RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 PSPHP1O15172 72 aa6.24□□□□□ -1.41
NPC1-214ENST00000593280 PRR15LQ9BU68 103 aa6.21□□□□□ -1.41
NPC1-214ENST00000593280 LINC01558Q9Y6Z2 57 aa6.21□□□□□ -1.41
NPC1-214ENST00000593280 COX6B2Q6YFQ2 88 aa6.21□□□□□ -1.42
NPC1-214ENST00000593280 LCE2AQ5TA79 106 aaPredicted RBP6.2□□□□□ -1.42
NPC1-214ENST00000593280 KRTAP3-1Q9BYR8 98 aa6.2□□□□□ -1.42
NPC1-214ENST00000593280 LRP2P98164 4655 aa6.19□□□□□ -1.42
NPC1-214ENST00000593280 Q5VV11 94 aa6.16□□□□□ -1.42
NPC1-214ENST00000593280 SPTSSBQ8NFR3 76 aa6.14□□□□□ -1.43
NPC1-214ENST00000593280 SEC61BP60468 96 aaKnown RBP6.1□□□□□ -1.43
NPC1-214ENST00000593280 LCE3BQ5TA77 95 aa6.1□□□□□ -1.43
NPC1-214ENST00000593280 A0A1B0GU69 56 aa6.09□□□□□ -1.43
NPC1-214ENST00000593280 BRK1Q8WUW1 75 aa6.09□□□□□ -1.43
NPC1-214ENST00000593280 HMCN2Q8NDA2 5059 aa6.08□□□□□ -1.44
NPC1-214ENST00000593280 KRTAP4-8A0A0G2JLE6 195 aa6.07□□□□□ -1.44
NPC1-214ENST00000593280 A6NED7 52 aa6.05□□□□□ -1.44
NPC1-214ENST00000593280 RBM12B-AS1Q9P1G2 102 aa6.04□□□□□ -1.44
NPC1-214ENST00000593280 S4R3F8 94 aa6.03□□□□□ -1.44
NPC1-214ENST00000593280 SEC61GP60059 68 aa6.02□□□□□ -1.45
NPC1-214ENST00000593280 H1FX-AS1Q4G0G2 97 aa6.02□□□□□ -1.45
NPC1-214ENST00000593280 MUC17Q685J3 4493 aa6.02□□□□□ -1.45
NPC1-214ENST00000593280 PRO0628Q9UI54 55 aa6.01□□□□□ -1.45
NPC1-214ENST00000593280 UBR4Q5T4S7 5183 aa6.01□□□□□ -1.45
NPC1-214ENST00000593280 LCA10Q71F78 164 aa6□□□□□ -1.45
NPC1-214ENST00000593280 KRTAP9-9Q9BYP9 154 aa5.96□□□□□ -1.46
NPC1-214ENST00000593280 KRTAP9-4Q9BYQ2 154 aa5.96□□□□□ -1.46
NPC1-214ENST00000593280 CDC42SE1Q9NRR8 79 aa5.96□□□□□ -1.46
NPC1-214ENST00000593280 KRTAP4-1Q9BYQ7 146 aa5.94□□□□□ -1.46
NPC1-214ENST00000593280 A8MU10 97 aa5.92□□□□□ -1.46
NPC1-214ENST00000593280 UQCR11O14957 56 aa5.92□□□□□ -1.46
NPC1-214ENST00000593280 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
NPC1-214ENST00000593280 MIR22HGQ0VDD5 57 aa5.88□□□□□ -1.47
NPC1-214ENST00000593280 SPATA8Q6RVD6 105 aa5.86□□□□□ -1.47
NPC1-214ENST00000593280 MUC2Q02817 5179 aa5.86□□□□□ -1.47
NPC1-214ENST00000593280 A0A1B0GU33 70 aa5.85□□□□□ -1.47
NPC1-214ENST00000593280 CSAG1Q6PB30 78 aa5.85□□□□□ -1.47
NPC1-214ENST00000593280 SVIPQ8NHG7 77 aa5.82□□□□□ -1.48
NPC1-214ENST00000593280 RNF213Q63HN8 5207 aa5.8□□□□□ -1.48
NPC1-214ENST00000593280 KRTAP10-6P60371 365 aaPredicted RBP5.8□□□□□ -1.48
NPC1-214ENST00000593280 KRTAP4-12Q9BQ66 201 aa5.8□□□□□ -1.48
NPC1-214ENST00000593280 KRTAP19-2Q3LHN2 52 aa5.79□□□□□ -1.48
NPC1-214ENST00000593280 H0YAA0 97 aa5.78□□□□□ -1.48
NPC1-214ENST00000593280 ADM2Q7Z4H4 148 aa5.77□□□□□ -1.48
NPC1-214ENST00000593280 P0C880 135 aa5.75□□□□□ -1.49
NPC1-214ENST00000593280 PMAIP1Q13794 54 aa5.75□□□□□ -1.49
NPC1-214ENST00000593280 LORP23490 312 aaPredicted RBP5.7□□□□□ -1.5
NPC1-214ENST00000593280 A6NN06 94 aa5.69□□□□□ -1.5
NPC1-214ENST00000593280 LCE1DQ5T752 114 aa5.69□□□□□ -1.5
NPC1-214ENST00000593280 KRTAP13-4Q3LI77 160 aa5.67□□□□□ -1.5
NPC1-214ENST00000593280 FLGP20930 4061 aaPredicted RBP5.67□□□□□ -1.5
NPC1-214ENST00000593280 KRTAP5-3Q6L8H2 238 aa5.65□□□□□ -1.51
NPC1-214ENST00000593280 KRTAP4-2Q9BYR5 136 aa5.65□□□□□ -1.51
NPC1-214ENST00000593280 LCE2CQ5TA81 110 aa5.63□□□□□ -1.51
NPC1-214ENST00000593280 FAT4Q6V0I7 4981 aa5.62□□□□□ -1.51
NPC1-214ENST00000593280 KRTAP9-8Q9BYQ0 159 aa5.62□□□□□ -1.51
NPC1-214ENST00000593280 A0A0D9SG42 100 aa5.61□□□□□ -1.51
NPC1-214ENST00000593280 M0QZ58 72 aa5.61□□□□□ -1.51
NPC1-214ENST00000593280 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
NPC1-214ENST00000593280 K7ERS5 55 aa5.59□□□□□ -1.51
NPC1-214ENST00000593280 KTN1-AS1Q86SY8 53 aa5.56□□□□□ -1.52
NPC1-214ENST00000593280 R4GN34 69 aa5.56□□□□□ -1.52
NPC1-214ENST00000593280 MT1HP80294 61 aa5.5□□□□□ -1.53
NPC1-214ENST00000593280 M0R2T5 61 aa5.49□□□□□ -1.53
NPC1-214ENST00000593280 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
NPC1-214ENST00000593280 KRTAP12-2P59991 146 aa5.47□□□□□ -1.53
NPC1-214ENST00000593280 LINC01554Q52M75 96 aa5.47□□□□□ -1.53
NPC1-214ENST00000593280 SPINT4Q6UDR6 99 aa5.46□□□□□ -1.54
NPC1-214ENST00000593280 CRIPTQ9P021 101 aa5.44□□□□□ -1.54
NPC1-214ENST00000593280 KRTAP19-1Q8IUB9 90 aa5.42□□□□□ -1.54
NPC1-214ENST00000593280 PRAC1Q96KF2 57 aa5.38□□□□□ -1.55
NPC1-214ENST00000593280 ROMO1P60602 79 aa5.37□□□□□ -1.55
NPC1-214ENST00000593280 MT2AP02795 61 aa5.32□□□□□ -1.56
NPC1-214ENST00000593280 KRTAP10-10P60014 251 aa5.3□□□□□ -1.56
NPC1-214ENST00000593280 MT1FP04733 61 aa5.29□□□□□ -1.56
NPC1-214ENST00000593280 SPRR2GQ9BYE4 73 aa5.28□□□□□ -1.56
NPC1-214ENST00000593280 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
NPC1-214ENST00000593280 CRCT1Q9UGL9 99 aa5.26□□□□□ -1.57
NPC1-214ENST00000593280 CAMK2N1Q7Z7J9 78 aa5.23□□□□□ -1.57
NPC1-214ENST00000593280 KRTAP25-1Q3LHN0 102 aa5.22□□□□□ -1.57
NPC1-214ENST00000593280 PLAC4Q8WY50 150 aa5.16□□□□□ -1.58
NPC1-214ENST00000593280 C10orf95Q9H7T3 257 aa5.16□□□□□ -1.58
NPC1-214ENST00000593280 FSIP2Q5CZC0 6907 aa5.15□□□□□ -1.59
NPC1-214ENST00000593280 KRTAP19-8Q3LI54 63 aa5.12□□□□□ -1.59
NPC1-214ENST00000593280 KRTAP9-3Q9BYQ3 159 aa5.11□□□□□ -1.59
NPC1-214ENST00000593280 MT1BP07438 61 aa5.04□□□□□ -1.6
NPC1-214ENST00000593280 TNP1P09430 55 aa4.98□□□□□ -1.61
NPC1-214ENST00000593280 KRTAP9-7A8MTY7 169 aa4.92□□□□□ -1.62
NPC1-214ENST00000593280 PP632Q6XCG6 107 aa4.92□□□□□ -1.62
NPC1-214ENST00000593280 USH2AO75445 5202 aa4.92□□□□□ -1.62
NPC1-214ENST00000593280 MT1XP80297 61 aa4.91□□□□□ -1.62
NPC1-214ENST00000593280 KRTAP10-5P60370 271 aa4.9□□□□□ -1.62
NPC1-214ENST00000593280 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
NPC1-214ENST00000593280 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
NPC1-214ENST00000593280 SSPOA2VEC9 5147 aa4.77□□□□□ -1.65
NPC1-214ENST00000593280 LCE3AQ5TA76 89 aa4.75□□□□□ -1.65
NPC1-214ENST00000593280 KRTAP10-12P60413 245 aa4.73□□□□□ -1.65
NPC1-214ENST00000593280 KRTAP10-7P60409 375 aaPredicted RBP4.72□□□□□ -1.65
NPC1-214ENST00000593280 FCGBPQ9Y6R7 5405 aaPredicted RBP4.69□□□□□ -1.66
NPC1-214ENST00000593280 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
NPC1-214ENST00000593280 KRTAP8-1Q8IUC2 63 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 220.8 ms