RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 ACYP2P14621 99 aa6.6□□□□□ -1.35
SHKBP1-209ENST00000595803 DMAC1Q96GE9 116 aa6.59□□□□□ -1.35
SHKBP1-209ENST00000595803 KRTAP3-1Q9BYR8 98 aa6.58□□□□□ -1.36
SHKBP1-209ENST00000595803 LCE2CQ5TA81 110 aa6.57□□□□□ -1.36
SHKBP1-209ENST00000595803 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
SHKBP1-209ENST00000595803 MT1HP80294 61 aa6.55□□□□□ -1.36
SHKBP1-209ENST00000595803 H1FX-AS1Q4G0G2 97 aa6.55□□□□□ -1.36
SHKBP1-209ENST00000595803 KRTAP10-6P60371 365 aaPredicted RBP6.52□□□□□ -1.37
SHKBP1-209ENST00000595803 CHKB-CPT1BH3BT56 60 aa6.5□□□□□ -1.37
SHKBP1-209ENST00000595803 KRTAP19-2Q3LHN2 52 aa6.49□□□□□ -1.37
SHKBP1-209ENST00000595803 COA5Q86WW8 74 aa6.49□□□□□ -1.37
SHKBP1-209ENST00000595803 SERP1Q9Y6X1 66 aa6.47□□□□□ -1.37
SHKBP1-209ENST00000595803 S4R3F8 94 aa6.46□□□□□ -1.38
SHKBP1-209ENST00000595803 SSPOA2VEC9 5147 aa6.42□□□□□ -1.38
SHKBP1-209ENST00000595803 FCGBPQ9Y6R7 5405 aaPredicted RBP6.41□□□□□ -1.38
SHKBP1-209ENST00000595803 LCA10Q71F78 164 aa6.41□□□□□ -1.38
SHKBP1-209ENST00000595803 SPTSSBQ8NFR3 76 aa6.41□□□□□ -1.38
SHKBP1-209ENST00000595803 USH2AO75445 5202 aa6.41□□□□□ -1.38
SHKBP1-209ENST00000595803 RPS28P62857 69 aaKnown RBP6.39□□□□□ -1.39
SHKBP1-209ENST00000595803 M0R2T5 61 aa6.36□□□□□ -1.39
SHKBP1-209ENST00000595803 CSAG1Q6PB30 78 aa6.36□□□□□ -1.39
SHKBP1-209ENST00000595803 MACF1Q9UPN3 7388 aaKnown RBP6.36□□□□□ -1.39
SHKBP1-209ENST00000595803 KRTAP3-3Q9BYR6 98 aa6.35□□□□□ -1.39
SHKBP1-209ENST00000595803 SYNE2Q8WXH0 6885 aaKnown RBP6.35□□□□□ -1.39
SHKBP1-209ENST00000595803 SMIM26A0A096LP01 95 aa6.29□□□□□ -1.4
SHKBP1-209ENST00000595803 FLGP20930 4061 aaPredicted RBP6.28□□□□□ -1.4
SHKBP1-209ENST00000595803 KRTAP19-1Q8IUB9 90 aa6.24□□□□□ -1.41
SHKBP1-209ENST00000595803 SEC61GP60059 68 aa6.21□□□□□ -1.42
SHKBP1-209ENST00000595803 V9GYY9 64 aa6.21□□□□□ -1.42
SHKBP1-209ENST00000595803 LINC01558Q9Y6Z2 57 aa6.2□□□□□ -1.42
SHKBP1-209ENST00000595803 A0A1B0GU69 56 aa6.18□□□□□ -1.42
SHKBP1-209ENST00000595803 Q1T7F1 81 aa6.18□□□□□ -1.42
SHKBP1-209ENST00000595803 ADM2Q7Z4H4 148 aa6.16□□□□□ -1.42
SHKBP1-209ENST00000595803 PRR15LQ9BU68 103 aa6.16□□□□□ -1.42
SHKBP1-209ENST00000595803 H0YAA0 97 aa6.15□□□□□ -1.42
SHKBP1-209ENST00000595803 KRTAP6-3Q3LI67 103 aa6.1□□□□□ -1.43
SHKBP1-209ENST00000595803 KRTAP3-2Q9BYR7 98 aa6.1□□□□□ -1.43
SHKBP1-209ENST00000595803 PSPHP1O15172 72 aa6.08□□□□□ -1.44
SHKBP1-209ENST00000595803 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
SHKBP1-209ENST00000595803 P0C880 135 aa6.06□□□□□ -1.44
SHKBP1-209ENST00000595803 LCE2BO14633 110 aa6.05□□□□□ -1.44
SHKBP1-209ENST00000595803 A0A1B0GU33 70 aa6.03□□□□□ -1.44
SHKBP1-209ENST00000595803 MT2AP02795 61 aa6.02□□□□□ -1.45
SHKBP1-209ENST00000595803 NEBP20929 6669 aa6.02□□□□□ -1.45
SHKBP1-209ENST00000595803 KRTAP10-10P60014 251 aa6.01□□□□□ -1.45
SHKBP1-209ENST00000595803 KRTAP20-1Q3LI63 56 aa6.01□□□□□ -1.45
SHKBP1-209ENST00000595803 Q5VV11 94 aa6□□□□□ -1.45
SHKBP1-209ENST00000595803 CRIPTQ9P021 101 aa5.98□□□□□ -1.45
SHKBP1-209ENST00000595803 MT1FP04733 61 aa5.97□□□□□ -1.45
SHKBP1-209ENST00000595803 M0QZ58 72 aa5.95□□□□□ -1.46
SHKBP1-209ENST00000595803 UQCR11O14957 56 aa5.95□□□□□ -1.46
SHKBP1-209ENST00000595803 R4GN34 69 aa5.95□□□□□ -1.46
SHKBP1-209ENST00000595803 KRTAP19-6Q3LI70 58 aa5.94□□□□□ -1.46
SHKBP1-209ENST00000595803 A6NED7 52 aa5.92□□□□□ -1.46
SHKBP1-209ENST00000595803 KRTAP9-3Q9BYQ3 159 aa5.91□□□□□ -1.46
SHKBP1-209ENST00000595803 SPATA8Q6RVD6 105 aa5.9□□□□□ -1.46
SHKBP1-209ENST00000595803 MIR22HGQ0VDD5 57 aa5.88□□□□□ -1.47
SHKBP1-209ENST00000595803 KRTAP13-4Q3LI77 160 aa5.87□□□□□ -1.47
SHKBP1-209ENST00000595803 MUC12Q9UKN1 5478 aa5.86□□□□□ -1.47
SHKBP1-209ENST00000595803 LINC01554Q52M75 96 aa5.84□□□□□ -1.47
SHKBP1-209ENST00000595803 SPRR2GQ9BYE4 73 aa5.83□□□□□ -1.48
SHKBP1-209ENST00000595803 A0A0D9SG42 100 aa5.81□□□□□ -1.48
SHKBP1-209ENST00000595803 A8MU10 97 aa5.79□□□□□ -1.48
SHKBP1-209ENST00000595803 CDC42SE1Q9NRR8 79 aa5.77□□□□□ -1.49
SHKBP1-209ENST00000595803 BRK1Q8WUW1 75 aa5.73□□□□□ -1.49
SHKBP1-209ENST00000595803 SPINT4Q6UDR6 99 aa5.72□□□□□ -1.49
SHKBP1-209ENST00000595803 KRTAP19-8Q3LI54 63 aa5.71□□□□□ -1.5
SHKBP1-209ENST00000595803 A6NN06 94 aa5.7□□□□□ -1.5
SHKBP1-209ENST00000595803 PLAC4Q8WY50 150 aa5.69□□□□□ -1.5
SHKBP1-209ENST00000595803 K7ERS5 55 aa5.68□□□□□ -1.5
SHKBP1-209ENST00000595803 KRTAP12-1P59990 96 aa5.67□□□□□ -1.5
SHKBP1-209ENST00000595803 MDN1Q9NU22 5596 aa5.65□□□□□ -1.5
SHKBP1-209ENST00000595803 KRTAP12-2P59991 146 aa5.64□□□□□ -1.51
SHKBP1-209ENST00000595803 KRTAP2-3P0C7H8 128 aa5.63□□□□□ -1.51
SHKBP1-209ENST00000595803 KRTAP2-4Q9BYR9 128 aa5.63□□□□□ -1.51
SHKBP1-209ENST00000595803 MT1BP07438 61 aa5.62□□□□□ -1.51
SHKBP1-209ENST00000595803 KMT2DO14686 5537 aa5.61□□□□□ -1.51
SHKBP1-209ENST00000595803 CAMK2N1Q7Z7J9 78 aa5.58□□□□□ -1.52
SHKBP1-209ENST00000595803 KRTAP5-9P26371 169 aa5.55□□□□□ -1.52
SHKBP1-209ENST00000595803 PRO0628Q9UI54 55 aa5.52□□□□□ -1.53
SHKBP1-209ENST00000595803 PRO2289Q9P1D8 64 aa5.44□□□□□ -1.54
SHKBP1-209ENST00000595803 PMAIP1Q13794 54 aa5.43□□□□□ -1.54
SHKBP1-209ENST00000595803 KRTAP2-2Q9BYT5 123 aa5.41□□□□□ -1.54
SHKBP1-209ENST00000595803 KRTAP2-1Q9BYU5 128 aa5.41□□□□□ -1.54
SHKBP1-209ENST00000595803 GPR98Q8WXG9 6306 aa5.41□□□□□ -1.54
SHKBP1-209ENST00000595803 KRTAP10-5P60370 271 aa5.4□□□□□ -1.54
SHKBP1-209ENST00000595803 MT1XP80297 61 aa5.4□□□□□ -1.54
SHKBP1-209ENST00000595803 ROMO1P60602 79 aa5.38□□□□□ -1.55
SHKBP1-209ENST00000595803 C10orf95Q9H7T3 257 aa5.38□□□□□ -1.55
SHKBP1-209ENST00000595803 SPRR2EP22531 72 aa5.32□□□□□ -1.56
SHKBP1-209ENST00000595803 SPRR2BP35325 72 aa5.32□□□□□ -1.56
SHKBP1-209ENST00000595803 SPRR2AP35326 72 aa5.32□□□□□ -1.56
SHKBP1-209ENST00000595803 TNP1P09430 55 aa5.29□□□□□ -1.56
SHKBP1-209ENST00000595803 KRTAP25-1Q3LHN0 102 aa5.24□□□□□ -1.57
SHKBP1-209ENST00000595803 SPRR2FQ96RM1 72 aa5.23□□□□□ -1.57
SHKBP1-209ENST00000595803 KRTAP10-7P60409 375 aaPredicted RBP5.19□□□□□ -1.58
SHKBP1-209ENST00000595803 SVIPQ8NHG7 77 aa5.17□□□□□ -1.58
SHKBP1-209ENST00000595803 SPRR2DP22532 72 aa5.15□□□□□ -1.59
SHKBP1-209ENST00000595803 LCE1AQ5T7P2 110 aa5.15□□□□□ -1.59
SHKBP1-209ENST00000595803 KRTAP10-12P60413 245 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms