RNA–Protein interactions for RNA: ENST00000590436.5

TCF3-213, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-213ENST00000590436 CCDC179H3BU77 68 aa9.64□□□□□ -0.87
TCF3-213ENST00000590436 KRTAP10-6P60371 365 aaPredicted RBP9.64□□□□□ -0.87
TCF3-213ENST00000590436 LCA10Q71F78 164 aa9.63□□□□□ -0.87
TCF3-213ENST00000590436 CYSTM1Q9H1C7 97 aa9.61□□□□□ -0.87
TCF3-213ENST00000590436 H7BZZ5 65 aa9.6□□□□□ -0.87
TCF3-213ENST00000590436 ACYP2P14621 99 aa9.59□□□□□ -0.87
TCF3-213ENST00000590436 LORP23490 312 aaPredicted RBP9.59□□□□□ -0.87
TCF3-213ENST00000590436 CSAG1Q6PB30 78 aa9.57□□□□□ -0.88
TCF3-213ENST00000590436 KRTAP9-8Q9BYQ0 159 aa9.46□□□□□ -0.9
TCF3-213ENST00000590436 CHKB-CPT1BH3BT56 60 aa9.44□□□□□ -0.9
TCF3-213ENST00000590436 MT2AP02795 61 aa9.41□□□□□ -0.9
TCF3-213ENST00000590436 ATP5EP56381 51 aaPredicted RBP9.39□□□□□ -0.91
TCF3-213ENST00000590436 SPTSSBQ8NFR3 76 aa9.39□□□□□ -0.91
TCF3-213ENST00000590436 COA5Q86WW8 74 aa9.36□□□□□ -0.91
TCF3-213ENST00000590436 TMEM258P61165 79 aa9.35□□□□□ -0.91
TCF3-213ENST00000590436 KRTAP10-10P60014 251 aa9.34□□□□□ -0.91
TCF3-213ENST00000590436 MT1FP04733 61 aa9.33□□□□□ -0.92
TCF3-213ENST00000590436 PCP4P48539 62 aa9.32□□□□□ -0.92
TCF3-213ENST00000590436 H0YAA0 97 aa9.29□□□□□ -0.92
TCF3-213ENST00000590436 ADM2Q7Z4H4 148 aa9.2□□□□□ -0.94
TCF3-213ENST00000590436 KRTAP9-3Q9BYQ3 159 aa9.15□□□□□ -0.94
TCF3-213ENST00000590436 KRTAP9-2Q9BYQ4 174 aa9.09□□□□□ -0.95
TCF3-213ENST00000590436 CRIPTQ9P021 101 aa9.09□□□□□ -0.95
TCF3-213ENST00000590436 P0C880 135 aa9.06□□□□□ -0.96
TCF3-213ENST00000590436 SERP1Q9Y6X1 66 aa9.06□□□□□ -0.96
TCF3-213ENST00000590436 LOC100996750A0A140TA64 210 aa9.03□□□□□ -0.96
TCF3-213ENST00000590436 KRTAP4-6Q9BYQ5 205 aa9.03□□□□□ -0.96
TCF3-213ENST00000590436 SEC61GP60059 68 aa9□□□□□ -0.97
TCF3-213ENST00000590436 KRTAP19-1Q8IUB9 90 aa8.98□□□□□ -0.97
TCF3-213ENST00000590436 SPRR2GQ9BYE4 73 aa8.98□□□□□ -0.97
TCF3-213ENST00000590436 R4GN34 69 aa8.94□□□□□ -0.98
TCF3-213ENST00000590436 M0QZ58 72 aa8.89□□□□□ -0.99
TCF3-213ENST00000590436 A0A1B0GU69 56 aa8.88□□□□□ -0.99
TCF3-213ENST00000590436 LINC01558Q9Y6Z2 57 aa8.84□□□□□ -0.99
TCF3-213ENST00000590436 KRTAP19-8Q3LI54 63 aa8.82□□□□□ -1
TCF3-213ENST00000590436 PRR15LQ9BU68 103 aa8.82□□□□□ -1
TCF3-213ENST00000590436 Q5VV11 94 aa8.8□□□□□ -1
TCF3-213ENST00000590436 RPS28P62857 69 aaKnown RBP8.79□□□□□ -1
TCF3-213ENST00000590436 A0A1B0GU33 70 aa8.76□□□□□ -1.01
TCF3-213ENST00000590436 USH2AO75445 5202 aa8.76□□□□□ -1.01
TCF3-213ENST00000590436 SMIM26A0A096LP01 95 aa8.75□□□□□ -1.01
TCF3-213ENST00000590436 V9GYY9 64 aa8.74□□□□□ -1.01
TCF3-213ENST00000590436 LINC01554Q52M75 96 aa8.73□□□□□ -1.01
TCF3-213ENST00000590436 MT1BP07438 61 aa8.72□□□□□ -1.01
TCF3-213ENST00000590436 CRCT1Q9UGL9 99 aa8.7□□□□□ -1.02
TCF3-213ENST00000590436 KRTAP13-4Q3LI77 160 aa8.69□□□□□ -1.02
TCF3-213ENST00000590436 Q1T7F1 81 aa8.68□□□□□ -1.02
TCF3-213ENST00000590436 FSIP2Q5CZC0 6907 aa8.66□□□□□ -1.02
TCF3-213ENST00000590436 SPATA8Q6RVD6 105 aa8.61□□□□□ -1.03
TCF3-213ENST00000590436 PLAC4Q8WY50 150 aa8.61□□□□□ -1.03
TCF3-213ENST00000590436 KRTAP9-6A0A140TA67 174 aa8.59□□□□□ -1.03
TCF3-213ENST00000590436 A6NN06 94 aa8.58□□□□□ -1.04
TCF3-213ENST00000590436 KRTAP19-6Q3LI70 58 aa8.57□□□□□ -1.04
TCF3-213ENST00000590436 PSPHP1O15172 72 aa8.56□□□□□ -1.04
TCF3-213ENST00000590436 SSPOA2VEC9 5147 aa8.55□□□□□ -1.04
TCF3-213ENST00000590436 A0A0D9SG42 100 aa8.53□□□□□ -1.04
TCF3-213ENST00000590436 UQCR11O14957 56 aa8.52□□□□□ -1.05
TCF3-213ENST00000590436 A8MU10 97 aa8.41□□□□□ -1.06
TCF3-213ENST00000590436 KRTAP10-5P60370 271 aa8.41□□□□□ -1.06
TCF3-213ENST00000590436 MIR22HGQ0VDD5 57 aa8.38□□□□□ -1.07
TCF3-213ENST00000590436 PRO2289Q9P1D8 64 aa8.38□□□□□ -1.07
TCF3-213ENST00000590436 SPINT4Q6UDR6 99 aa8.37□□□□□ -1.07
TCF3-213ENST00000590436 KRTAP12-1P59990 96 aa8.36□□□□□ -1.07
TCF3-213ENST00000590436 A6NED7 52 aa8.33□□□□□ -1.08
TCF3-213ENST00000590436 MT1XP80297 61 aa8.33□□□□□ -1.08
TCF3-213ENST00000590436 CAMK2N1Q7Z7J9 78 aa8.32□□□□□ -1.08
TCF3-213ENST00000590436 KRTAP4-8Q9BYQ9 185 aa8.31□□□□□ -1.08
TCF3-213ENST00000590436 FCGBPQ9Y6R7 5405 aaPredicted RBP8.31□□□□□ -1.08
TCF3-213ENST00000590436 KRTAP12-2P59991 146 aa8.3□□□□□ -1.08
TCF3-213ENST00000590436 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.17□□□□□ -1.1
TCF3-213ENST00000590436 K7ERS5 55 aa8.15□□□□□ -1.1
TCF3-213ENST00000590436 CDC42SE1Q9NRR8 79 aa8.08□□□□□ -1.12
TCF3-213ENST00000590436 MACF1Q9UPN3 7388 aaKnown RBP7.98□□□□□ -1.13
TCF3-213ENST00000590436 KRTAP4-12Q9BQ66 201 aa7.97□□□□□ -1.13
TCF3-213ENST00000590436 KRTAP10-7P60409 375 aaPredicted RBP7.95□□□□□ -1.14
TCF3-213ENST00000590436 C10orf95Q9H7T3 257 aa7.93□□□□□ -1.14
TCF3-213ENST00000590436 KRTAP10-12P60413 245 aa7.91□□□□□ -1.14
TCF3-213ENST00000590436 LCE3BQ5TA77 95 aa7.91□□□□□ -1.14
TCF3-213ENST00000590436 BRK1Q8WUW1 75 aa7.84□□□□□ -1.15
TCF3-213ENST00000590436 TNP1P09430 55 aa7.83□□□□□ -1.16
TCF3-213ENST00000590436 KRTAP9-7A8MTY7 169 aa7.8□□□□□ -1.16
TCF3-213ENST00000590436 KRTAP9-9Q9BYP9 154 aa7.77□□□□□ -1.17
TCF3-213ENST00000590436 KRTAP9-4Q9BYQ2 154 aa7.77□□□□□ -1.17
TCF3-213ENST00000590436 KRTAP4-8A0A0G2JLE6 195 aa7.75□□□□□ -1.17
TCF3-213ENST00000590436 KRTAP6-3Q3LI67 103 aa7.75□□□□□ -1.17
TCF3-213ENST00000590436 KRTAP8-1Q8IUC2 63 aa7.75□□□□□ -1.17
TCF3-213ENST00000590436 SYNE2Q8WXH0 6885 aaKnown RBP7.73□□□□□ -1.17
TCF3-213ENST00000590436 KRTAP25-1Q3LHN0 102 aa7.7□□□□□ -1.18
TCF3-213ENST00000590436 KMT2DO14686 5537 aa7.68□□□□□ -1.18
TCF3-213ENST00000590436 ROMO1P60602 79 aa7.68□□□□□ -1.18
TCF3-213ENST00000590436 H3BS24 57 aa7.66□□□□□ -1.18
TCF3-213ENST00000590436 KRTAP5-9P26371 169 aa7.64□□□□□ -1.19
TCF3-213ENST00000590436 SPRR2FQ96RM1 72 aa7.57□□□□□ -1.2
TCF3-213ENST00000590436 LCE3AQ5TA76 89 aa7.55□□□□□ -1.2
TCF3-213ENST00000590436 KRTAP19-7Q3SYF9 63 aa7.43□□□□□ -1.22
TCF3-213ENST00000590436 KRTAP23-1A1A580 65 aa7.42□□□□□ -1.22
TCF3-213ENST00000590436 KRTAP19-5Q3LI72 72 aa7.42□□□□□ -1.22
TCF3-213ENST00000590436 PMAIP1Q13794 54 aa7.41□□□□□ -1.22
TCF3-213ENST00000590436 PRO0628Q9UI54 55 aa7.41□□□□□ -1.22
TCF3-213ENST00000590436 LCE1DQ5T752 114 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms