa7.17□□□□□ -1.26
CD40-207ENST00000620709 CRIPTQ9P021 101 aa7.15□□□□□ -1.27
CD40-207ENST00000620709 KRTAP19-8Q3LI54 63 aa7.14□□□□□ -1.27
CD40-207ENST00000620709 NEBP20929 6669 aa7.13□□□□□ -1.27
CD40-207ENST00000620709 A8MU10 97 aa7.11□□□□□ -1.27
CD40-207ENST00000620709 A0A0D9SG42 100 aa7.06□□□□□ -1.28
CD40-207ENST00000620709 KRTAP10-5P60370 271 aa7.06□□□□□ -1.28
CD40-207ENST00000620709 MUC12Q9UKN1 5478 aa7.03□□□□□ -1.28
CD40-207ENST00000620709 PRO0628Q9UI54 55 aa7.02□□□□□ -1.29
CD40-207ENST00000620709 LINC01554Q52M75 96 aa7.01□□□□□ -1.29
CD40-207ENST00000620709 K7ERS5 55 aa6.95□□□□□ -1.3
CD40-207ENST00000620709 KRTAP12-1P59990 96 aa6.91□□□□□ -1.3
CD40-207ENST00000620709 SPINT4Q6UDR6 99 aa6.91□□□□□ -1.3
CD40-207ENST00000620709 KRTAP12-2P59991 146 aa6.89□□□□□ -1.31
CD40-207ENST00000620709 KRTAP20-1Q3LI63 56 aa6.86□□□□□ -1.31
CD40-207ENST00000620709 KRTAP5-9P26371 169 aa6.85□□□□□ -1.31
CD40-207ENST00000620709 KMT2DO14686 5537 aa6.83□□□□□ -1.32
CD40-207ENST00000620709 MDN1Q9NU22 5596 aa6.82□□□□□ -1.32
CD40-207ENST00000620709 PMAIP1Q13794 54 aa6.81□□□□□ -1.32
CD40-207ENST00000620709 PLAC4Q8WY50 150 aa6.77□□□□□ -1.33
CD40-207ENST00000620709 PRO2289Q9P1D8 64 aa6.77□□□□□ -1.33
CD40-207ENST00000620709 MT1XP80297 61 aa6.71□□□□□ -1.33
CD40-207ENST00000620709 CAMK2N1Q7Z7J9 78 aa6.71□□□□□ -1.33
CD40-207ENST00000620709 SPRR2FQ96RM1 72 aa6.71□□□□□ -1.33
CD40-207ENST00000620709 SPRR2EP22531 72 aa6.66□□□□□ -1.34
CD40-207ENST00000620709 SPRR2BP35325 72 aa6.66□□□□□ -1.34
CD40-207ENST00000620709 SPRR2AP35326 72 aa6.66□□□□□ -1.34
CD40-207ENST00000620709 KRTAP8-1Q8IUC2 63 aa6.64□□□□□ -1.35
CD40-207ENST00000620709 ROMO1P60602 79 aa6.62□□□□□ -1.35
CD40-207ENST00000620709 KRTAP2-3P0C7H8 128 aa6.61□□□□□ -1.35
CD40-207ENST00000620709 KRTAP2-4Q9BYR9 128 aa6.61□□□□□ -1.35
CD40-207ENST00000620709 C10orf95Q9H7T3 257 aa6.54□□□□□ -1.36
CD40-207ENST00000620709 KTN1-AS1Q86SY8 53 aa6.52□□□□□ -1.37
CD40-207ENST00000620709 KRTAP4-8A0A0G2JLE6 195 aa6.5□□□□□ -1.37
CD40-207ENST00000620709 KRTAP4-8Q9BYQ9 185 aa6.5□□□□□ -1.37
CD40-207ENST00000620709 LCE1AQ5T7P2 110 aa6.49□□□□□ -1.37
CD40-207ENST00000620709 SPRR2DP22532 72 aa6.44□□□□□ -1.38
CD40-207ENST00000620709 KRTAP10-7P60409 375 aaPredicted RBP6.43□□□□□ -1.38
CD40-207ENST00000620709 KRTAP25-1Q3LHN0 102 aa6.4□□□□□ -1.39
CD40-207ENST00000620709 KRTAP2-2Q9BYT5 123 aa6.4□□□□□ -1.39
CD40-207ENST00000620709 KRTAP2-1Q9BYU5 128 aa6.4□□□□□ -1.39
CD40-207ENST00000620709 TNP1P09430 55 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms