RNA–Protein interactions for RNA: ENST00000591028.1

NFIX-213, Transcript of nuclear factor I X, humanhuman

TSL 3

Gene NFIX, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-213ENST00000591028 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.81□□□□□ -1.16
NFIX-213ENST00000591028 SNURFQ9Y675 71 aa7.81□□□□□ -1.16
NFIX-213ENST00000591028 KRTAP3-1Q9BYR8 98 aa7.79□□□□□ -1.16
NFIX-213ENST00000591028 KRTAP9-7A8MTY7 169 aa7.78□□□□□ -1.16
NFIX-213ENST00000591028 NDUFC1O43677 76 aa7.78□□□□□ -1.16
NFIX-213ENST00000591028 SPANXA2-OT1Q8N9U9 137 aa7.76□□□□□ -1.17
NFIX-213ENST00000591028 S4R3F8 94 aa7.76□□□□□ -1.17
NFIX-213ENST00000591028 FCGBPQ9Y6R7 5405 aaPredicted RBP7.75□□□□□ -1.17
NFIX-213ENST00000591028 DMAC1Q96GE9 116 aa7.73□□□□□ -1.17
NFIX-213ENST00000591028 MT2AP02795 61 aa7.71□□□□□ -1.18
NFIX-213ENST00000591028 H7BZZ5 65 aa7.7□□□□□ -1.18
NFIX-213ENST00000591028 CCDC179H3BU77 68 aa7.69□□□□□ -1.18
NFIX-213ENST00000591028 CSAG1Q6PB30 78 aa7.68□□□□□ -1.18
NFIX-213ENST00000591028 CYSTM1Q9H1C7 97 aa7.67□□□□□ -1.18
NFIX-213ENST00000591028 MT1FP04733 61 aa7.66□□□□□ -1.18
NFIX-213ENST00000591028 LCE2BO14633 110 aa7.63□□□□□ -1.19
NFIX-213ENST00000591028 LCA10Q71F78 164 aa7.63□□□□□ -1.19
NFIX-213ENST00000591028 ACYP2P14621 99 aa7.61□□□□□ -1.19
NFIX-213ENST00000591028 KRTAP19-1Q8IUB9 90 aa7.61□□□□□ -1.19
NFIX-213ENST00000591028 KRTAP10-10P60014 251 aa7.58□□□□□ -1.2
NFIX-213ENST00000591028 KRTAP9-3Q9BYQ3 159 aa7.58□□□□□ -1.2
NFIX-213ENST00000591028 ATP5EP56381 51 aaPredicted RBP7.55□□□□□ -1.2
NFIX-213ENST00000591028 KRTAP3-3Q9BYR6 98 aa7.55□□□□□ -1.2
NFIX-213ENST00000591028 PCP4P48539 62 aa7.52□□□□□ -1.21
NFIX-213ENST00000591028 TMEM258P61165 79 aa7.52□□□□□ -1.21
NFIX-213ENST00000591028 SPTSSBQ8NFR3 76 aa7.52□□□□□ -1.21
NFIX-213ENST00000591028 MACF1Q9UPN3 7388 aaKnown RBP7.48□□□□□ -1.21
NFIX-213ENST00000591028 H0YAA0 97 aa7.47□□□□□ -1.21
NFIX-213ENST00000591028 CHKB-CPT1BH3BT56 60 aa7.46□□□□□ -1.22
NFIX-213ENST00000591028 SYNE2Q8WXH0 6885 aaKnown RBP7.45□□□□□ -1.22
NFIX-213ENST00000591028 COA5Q86WW8 74 aa7.43□□□□□ -1.22
NFIX-213ENST00000591028 CRIPTQ9P021 101 aa7.38□□□□□ -1.23
NFIX-213ENST00000591028 KRTAP19-6Q3LI70 58 aa7.37□□□□□ -1.23
NFIX-213ENST00000591028 ADM2Q7Z4H4 148 aa7.3□□□□□ -1.24
NFIX-213ENST00000591028 SERP1Q9Y6X1 66 aa7.27□□□□□ -1.25
NFIX-213ENST00000591028 SPRR2GQ9BYE4 73 aa7.22□□□□□ -1.25
NFIX-213ENST00000591028 KRTAP3-2Q9BYR7 98 aa7.19□□□□□ -1.26
NFIX-213ENST00000591028 SEC61GP60059 68 aa7.17□□□□□ -1.26
NFIX-213ENST00000591028 R4GN34 69 aa7.17□□□□□ -1.26
NFIX-213ENST00000591028 KRTAP6-3Q3LI67 103 aa7.16□□□□□ -1.26
NFIX-213ENST00000591028 RPS28P62857 69 aaKnown RBP7.14□□□□□ -1.27
NFIX-213ENST00000591028 P0C880 135 aa7.13□□□□□ -1.27
NFIX-213ENST00000591028 Q5VV11 94 aa7.12□□□□□ -1.27
NFIX-213ENST00000591028 KRTAP19-8Q3LI54 63 aa7.08□□□□□ -1.28
NFIX-213ENST00000591028 LINC01558Q9Y6Z2 57 aa7.08□□□□□ -1.28
NFIX-213ENST00000591028 M0QZ58 72 aa7.07□□□□□ -1.28
NFIX-213ENST00000591028 A0A1B0GU69 56 aa7.04□□□□□ -1.28
NFIX-213ENST00000591028 MUC12Q9UKN1 5478 aa7.04□□□□□ -1.28
NFIX-213ENST00000591028 NEBP20929 6669 aa7.03□□□□□ -1.28
NFIX-213ENST00000591028 SMIM26A0A096LP01 95 aa7.02□□□□□ -1.29
NFIX-213ENST00000591028 V9GYY9 64 aa7.02□□□□□ -1.29
NFIX-213ENST00000591028 PRR15LQ9BU68 103 aa7□□□□□ -1.29
NFIX-213ENST00000591028 Q1T7F1 81 aa6.99□□□□□ -1.29
NFIX-213ENST00000591028 MT1BP07438 61 aa6.96□□□□□ -1.3
NFIX-213ENST00000591028 A6NN06 94 aa6.95□□□□□ -1.3
NFIX-213ENST00000591028 PLAC4Q8WY50 150 aa6.95□□□□□ -1.3
NFIX-213ENST00000591028 A0A1B0GU33 70 aa6.93□□□□□ -1.3
NFIX-213ENST00000591028 LINC01554Q52M75 96 aa6.92□□□□□ -1.3
NFIX-213ENST00000591028 KRTAP13-4Q3LI77 160 aa6.88□□□□□ -1.31
NFIX-213ENST00000591028 PRO2289Q9P1D8 64 aa6.85□□□□□ -1.31
NFIX-213ENST00000591028 MDN1Q9NU22 5596 aa6.85□□□□□ -1.31
NFIX-213ENST00000591028 KRTAP10-5P60370 271 aa6.82□□□□□ -1.32
NFIX-213ENST00000591028 KMT2DO14686 5537 aa6.82□□□□□ -1.32
NFIX-213ENST00000591028 UQCR11O14957 56 aa6.8□□□□□ -1.32
NFIX-213ENST00000591028 KRTAP20-1Q3LI63 56 aa6.79□□□□□ -1.32
NFIX-213ENST00000591028 PSPHP1O15172 72 aa6.78□□□□□ -1.32
NFIX-213ENST00000591028 SPATA8Q6RVD6 105 aa6.77□□□□□ -1.33
NFIX-213ENST00000591028 KRTAP5-9P26371 169 aa6.74□□□□□ -1.33
NFIX-213ENST00000591028 A0A0D9SG42 100 aa6.68□□□□□ -1.34
NFIX-213ENST00000591028 CAMK2N1Q7Z7J9 78 aa6.66□□□□□ -1.34
NFIX-213ENST00000591028 MIR22HGQ0VDD5 57 aa6.65□□□□□ -1.34
NFIX-213ENST00000591028 MT1XP80297 61 aa6.63□□□□□ -1.35
NFIX-213ENST00000591028 A8MU10 97 aa6.62□□□□□ -1.35
NFIX-213ENST00000591028 KRTAP12-1P59990 96 aa6.62□□□□□ -1.35
NFIX-213ENST00000591028 A6NED7 52 aa6.61□□□□□ -1.35
NFIX-213ENST00000591028 SPINT4Q6UDR6 99 aa6.6□□□□□ -1.35
NFIX-213ENST00000591028 KRTAP12-2P59991 146 aa6.56□□□□□ -1.36
NFIX-213ENST00000591028 SPRR2FQ96RM1 72 aa6.52□□□□□ -1.37
NFIX-213ENST00000591028 KRTAP2-3P0C7H8 128 aa6.51□□□□□ -1.37
NFIX-213ENST00000591028 KRTAP2-4Q9BYR9 128 aa6.51□□□□□ -1.37
NFIX-213ENST00000591028 CDC42SE1Q9NRR8 79 aa6.51□□□□□ -1.37
NFIX-213ENST00000591028 K7ERS5 55 aa6.49□□□□□ -1.37
NFIX-213ENST00000591028 SPRR2EP22531 72 aa6.49□□□□□ -1.37
NFIX-213ENST00000591028 SPRR2BP35325 72 aa6.49□□□□□ -1.37
NFIX-213ENST00000591028 SPRR2AP35326 72 aa6.49□□□□□ -1.37
NFIX-213ENST00000591028 KRTAP8-1Q8IUC2 63 aa6.39□□□□□ -1.39
NFIX-213ENST00000591028 LCE1AQ5T7P2 110 aa6.35□□□□□ -1.39
NFIX-213ENST00000591028 KRTAP10-12P60413 245 aa6.34□□□□□ -1.39
NFIX-213ENST00000591028 KRTAP10-7P60409 375 aaPredicted RBP6.3□□□□□ -1.4
NFIX-213ENST00000591028 KRTAP2-2Q9BYT5 123 aa6.28□□□□□ -1.4
NFIX-213ENST00000591028 KRTAP2-1Q9BYU5 128 aa6.28□□□□□ -1.4
NFIX-213ENST00000591028 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
NFIX-213ENST00000591028 KRTAP4-8Q9BYQ9 185 aa6.27□□□□□ -1.41
NFIX-213ENST00000591028 C10orf95Q9H7T3 257 aa6.27□□□□□ -1.41
NFIX-213ENST00000591028 SPRR2DP22532 72 aa6.26□□□□□ -1.41
NFIX-213ENST00000591028 BRK1Q8WUW1 75 aa6.26□□□□□ -1.41
NFIX-213ENST00000591028 TNP1P09430 55 aa6.25□□□□□ -1.41
NFIX-213ENST00000591028 KRTAP25-1Q3LHN0 102 aa6.12□□□□□ -1.43
NFIX-213ENST00000591028 LCE3BQ5TA77 95 aa6.11□□□□□ -1.43
NFIX-213ENST00000591028 ROMO1P60602 79 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms