RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 KRTAP9-2Q9BYQ4 174 aa6.56□□□□□ -1.36
NEK3-210ENST00000620675 LCA10Q71F78 164 aa6.54□□□□□ -1.36
NEK3-210ENST00000620675 KRTAP9-6A0A140TA67 174 aa6.54□□□□□ -1.36
NEK3-210ENST00000620675 S4R3F8 94 aa6.53□□□□□ -1.36
NEK3-210ENST00000620675 COX7CP15954 63 aa6.51□□□□□ -1.37
NEK3-210ENST00000620675 MT2AP02795 61 aa6.5□□□□□ -1.37
NEK3-210ENST00000620675 CYSTM1Q9H1C7 97 aa6.49□□□□□ -1.37
NEK3-210ENST00000620675 MT1FP04733 61 aa6.47□□□□□ -1.37
NEK3-210ENST00000620675 ANAPC13Q9BS18 74 aa6.47□□□□□ -1.37
NEK3-210ENST00000620675 DMAC1Q96GE9 116 aa6.46□□□□□ -1.37
NEK3-210ENST00000620675 A8MUN3 132 aa6.45□□□□□ -1.38
NEK3-210ENST00000620675 CSAG1Q6PB30 78 aa6.41□□□□□ -1.38
NEK3-210ENST00000620675 CCDC179H3BU77 68 aa6.4□□□□□ -1.38
NEK3-210ENST00000620675 KRTAP10-10P60014 251 aa6.4□□□□□ -1.39
NEK3-210ENST00000620675 SVIPQ8NHG7 77 aa6.38□□□□□ -1.39
NEK3-210ENST00000620675 H7BZZ5 65 aa6.37□□□□□ -1.39
NEK3-210ENST00000620675 NDUFC1O43677 76 aa6.36□□□□□ -1.39
NEK3-210ENST00000620675 SPANXA2-OT1Q8N9U9 137 aa6.36□□□□□ -1.39
NEK3-210ENST00000620675 ACYP2P14621 99 aa6.34□□□□□ -1.4
NEK3-210ENST00000620675 LCE3BQ5TA77 95 aa6.34□□□□□ -1.4
NEK3-210ENST00000620675 KRTAP9-3Q9BYQ3 159 aa6.34□□□□□ -1.4
NEK3-210ENST00000620675 FSIP2Q5CZC0 6907 aa6.33□□□□□ -1.4
NEK3-210ENST00000620675 USH2AO75445 5202 aa6.3□□□□□ -1.4
NEK3-210ENST00000620675 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
NEK3-210ENST00000620675 KRTAP9-9Q9BYP9 154 aa6.22□□□□□ -1.41
NEK3-210ENST00000620675 KRTAP9-4Q9BYQ2 154 aa6.22□□□□□ -1.41
NEK3-210ENST00000620675 CHKB-CPT1BH3BT56 60 aa6.22□□□□□ -1.41
NEK3-210ENST00000620675 ADM2Q7Z4H4 148 aa6.22□□□□□ -1.41
NEK3-210ENST00000620675 COA5Q86WW8 74 aa6.22□□□□□ -1.41
NEK3-210ENST00000620675 H0YAA0 97 aa6.19□□□□□ -1.42
NEK3-210ENST00000620675 KRTAP19-1Q8IUB9 90 aa6.19□□□□□ -1.42
NEK3-210ENST00000620675 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
NEK3-210ENST00000620675 P0C880 135 aa6.18□□□□□ -1.42
NEK3-210ENST00000620675 KRTAP4-12Q9BQ66 201 aa6.13□□□□□ -1.43
NEK3-210ENST00000620675 SPTSSBQ8NFR3 76 aa6.12□□□□□ -1.43
NEK3-210ENST00000620675 SPRR2GQ9BYE4 73 aa6.11□□□□□ -1.43
NEK3-210ENST00000620675 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
NEK3-210ENST00000620675 CRCT1Q9UGL9 99 aa6.08□□□□□ -1.44
NEK3-210ENST00000620675 TMEM258P61165 79 aa6.07□□□□□ -1.44
NEK3-210ENST00000620675 ATP5EP56381 51 aaPredicted RBP6.05□□□□□ -1.44
NEK3-210ENST00000620675 CRIPTQ9P021 101 aa6.05□□□□□ -1.44
NEK3-210ENST00000620675 MT1BP07438 61 aa6.02□□□□□ -1.45
NEK3-210ENST00000620675 KRTAP19-8Q3LI54 63 aa6.02□□□□□ -1.45
NEK3-210ENST00000620675 R4GN34 69 aa5.99□□□□□ -1.45
NEK3-210ENST00000620675 M0QZ58 72 aa5.98□□□□□ -1.45
NEK3-210ENST00000620675 FCGBPQ9Y6R7 5405 aaPredicted RBP5.97□□□□□ -1.45
NEK3-210ENST00000620675 Q5VV11 94 aa5.95□□□□□ -1.46
NEK3-210ENST00000620675 KRTAP13-4Q3LI77 160 aa5.94□□□□□ -1.46
NEK3-210ENST00000620675 LINC01554Q52M75 96 aa5.92□□□□□ -1.46
NEK3-210ENST00000620675 LCE1DQ5T752 114 aa5.92□□□□□ -1.46
NEK3-210ENST00000620675 KRTAP19-6Q3LI70 58 aa5.91□□□□□ -1.46
NEK3-210ENST00000620675 H3BS24 57 aa5.9□□□□□ -1.47
NEK3-210ENST00000620675 SERP1Q9Y6X1 66 aa5.89□□□□□ -1.47
NEK3-210ENST00000620675 SEC61GP60059 68 aa5.87□□□□□ -1.47
NEK3-210ENST00000620675 RPS28P62857 69 aaKnown RBP5.86□□□□□ -1.47
NEK3-210ENST00000620675 A0A1B0GU69 56 aa5.85□□□□□ -1.47
NEK3-210ENST00000620675 KRTAP4-2Q9BYR5 136 aa5.83□□□□□ -1.48
NEK3-210ENST00000620675 SPATA8Q6RVD6 105 aa5.83□□□□□ -1.48
NEK3-210ENST00000620675 KRTAP4-9Q9BYQ8 210 aa5.82□□□□□ -1.48
NEK3-210ENST00000620675 LINC01558Q9Y6Z2 57 aa5.82□□□□□ -1.48
NEK3-210ENST00000620675 A0A1B0GU33 70 aa5.81□□□□□ -1.48
NEK3-210ENST00000620675 KRTAP10-5P60370 271 aa5.76□□□□□ -1.49
NEK3-210ENST00000620675 PLAC4Q8WY50 150 aa5.76□□□□□ -1.49
NEK3-210ENST00000620675 A6NN06 94 aa5.76□□□□□ -1.49
NEK3-210ENST00000620675 A0A0D9SG42 100 aa5.75□□□□□ -1.49
NEK3-210ENST00000620675 MT1XP80297 61 aa5.73□□□□□ -1.49
NEK3-210ENST00000620675 PRR15LQ9BU68 103 aa5.71□□□□□ -1.49
NEK3-210ENST00000620675 A8MU10 97 aa5.7□□□□□ -1.5
NEK3-210ENST00000620675 MACF1Q9UPN3 7388 aaKnown RBP5.69□□□□□ -1.5
NEK3-210ENST00000620675 Q1T7F1 81 aa5.67□□□□□ -1.5
NEK3-210ENST00000620675 SMIM26A0A096LP01 95 aa5.67□□□□□ -1.5
NEK3-210ENST00000620675 PSPHP1O15172 72 aa5.67□□□□□ -1.5
NEK3-210ENST00000620675 KRTAP5-3Q6L8H2 238 aa5.66□□□□□ -1.5
NEK3-210ENST00000620675 KRTAP12-1P59990 96 aa5.63□□□□□ -1.51
NEK3-210ENST00000620675 KRTAP12-2P59991 146 aa5.62□□□□□ -1.51
NEK3-210ENST00000620675 KMT2DO14686 5537 aa5.62□□□□□ -1.51
NEK3-210ENST00000620675 SYNE2Q8WXH0 6885 aaKnown RBP5.61□□□□□ -1.51
NEK3-210ENST00000620675 SPINT4Q6UDR6 99 aa5.61□□□□□ -1.51
NEK3-210ENST00000620675 V9GYY9 64 aa5.6□□□□□ -1.51
NEK3-210ENST00000620675 PRO2289Q9P1D8 64 aa5.6□□□□□ -1.51
NEK3-210ENST00000620675 UQCR11O14957 56 aa5.58□□□□□ -1.52
NEK3-210ENST00000620675 PRO0628Q9UI54 55 aa5.57□□□□□ -1.52
NEK3-210ENST00000620675 CAMK2N1Q7Z7J9 78 aa5.55□□□□□ -1.52
NEK3-210ENST00000620675 KRTAP10-7P60409 375 aaPredicted RBP5.51□□□□□ -1.53
NEK3-210ENST00000620675 MIR22HGQ0VDD5 57 aa5.51□□□□□ -1.53
NEK3-210ENST00000620675 KRTAP4-11Q9BYQ6 195 aa5.51□□□□□ -1.53
NEK3-210ENST00000620675 KRTAP9-7A8MTY7 169 aa5.47□□□□□ -1.53
NEK3-210ENST00000620675 A6NED7 52 aa5.44□□□□□ -1.54
NEK3-210ENST00000620675 BRK1Q8WUW1 75 aa5.43□□□□□ -1.54
NEK3-210ENST00000620675 KRTAP10-12P60413 245 aa5.41□□□□□ -1.54
NEK3-210ENST00000620675 C10orf95Q9H7T3 257 aa5.38□□□□□ -1.55
NEK3-210ENST00000620675 MUC12Q9UKN1 5478 aa5.36□□□□□ -1.55
NEK3-210ENST00000620675 KRTAP6-3Q3LI67 103 aa5.36□□□□□ -1.55
NEK3-210ENST00000620675 KRTAP8-1Q8IUC2 63 aa5.3□□□□□ -1.56
NEK3-210ENST00000620675 KRTAP5-9P26371 169 aa5.28□□□□□ -1.56
NEK3-210ENST00000620675 MDN1Q9NU22 5596 aa5.28□□□□□ -1.56
NEK3-210ENST00000620675 CDC42SE1Q9NRR8 79 aa5.27□□□□□ -1.57
NEK3-210ENST00000620675 K7ERS5 55 aa5.24□□□□□ -1.57
NEK3-210ENST00000620675 PMAIP1Q13794 54 aa5.24□□□□□ -1.57
NEK3-210ENST00000620675 SPRR2FQ96RM1 72 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms