RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-227ENST00000600026 SPANXA2-OT1Q8N9U9 137 aa10.79□□□□□ -0.68
LTBP4-227ENST00000600026 LORP23490 312 aaPredicted RBP10.76□□□□□ -0.69
LTBP4-227ENST00000600026 DMAC1Q96GE9 116 aa10.76□□□□□ -0.69
LTBP4-227ENST00000600026 H7BZZ5 65 aa10.74□□□□□ -0.69
LTBP4-227ENST00000600026 CYSTM1Q9H1C7 97 aa10.74□□□□□ -0.69
LTBP4-227ENST00000600026 S4R3F8 94 aa10.72□□□□□ -0.69
LTBP4-227ENST00000600026 ACYP2P14621 99 aa10.68□□□□□ -0.7
LTBP4-227ENST00000600026 LCA10Q71F78 164 aa10.62□□□□□ -0.71
LTBP4-227ENST00000600026 PCP4P48539 62 aa10.6□□□□□ -0.71
LTBP4-227ENST00000600026 KRTAP9-7A8MTY7 169 aa10.58□□□□□ -0.72
LTBP4-227ENST00000600026 CSAG1Q6PB30 78 aa10.55□□□□□ -0.72
LTBP4-227ENST00000600026 KRTAP9-8Q9BYQ0 159 aa10.55□□□□□ -0.72
LTBP4-227ENST00000600026 ATP5EP56381 51 aaPredicted RBP10.53□□□□□ -0.72
LTBP4-227ENST00000600026 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.52□□□□□ -0.73
LTBP4-227ENST00000600026 CHKB-CPT1BH3BT56 60 aa10.52□□□□□ -0.73
LTBP4-227ENST00000600026 TMEM258P61165 79 aa10.52□□□□□ -0.73
LTBP4-227ENST00000600026 KRTAP3-3Q9BYR6 98 aa10.5□□□□□ -0.73
LTBP4-227ENST00000600026 MT2AP02795 61 aa10.47□□□□□ -0.73
LTBP4-227ENST00000600026 COA5Q86WW8 74 aa10.44□□□□□ -0.74
LTBP4-227ENST00000600026 SPTSSBQ8NFR3 76 aa10.44□□□□□ -0.74
LTBP4-227ENST00000600026 MT1FP04733 61 aa10.4□□□□□ -0.74
LTBP4-227ENST00000600026 KRTAP10-10P60014 251 aa10.34□□□□□ -0.75
LTBP4-227ENST00000600026 SSPOA2VEC9 5147 aa10.32□□□□□ -0.76
LTBP4-227ENST00000600026 USH2AO75445 5202 aa10.27□□□□□ -0.77
LTBP4-227ENST00000600026 H0YAA0 97 aa10.23□□□□□ -0.77
LTBP4-227ENST00000600026 KRTAP9-3Q9BYQ3 159 aa10.2□□□□□ -0.78
LTBP4-227ENST00000600026 SERP1Q9Y6X1 66 aa10.19□□□□□ -0.78
LTBP4-227ENST00000600026 ADM2Q7Z4H4 148 aa10.16□□□□□ -0.78
LTBP4-227ENST00000600026 FCGBPQ9Y6R7 5405 aaPredicted RBP10.1□□□□□ -0.79
LTBP4-227ENST00000600026 LCE2BO14633 110 aa10.06□□□□□ -0.8
LTBP4-227ENST00000600026 SEC61GP60059 68 aa10.04□□□□□ -0.8
LTBP4-227ENST00000600026 KRTAP3-2Q9BYR7 98 aa10.02□□□□□ -0.81
LTBP4-227ENST00000600026 CRIPTQ9P021 101 aa10□□□□□ -0.81
LTBP4-227ENST00000600026 P0C880 135 aa9.99□□□□□ -0.81
LTBP4-227ENST00000600026 RPS28P62857 69 aaKnown RBP9.94□□□□□ -0.82
LTBP4-227ENST00000600026 KRTAP19-1Q8IUB9 90 aa9.94□□□□□ -0.82
LTBP4-227ENST00000600026 A0A1B0GU69 56 aa9.92□□□□□ -0.82
LTBP4-227ENST00000600026 SYNE2Q8WXH0 6885 aaKnown RBP9.91□□□□□ -0.82
LTBP4-227ENST00000600026 LINC01558Q9Y6Z2 57 aa9.9□□□□□ -0.82
LTBP4-227ENST00000600026 MACF1Q9UPN3 7388 aaKnown RBP9.88□□□□□ -0.83
LTBP4-227ENST00000600026 PRR15LQ9BU68 103 aa9.87□□□□□ -0.83
LTBP4-227ENST00000600026 R4GN34 69 aa9.87□□□□□ -0.83
LTBP4-227ENST00000600026 SMIM26A0A096LP01 95 aa9.86□□□□□ -0.83
LTBP4-227ENST00000600026 SPRR2GQ9BYE4 73 aa9.85□□□□□ -0.83
LTBP4-227ENST00000600026 V9GYY9 64 aa9.83□□□□□ -0.84
LTBP4-227ENST00000600026 M0QZ58 72 aa9.82□□□□□ -0.84
LTBP4-227ENST00000600026 Q1T7F1 81 aa9.76□□□□□ -0.85
LTBP4-227ENST00000600026 A0A1B0GU33 70 aa9.75□□□□□ -0.85
LTBP4-227ENST00000600026 KRTAP19-8Q3LI54 63 aa9.72□□□□□ -0.85
LTBP4-227ENST00000600026 Q5VV11 94 aa9.68□□□□□ -0.86
LTBP4-227ENST00000600026 MT1BP07438 61 aa9.67□□□□□ -0.86
LTBP4-227ENST00000600026 LINC01554Q52M75 96 aa9.63□□□□□ -0.87
LTBP4-227ENST00000600026 KRTAP19-6Q3LI70 58 aa9.62□□□□□ -0.87
LTBP4-227ENST00000600026 KRTAP13-4Q3LI77 160 aa9.62□□□□□ -0.87
LTBP4-227ENST00000600026 PSPHP1O15172 72 aa9.61□□□□□ -0.87
LTBP4-227ENST00000600026 SPATA8Q6RVD6 105 aa9.58□□□□□ -0.88
LTBP4-227ENST00000600026 UQCR11O14957 56 aa9.53□□□□□ -0.88
LTBP4-227ENST00000600026 KRTAP6-3Q3LI67 103 aa9.53□□□□□ -0.88
LTBP4-227ENST00000600026 PLAC4Q8WY50 150 aa9.49□□□□□ -0.89
LTBP4-227ENST00000600026 A0A0D9SG42 100 aa9.46□□□□□ -0.9
LTBP4-227ENST00000600026 A6NN06 94 aa9.46□□□□□ -0.9
LTBP4-227ENST00000600026 MIR22HGQ0VDD5 57 aa9.38□□□□□ -0.91
LTBP4-227ENST00000600026 NEBP20929 6669 aa9.37□□□□□ -0.91
LTBP4-227ENST00000600026 A8MU10 97 aa9.36□□□□□ -0.91
LTBP4-227ENST00000600026 A6NED7 52 aa9.35□□□□□ -0.91
LTBP4-227ENST00000600026 KRTAP10-5P60370 271 aa9.34□□□□□ -0.91
LTBP4-227ENST00000600026 SPINT4Q6UDR6 99 aa9.3□□□□□ -0.92
LTBP4-227ENST00000600026 KRTAP12-1P59990 96 aa9.26□□□□□ -0.93
LTBP4-227ENST00000600026 MUC12Q9UKN1 5478 aa9.23□□□□□ -0.93
LTBP4-227ENST00000600026 KRTAP12-2P59991 146 aa9.2□□□□□ -0.94
LTBP4-227ENST00000600026 CAMK2N1Q7Z7J9 78 aa9.2□□□□□ -0.94
LTBP4-227ENST00000600026 MT1XP80297 61 aa9.18□□□□□ -0.94
LTBP4-227ENST00000600026 KRTAP20-1Q3LI63 56 aa9.18□□□□□ -0.94
LTBP4-227ENST00000600026 PRO2289Q9P1D8 64 aa9.18□□□□□ -0.94
LTBP4-227ENST00000600026 K7ERS5 55 aa9.11□□□□□ -0.95
LTBP4-227ENST00000600026 CDC42SE1Q9NRR8 79 aa9.11□□□□□ -0.95
LTBP4-227ENST00000600026 BRK1Q8WUW1 75 aa8.88□□□□□ -0.99
LTBP4-227ENST00000600026 KMT2DO14686 5537 aa8.82□□□□□ -1
LTBP4-227ENST00000600026 MDN1Q9NU22 5596 aa8.8□□□□□ -1
LTBP4-227ENST00000600026 KRTAP5-9P26371 169 aa8.78□□□□□ -1
LTBP4-227ENST00000600026 KRTAP10-7P60409 375 aaPredicted RBP8.78□□□□□ -1
LTBP4-227ENST00000600026 C10orf95Q9H7T3 257 aa8.78□□□□□ -1
LTBP4-227ENST00000600026 KRTAP2-3P0C7H8 128 aa8.72□□□□□ -1.01
LTBP4-227ENST00000600026 KRTAP10-12P60413 245 aa8.72□□□□□ -1.01
LTBP4-227ENST00000600026 KRTAP2-4Q9BYR9 128 aa8.72□□□□□ -1.01
LTBP4-227ENST00000600026 TNP1P09430 55 aa8.67□□□□□ -1.02
LTBP4-227ENST00000600026 KRTAP4-8A0A0G2JLE6 195 aa8.63□□□□□ -1.03
LTBP4-227ENST00000600026 KRTAP4-8Q9BYQ9 185 aa8.63□□□□□ -1.03
LTBP4-227ENST00000600026 KRTAP8-1Q8IUC2 63 aa8.61□□□□□ -1.03
LTBP4-227ENST00000600026 ROMO1P60602 79 aa8.59□□□□□ -1.03
LTBP4-227ENST00000600026 KRTAP25-1Q3LHN0 102 aa8.54□□□□□ -1.04
LTBP4-227ENST00000600026 SPRR2FQ96RM1 72 aa8.49□□□□□ -1.05
LTBP4-227ENST00000600026 PRO0628Q9UI54 55 aa8.44□□□□□ -1.06
LTBP4-227ENST00000600026 SPRR2EP22531 72 aa8.41□□□□□ -1.06
LTBP4-227ENST00000600026 SPRR2BP35325 72 aa8.41□□□□□ -1.06
LTBP4-227ENST00000600026 SPRR2AP35326 72 aa8.41□□□□□ -1.06
LTBP4-227ENST00000600026 KRTAP2-2Q9BYT5 123 aa8.41□□□□□ -1.06
LTBP4-227ENST00000600026 KRTAP2-1Q9BYU5 128 aa8.41□□□□□ -1.06
LTBP4-227ENST00000600026 PMAIP1Q13794 54 aa8.4□□□□□ -1.06
LTBP4-227ENST00000600026 LCE3AQ5TA76 89 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms