RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 H7BZZ5 65 aa4.58□□□□□ -1.68
ZNF548-206ENST00000597047 RPS28P62857 69 aaKnown RBP4.56□□□□□ -1.68
ZNF548-206ENST00000597047 KRTAP3-1Q9BYR8 98 aa4.56□□□□□ -1.68
ZNF548-206ENST00000597047 S4R3F8 94 aa4.54□□□□□ -1.68
ZNF548-206ENST00000597047 KRTAP10-6P60371 365 aaPredicted RBP4.53□□□□□ -1.68
ZNF548-206ENST00000597047 SPANXA2-OT1Q8N9U9 137 aa4.53□□□□□ -1.68
ZNF548-206ENST00000597047 KRTAP9-7A8MTY7 169 aa4.51□□□□□ -1.69
ZNF548-206ENST00000597047 TMEM258P61165 79 aa4.51□□□□□ -1.69
ZNF548-206ENST00000597047 DMAC1Q96GE9 116 aa4.5□□□□□ -1.69
ZNF548-206ENST00000597047 LCA10Q71F78 164 aa4.49□□□□□ -1.69
ZNF548-206ENST00000597047 A8MUN3 132 aa4.48□□□□□ -1.69
ZNF548-206ENST00000597047 ACYP2P14621 99 aa4.48□□□□□ -1.69
ZNF548-206ENST00000597047 LORP23490 312 aaPredicted RBP4.48□□□□□ -1.69
ZNF548-206ENST00000597047 ATP5EP56381 51 aaPredicted RBP4.48□□□□□ -1.69
ZNF548-206ENST00000597047 CSAG1Q6PB30 78 aa4.46□□□□□ -1.7
ZNF548-206ENST00000597047 CHKB-CPT1BH3BT56 60 aa4.45□□□□□ -1.7
ZNF548-206ENST00000597047 KRTAP10-10P60014 251 aa4.44□□□□□ -1.7
ZNF548-206ENST00000597047 COA5Q86WW8 74 aa4.44□□□□□ -1.7
ZNF548-206ENST00000597047 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
ZNF548-206ENST00000597047 MT2AP02795 61 aa4.42□□□□□ -1.7
ZNF548-206ENST00000597047 KRTAP9-8Q9BYQ0 159 aa4.42□□□□□ -1.7
ZNF548-206ENST00000597047 KRTAP3-3Q9BYR6 98 aa4.4□□□□□ -1.71
ZNF548-206ENST00000597047 MT1FP04733 61 aa4.38□□□□□ -1.71
ZNF548-206ENST00000597047 SERP1Q9Y6X1 66 aa4.38□□□□□ -1.71
ZNF548-206ENST00000597047 SPTSSBQ8NFR3 76 aa4.35□□□□□ -1.71
ZNF548-206ENST00000597047 PRO0628Q9UI54 55 aa4.34□□□□□ -1.71
ZNF548-206ENST00000597047 ADM2Q7Z4H4 148 aa4.32□□□□□ -1.72
ZNF548-206ENST00000597047 KRTAP9-3Q9BYQ3 159 aa4.27□□□□□ -1.73
ZNF548-206ENST00000597047 SEC61GP60059 68 aa4.26□□□□□ -1.73
ZNF548-206ENST00000597047 SMIM26A0A096LP01 95 aa4.25□□□□□ -1.73
ZNF548-206ENST00000597047 V9GYY9 64 aa4.24□□□□□ -1.73
ZNF548-206ENST00000597047 H0YAA0 97 aa4.23□□□□□ -1.73
ZNF548-206ENST00000597047 LCE2BO14633 110 aa4.22□□□□□ -1.73
ZNF548-206ENST00000597047 P0C880 135 aa4.22□□□□□ -1.73
ZNF548-206ENST00000597047 A0A1B0GU69 56 aa4.21□□□□□ -1.74
ZNF548-206ENST00000597047 LINC01558Q9Y6Z2 57 aa4.2□□□□□ -1.74
ZNF548-206ENST00000597047 USH2AO75445 5202 aa4.18□□□□□ -1.74
ZNF548-206ENST00000597047 PRR15LQ9BU68 103 aa4.18□□□□□ -1.74
ZNF548-206ENST00000597047 KRTAP3-2Q9BYR7 98 aa4.18□□□□□ -1.74
ZNF548-206ENST00000597047 CRIPTQ9P021 101 aa4.18□□□□□ -1.74
ZNF548-206ENST00000597047 R4GN34 69 aa4.18□□□□□ -1.74
ZNF548-206ENST00000597047 M0QZ58 72 aa4.17□□□□□ -1.74
ZNF548-206ENST00000597047 Q1T7F1 81 aa4.17□□□□□ -1.74
ZNF548-206ENST00000597047 KRTAP19-1Q8IUB9 90 aa4.17□□□□□ -1.74
ZNF548-206ENST00000597047 PSPHP1O15172 72 aa4.16□□□□□ -1.74
ZNF548-206ENST00000597047 LINC01554Q52M75 96 aa4.16□□□□□ -1.74
ZNF548-206ENST00000597047 SPRR2GQ9BYE4 73 aa4.14□□□□□ -1.75
ZNF548-206ENST00000597047 FCGBPQ9Y6R7 5405 aaPredicted RBP4.13□□□□□ -1.75
ZNF548-206ENST00000597047 Q5VV11 94 aa4.13□□□□□ -1.75
ZNF548-206ENST00000597047 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
ZNF548-206ENST00000597047 SSPOA2VEC9 5147 aa4.12□□□□□ -1.75
ZNF548-206ENST00000597047 A0A1B0GU33 70 aa4.1□□□□□ -1.75
ZNF548-206ENST00000597047 PMAIP1Q13794 54 aa4.08□□□□□ -1.76
ZNF548-206ENST00000597047 KRTAP19-8Q3LI54 63 aa4.07□□□□□ -1.76
ZNF548-206ENST00000597047 MT1BP07438 61 aa4.06□□□□□ -1.76
ZNF548-206ENST00000597047 SPATA8Q6RVD6 105 aa4.06□□□□□ -1.76
ZNF548-206ENST00000597047 PLAC4Q8WY50 150 aa4.06□□□□□ -1.76
ZNF548-206ENST00000597047 KRTAP13-4Q3LI77 160 aa4.05□□□□□ -1.76
ZNF548-206ENST00000597047 UQCR11O14957 56 aa4.04□□□□□ -1.76
ZNF548-206ENST00000597047 A0A0D9SG42 100 aa4.03□□□□□ -1.76
ZNF548-206ENST00000597047 A6NED7 52 aa4.03□□□□□ -1.76
ZNF548-206ENST00000597047 MACF1Q9UPN3 7388 aaKnown RBP4.02□□□□□ -1.77
ZNF548-206ENST00000597047 BRK1Q8WUW1 75 aa4.01□□□□□ -1.77
ZNF548-206ENST00000597047 MIR22HGQ0VDD5 57 aa4□□□□□ -1.77
ZNF548-206ENST00000597047 KRTAP19-6Q3LI70 58 aa4□□□□□ -1.77
ZNF548-206ENST00000597047 A6NN06 94 aa3.99□□□□□ -1.77
ZNF548-206ENST00000597047 A8MU10 97 aa3.99□□□□□ -1.77
ZNF548-206ENST00000597047 KRTAP6-3Q3LI67 103 aa3.96□□□□□ -1.78
ZNF548-206ENST00000597047 SPINT4Q6UDR6 99 aa3.96□□□□□ -1.78
ZNF548-206ENST00000597047 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
ZNF548-206ENST00000597047 CAMK2N1Q7Z7J9 78 aa3.92□□□□□ -1.78
ZNF548-206ENST00000597047 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
ZNF548-206ENST00000597047 CDC42SE1Q9NRR8 79 aa3.91□□□□□ -1.78
ZNF548-206ENST00000597047 PRO2289Q9P1D8 64 aa3.91□□□□□ -1.78
ZNF548-206ENST00000597047 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.79
ZNF548-206ENST00000597047 KRTAP12-1P59990 96 aa3.88□□□□□ -1.79
ZNF548-206ENST00000597047 KRTAP12-2P59991 146 aa3.88□□□□□ -1.79
ZNF548-206ENST00000597047 MT1XP80297 61 aa3.87□□□□□ -1.79
ZNF548-206ENST00000597047 NEBP20929 6669 aa3.86□□□□□ -1.79
ZNF548-206ENST00000597047 K7ERS5 55 aa3.85□□□□□ -1.79
ZNF548-206ENST00000597047 MUC12Q9UKN1 5478 aa3.76□□□□□ -1.81
ZNF548-206ENST00000597047 KRTAP10-7P60409 375 aaPredicted RBP3.74□□□□□ -1.81
ZNF548-206ENST00000597047 KMT2DO14686 5537 aa3.69□□□□□ -1.82
ZNF548-206ENST00000597047 KRTAP4-8A0A0G2JLE6 195 aa3.68□□□□□ -1.82
ZNF548-206ENST00000597047 H3BS24 57 aa3.68□□□□□ -1.82
ZNF548-206ENST00000597047 KRTAP2-3P0C7H8 128 aa3.68□□□□□ -1.82
ZNF548-206ENST00000597047 KRTAP4-8Q9BYQ9 185 aa3.68□□□□□ -1.82
ZNF548-206ENST00000597047 KRTAP2-4Q9BYR9 128 aa3.68□□□□□ -1.82
ZNF548-206ENST00000597047 C10orf95Q9H7T3 257 aa3.68□□□□□ -1.82
ZNF548-206ENST00000597047 KRTAP8-1Q8IUC2 63 aa3.67□□□□□ -1.82
ZNF548-206ENST00000597047 KRTAP10-12P60413 245 aa3.66□□□□□ -1.82
ZNF548-206ENST00000597047 ROMO1P60602 79 aa3.66□□□□□ -1.82
ZNF548-206ENST00000597047 TNP1P09430 55 aa3.63□□□□□ -1.83
ZNF548-206ENST00000597047 SPRR2FQ96RM1 72 aa3.61□□□□□ -1.83
ZNF548-206ENST00000597047 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
ZNF548-206ENST00000597047 KRTAP5-9P26371 169 aa3.56□□□□□ -1.84
ZNF548-206ENST00000597047 KRTAP25-1Q3LHN0 102 aa3.56□□□□□ -1.84
ZNF548-206ENST00000597047 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
ZNF548-206ENST00000597047 KRTAP2-2Q9BYT5 123 aa3.53□□□□□ -1.84
ZNF548-206ENST00000597047 KRTAP2-1Q9BYU5 128 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms