RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 KRTAP4-1Q9BYQ7 146 aa6.46□□□□□ -1.38
HERPUD2-207ENST00000603731 COA5Q86WW8 74 aa6.43□□□□□ -1.38
HERPUD2-207ENST00000603731 CHKB-CPT1BH3BT56 60 aa6.42□□□□□ -1.38
HERPUD2-207ENST00000603731 MPLKIPQ8TAP9 179 aa6.42□□□□□ -1.38
HERPUD2-207ENST00000603731 KRTAP3-1Q9BYR8 98 aa6.41□□□□□ -1.38
HERPUD2-207ENST00000603731 RPS28P62857 69 aaKnown RBP6.39□□□□□ -1.39
HERPUD2-207ENST00000603731 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.38□□□□□ -1.39
HERPUD2-207ENST00000603731 H1FX-AS1Q4G0G2 97 aa6.38□□□□□ -1.39
HERPUD2-207ENST00000603731 S4R3F8 94 aa6.33□□□□□ -1.4
HERPUD2-207ENST00000603731 SPTSSBQ8NFR3 76 aa6.32□□□□□ -1.4
HERPUD2-207ENST00000603731 SMIM26A0A096LP01 95 aa6.29□□□□□ -1.4
HERPUD2-207ENST00000603731 LCA10Q71F78 164 aa6.26□□□□□ -1.41
HERPUD2-207ENST00000603731 KRTAP19-2Q3LHN2 52 aa6.24□□□□□ -1.41
HERPUD2-207ENST00000603731 KRTAP3-3Q9BYR6 98 aa6.2□□□□□ -1.42
HERPUD2-207ENST00000603731 V9GYY9 64 aa6.2□□□□□ -1.42
HERPUD2-207ENST00000603731 CSAG1Q6PB30 78 aa6.19□□□□□ -1.42
HERPUD2-207ENST00000603731 Q1T7F1 81 aa6.16□□□□□ -1.42
HERPUD2-207ENST00000603731 LINC01558Q9Y6Z2 57 aa6.15□□□□□ -1.42
HERPUD2-207ENST00000603731 LCE2CQ5TA81 110 aa6.14□□□□□ -1.43
HERPUD2-207ENST00000603731 SEC61GP60059 68 aa6.13□□□□□ -1.43
HERPUD2-207ENST00000603731 A0A1B0GU69 56 aa6.12□□□□□ -1.43
HERPUD2-207ENST00000603731 PRR15LQ9BU68 103 aa6.11□□□□□ -1.43
HERPUD2-207ENST00000603731 M0R2T5 61 aa6.08□□□□□ -1.44
HERPUD2-207ENST00000603731 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
HERPUD2-207ENST00000603731 PSPHP1O15172 72 aa6.07□□□□□ -1.44
HERPUD2-207ENST00000603731 SSPOA2VEC9 5147 aa6.07□□□□□ -1.44
HERPUD2-207ENST00000603731 MT1HP80294 61 aa6.06□□□□□ -1.44
HERPUD2-207ENST00000603731 KRTAP10-6P60371 365 aaPredicted RBP6.05□□□□□ -1.44
HERPUD2-207ENST00000603731 ADM2Q7Z4H4 148 aa6.02□□□□□ -1.45
HERPUD2-207ENST00000603731 FCGBPQ9Y6R7 5405 aaPredicted RBP6.02□□□□□ -1.45
HERPUD2-207ENST00000603731 H0YAA0 97 aa6.01□□□□□ -1.45
HERPUD2-207ENST00000603731 FLGP20930 4061 aaPredicted RBP6□□□□□ -1.45
HERPUD2-207ENST00000603731 USH2AO75445 5202 aa6□□□□□ -1.45
HERPUD2-207ENST00000603731 Q5VV11 94 aa5.99□□□□□ -1.45
HERPUD2-207ENST00000603731 SYNE2Q8WXH0 6885 aaKnown RBP5.97□□□□□ -1.45
HERPUD2-207ENST00000603731 KRTAP3-2Q9BYR7 98 aa5.96□□□□□ -1.46
HERPUD2-207ENST00000603731 MACF1Q9UPN3 7388 aaKnown RBP5.95□□□□□ -1.46
HERPUD2-207ENST00000603731 A0A1B0GU33 70 aa5.94□□□□□ -1.46
HERPUD2-207ENST00000603731 P0C880 135 aa5.94□□□□□ -1.46
HERPUD2-207ENST00000603731 A6NED7 52 aa5.91□□□□□ -1.46
HERPUD2-207ENST00000603731 UQCR11O14957 56 aa5.9□□□□□ -1.46
HERPUD2-207ENST00000603731 M0QZ58 72 aa5.83□□□□□ -1.48
HERPUD2-207ENST00000603731 MIR22HGQ0VDD5 57 aa5.83□□□□□ -1.48
HERPUD2-207ENST00000603731 KRTAP19-1Q8IUB9 90 aa5.82□□□□□ -1.48
HERPUD2-207ENST00000603731 R4GN34 69 aa5.82□□□□□ -1.48
HERPUD2-207ENST00000603731 SPATA8Q6RVD6 105 aa5.81□□□□□ -1.48
HERPUD2-207ENST00000603731 KRTAP9-8Q9BYQ0 159 aa5.81□□□□□ -1.48
HERPUD2-207ENST00000603731 CRIPTQ9P021 101 aa5.81□□□□□ -1.48
HERPUD2-207ENST00000603731 MT2AP02795 61 aa5.8□□□□□ -1.48
HERPUD2-207ENST00000603731 KRTAP10-10P60014 251 aa5.8□□□□□ -1.48
HERPUD2-207ENST00000603731 BRK1Q8WUW1 75 aa5.78□□□□□ -1.48
HERPUD2-207ENST00000603731 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
HERPUD2-207ENST00000603731 CDC42SE1Q9NRR8 79 aa5.77□□□□□ -1.49
HERPUD2-207ENST00000603731 MT1FP04733 61 aa5.76□□□□□ -1.49
HERPUD2-207ENST00000603731 A0A0D9SG42 100 aa5.73□□□□□ -1.49
HERPUD2-207ENST00000603731 LINC01554Q52M75 96 aa5.72□□□□□ -1.49
HERPUD2-207ENST00000603731 A8MU10 97 aa5.71□□□□□ -1.5
HERPUD2-207ENST00000603731 KRTAP6-3Q3LI67 103 aa5.71□□□□□ -1.5
HERPUD2-207ENST00000603731 NEBP20929 6669 aa5.69□□□□□ -1.5
HERPUD2-207ENST00000603731 SPRR2GQ9BYE4 73 aa5.65□□□□□ -1.5
HERPUD2-207ENST00000603731 K7ERS5 55 aa5.64□□□□□ -1.51
HERPUD2-207ENST00000603731 KRTAP20-1Q3LI63 56 aa5.63□□□□□ -1.51
HERPUD2-207ENST00000603731 LCE2BO14633 110 aa5.62□□□□□ -1.51
HERPUD2-207ENST00000603731 SPINT4Q6UDR6 99 aa5.62□□□□□ -1.51
HERPUD2-207ENST00000603731 KRTAP9-3Q9BYQ3 159 aa5.61□□□□□ -1.51
HERPUD2-207ENST00000603731 PRO0628Q9UI54 55 aa5.59□□□□□ -1.51
HERPUD2-207ENST00000603731 A6NN06 94 aa5.58□□□□□ -1.52
HERPUD2-207ENST00000603731 KRTAP12-1P59990 96 aa5.58□□□□□ -1.52
HERPUD2-207ENST00000603731 KRTAP12-2P59991 146 aa5.55□□□□□ -1.52
HERPUD2-207ENST00000603731 PLAC4Q8WY50 150 aa5.53□□□□□ -1.52
HERPUD2-207ENST00000603731 KRTAP19-8Q3LI54 63 aa5.52□□□□□ -1.53
HERPUD2-207ENST00000603731 MUC12Q9UKN1 5478 aa5.51□□□□□ -1.53
HERPUD2-207ENST00000603731 KRTAP19-6Q3LI70 58 aa5.51□□□□□ -1.53
HERPUD2-207ENST00000603731 PMAIP1Q13794 54 aa5.47□□□□□ -1.53
HERPUD2-207ENST00000603731 CAMK2N1Q7Z7J9 78 aa5.47□□□□□ -1.53
HERPUD2-207ENST00000603731 MT1BP07438 61 aa5.44□□□□□ -1.54
HERPUD2-207ENST00000603731 ROMO1P60602 79 aa5.34□□□□□ -1.55
HERPUD2-207ENST00000603731 KMT2DO14686 5537 aa5.3□□□□□ -1.56
HERPUD2-207ENST00000603731 MDN1Q9NU22 5596 aa5.29□□□□□ -1.56
HERPUD2-207ENST00000603731 C10orf95Q9H7T3 257 aa5.28□□□□□ -1.56
HERPUD2-207ENST00000603731 PRO2289Q9P1D8 64 aa5.28□□□□□ -1.56
HERPUD2-207ENST00000603731 KRTAP2-3P0C7H8 128 aa5.27□□□□□ -1.57
HERPUD2-207ENST00000603731 KRTAP2-4Q9BYR9 128 aa5.27□□□□□ -1.57
HERPUD2-207ENST00000603731 MT1XP80297 61 aa5.24□□□□□ -1.57
HERPUD2-207ENST00000603731 KRTAP10-5P60370 271 aa5.23□□□□□ -1.57
HERPUD2-207ENST00000603731 GPR98Q8WXG9 6306 aa5.2□□□□□ -1.58
HERPUD2-207ENST00000603731 KTN1-AS1Q86SY8 53 aa5.2□□□□□ -1.58
HERPUD2-207ENST00000603731 TNP1P09430 55 aa5.19□□□□□ -1.58
HERPUD2-207ENST00000603731 KRTAP25-1Q3LHN0 102 aa5.17□□□□□ -1.58
HERPUD2-207ENST00000603731 KRTAP5-9P26371 169 aa5.15□□□□□ -1.59
HERPUD2-207ENST00000603731 PRAC1Q96KF2 57 aa5.1□□□□□ -1.59
HERPUD2-207ENST00000603731 SVIPQ8NHG7 77 aa5.08□□□□□ -1.6
HERPUD2-207ENST00000603731 KRTAP2-2Q9BYT5 123 aa5.06□□□□□ -1.6
HERPUD2-207ENST00000603731 KRTAP2-1Q9BYU5 128 aa5.06□□□□□ -1.6
HERPUD2-207ENST00000603731 KRTAP10-7P60409 375 aaPredicted RBP5.03□□□□□ -1.6
HERPUD2-207ENST00000603731 KRTAP10-12P60413 245 aa5□□□□□ -1.61
HERPUD2-207ENST00000603731 PP632Q6XCG6 107 aa4.99□□□□□ -1.61
HERPUD2-207ENST00000603731 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
HERPUD2-207ENST00000603731 SPRR2EP22531 72 aa4.94□□□□□ -1.62
HERPUD2-207ENST00000603731 SPRR2BP35325 72 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms