RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 C4orf26Q17RF5 130 aa6.9□□□□□ -1.3
VMP1-217ENST00000593168 COX6B2Q6YFQ2 88 aa6.88□□□□□ -1.31
VMP1-217ENST00000593168 DMAC1Q96GE9 116 aa6.87□□□□□ -1.31
VMP1-217ENST00000593168 A8MUN3 132 aa6.86□□□□□ -1.31
VMP1-217ENST00000593168 MPLKIPQ8TAP9 179 aa6.86□□□□□ -1.31
VMP1-217ENST00000593168 ACYP2P14621 99 aa6.83□□□□□ -1.32
VMP1-217ENST00000593168 KRTAP3-1Q9BYR8 98 aa6.83□□□□□ -1.32
VMP1-217ENST00000593168 KRTAP19-2Q3LHN2 52 aa6.82□□□□□ -1.32
VMP1-217ENST00000593168 RBM12B-AS1Q9P1G2 102 aa6.82□□□□□ -1.32
VMP1-217ENST00000593168 MT1HP80294 61 aa6.8□□□□□ -1.32
VMP1-217ENST00000593168 SERP1Q9Y6X1 66 aa6.78□□□□□ -1.32
VMP1-217ENST00000593168 RPS28P62857 69 aaKnown RBP6.76□□□□□ -1.33
VMP1-217ENST00000593168 COA5Q86WW8 74 aa6.75□□□□□ -1.33
VMP1-217ENST00000593168 H1FX-AS1Q4G0G2 97 aa6.73□□□□□ -1.33
VMP1-217ENST00000593168 KRTAP10-6P60371 365 aaPredicted RBP6.72□□□□□ -1.33
VMP1-217ENST00000593168 CHKB-CPT1BH3BT56 60 aa6.69□□□□□ -1.34
VMP1-217ENST00000593168 FLGP20930 4061 aaPredicted RBP6.67□□□□□ -1.34
VMP1-217ENST00000593168 S4R3F8 94 aa6.64□□□□□ -1.35
VMP1-217ENST00000593168 KRTAP9-7A8MTY7 169 aa6.62□□□□□ -1.35
VMP1-217ENST00000593168 SMIM26A0A096LP01 95 aa6.61□□□□□ -1.35
VMP1-217ENST00000593168 M0R2T5 61 aa6.61□□□□□ -1.35
VMP1-217ENST00000593168 LCA10Q71F78 164 aa6.61□□□□□ -1.35
VMP1-217ENST00000593168 SPTSSBQ8NFR3 76 aa6.61□□□□□ -1.35
VMP1-217ENST00000593168 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.6□□□□□ -1.35
VMP1-217ENST00000593168 SSPOA2VEC9 5147 aa6.58□□□□□ -1.36
VMP1-217ENST00000593168 USH2AO75445 5202 aa6.55□□□□□ -1.36
VMP1-217ENST00000593168 CSAG1Q6PB30 78 aa6.53□□□□□ -1.36
VMP1-217ENST00000593168 Q1T7F1 81 aa6.5□□□□□ -1.37
VMP1-217ENST00000593168 V9GYY9 64 aa6.5□□□□□ -1.37
VMP1-217ENST00000593168 LINC01558Q9Y6Z2 57 aa6.49□□□□□ -1.37
VMP1-217ENST00000593168 KRTAP4-8Q9BYQ9 185 aa6.48□□□□□ -1.37
VMP1-217ENST00000593168 FCGBPQ9Y6R7 5405 aaPredicted RBP6.43□□□□□ -1.38
VMP1-217ENST00000593168 A0A1B0GU69 56 aa6.4□□□□□ -1.38
VMP1-217ENST00000593168 SEC61GP60059 68 aa6.4□□□□□ -1.38
VMP1-217ENST00000593168 H0YAA0 97 aa6.39□□□□□ -1.39
VMP1-217ENST00000593168 PRR15LQ9BU68 103 aa6.39□□□□□ -1.39
VMP1-217ENST00000593168 KRTAP9-8Q9BYQ0 159 aa6.38□□□□□ -1.39
VMP1-217ENST00000593168 PSPHP1O15172 72 aa6.33□□□□□ -1.4
VMP1-217ENST00000593168 ADM2Q7Z4H4 148 aa6.33□□□□□ -1.4
VMP1-217ENST00000593168 Q5VV11 94 aa6.3□□□□□ -1.4
VMP1-217ENST00000593168 KRTAP19-1Q8IUB9 90 aa6.3□□□□□ -1.4
VMP1-217ENST00000593168 KRTAP4-12Q9BQ66 201 aa6.28□□□□□ -1.4
VMP1-217ENST00000593168 P0C880 135 aa6.27□□□□□ -1.41
VMP1-217ENST00000593168 H3BS24 57 aa6.25□□□□□ -1.41
VMP1-217ENST00000593168 MT2AP02795 61 aa6.25□□□□□ -1.41
VMP1-217ENST00000593168 A0A1B0GU33 70 aa6.24□□□□□ -1.41
VMP1-217ENST00000593168 MACF1Q9UPN3 7388 aaKnown RBP6.22□□□□□ -1.41
VMP1-217ENST00000593168 LCE3BQ5TA77 95 aa6.21□□□□□ -1.42
VMP1-217ENST00000593168 UQCR11O14957 56 aa6.2□□□□□ -1.42
VMP1-217ENST00000593168 MT1FP04733 61 aa6.2□□□□□ -1.42
VMP1-217ENST00000593168 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
VMP1-217ENST00000593168 KRTAP9-3Q9BYQ3 159 aa6.19□□□□□ -1.42
VMP1-217ENST00000593168 A6NED7 52 aa6.16□□□□□ -1.42
VMP1-217ENST00000593168 M0QZ58 72 aa6.16□□□□□ -1.42
VMP1-217ENST00000593168 CRIPTQ9P021 101 aa6.16□□□□□ -1.42
VMP1-217ENST00000593168 KRTAP10-10P60014 251 aa6.13□□□□□ -1.43
VMP1-217ENST00000593168 MIR22HGQ0VDD5 57 aa6.11□□□□□ -1.43
VMP1-217ENST00000593168 SPATA8Q6RVD6 105 aa6.11□□□□□ -1.43
VMP1-217ENST00000593168 R4GN34 69 aa6.11□□□□□ -1.43
VMP1-217ENST00000593168 KRTAP13-4Q3LI77 160 aa6.1□□□□□ -1.43
VMP1-217ENST00000593168 KRTAP19-6Q3LI70 58 aa6.08□□□□□ -1.44
VMP1-217ENST00000593168 CDC42SE1Q9NRR8 79 aa6.06□□□□□ -1.44
VMP1-217ENST00000593168 KRTAP9-9Q9BYP9 154 aa6.05□□□□□ -1.44
VMP1-217ENST00000593168 KRTAP9-4Q9BYQ2 154 aa6.05□□□□□ -1.44
VMP1-217ENST00000593168 KRTAP6-3Q3LI67 103 aa6.03□□□□□ -1.44
VMP1-217ENST00000593168 SPRR2GQ9BYE4 73 aa6.03□□□□□ -1.44
VMP1-217ENST00000593168 BRK1Q8WUW1 75 aa6.01□□□□□ -1.45
VMP1-217ENST00000593168 A8MU10 97 aa6□□□□□ -1.45
VMP1-217ENST00000593168 A0A0D9SG42 100 aa5.97□□□□□ -1.45
VMP1-217ENST00000593168 LINC01554Q52M75 96 aa5.96□□□□□ -1.46
VMP1-217ENST00000593168 A6NN06 94 aa5.93□□□□□ -1.46
VMP1-217ENST00000593168 KRTAP4-8A0A0G2JLE6 195 aa5.92□□□□□ -1.46
VMP1-217ENST00000593168 KRTAP12-1P59990 96 aa5.89□□□□□ -1.47
VMP1-217ENST00000593168 KRTAP19-8Q3LI54 63 aa5.89□□□□□ -1.47
VMP1-217ENST00000593168 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
VMP1-217ENST00000593168 MUC12Q9UKN1 5478 aa5.88□□□□□ -1.47
VMP1-217ENST00000593168 K7ERS5 55 aa5.87□□□□□ -1.47
VMP1-217ENST00000593168 SPINT4Q6UDR6 99 aa5.86□□□□□ -1.47
VMP1-217ENST00000593168 NEBP20929 6669 aa5.86□□□□□ -1.47
VMP1-217ENST00000593168 KRTAP12-2P59991 146 aa5.85□□□□□ -1.47
VMP1-217ENST00000593168 PRO0628Q9UI54 55 aa5.85□□□□□ -1.47
VMP1-217ENST00000593168 LCE1DQ5T752 114 aa5.81□□□□□ -1.48
VMP1-217ENST00000593168 PLAC4Q8WY50 150 aa5.81□□□□□ -1.48
VMP1-217ENST00000593168 MT1BP07438 61 aa5.79□□□□□ -1.48
VMP1-217ENST00000593168 LCE4AQ5TA78 99 aa5.79□□□□□ -1.48
VMP1-217ENST00000593168 KRTAP20-1Q3LI63 56 aa5.76□□□□□ -1.49
VMP1-217ENST00000593168 CAMK2N1Q7Z7J9 78 aa5.71□□□□□ -1.5
VMP1-217ENST00000593168 PMAIP1Q13794 54 aa5.7□□□□□ -1.5
VMP1-217ENST00000593168 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
VMP1-217ENST00000593168 MDN1Q9NU22 5596 aa5.65□□□□□ -1.5
VMP1-217ENST00000593168 KMT2DO14686 5537 aa5.61□□□□□ -1.51
VMP1-217ENST00000593168 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
VMP1-217ENST00000593168 KRTAP5-9P26371 169 aa5.6□□□□□ -1.51
VMP1-217ENST00000593168 ROMO1P60602 79 aa5.6□□□□□ -1.51
VMP1-217ENST00000593168 C10orf95Q9H7T3 257 aa5.59□□□□□ -1.51
VMP1-217ENST00000593168 MT1XP80297 61 aa5.58□□□□□ -1.52
VMP1-217ENST00000593168 KRTAP10-5P60370 271 aa5.56□□□□□ -1.52
VMP1-217ENST00000593168 PRO2289Q9P1D8 64 aa5.55□□□□□ -1.52
VMP1-217ENST00000593168 KRTAP2-3P0C7H8 128 aa5.51□□□□□ -1.53
VMP1-217ENST00000593168 KRTAP2-4Q9BYR9 128 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms