RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 TNXBP22105 4242 aa5.48□□□□□ -1.53
VPS25-202ENST00000589219 C7orf65Q6ZTY9 151 aa5.48□□□□□ -1.53
VPS25-202ENST00000589219 C20orf166-AS1Q96NR2 134 aa5.48□□□□□ -1.53
VPS25-202ENST00000589219 PRO0628Q9UI54 55 aa5.48□□□□□ -1.53
VPS25-202ENST00000589219 LRP2P98164 4655 aa5.47□□□□□ -1.53
VPS25-202ENST00000589219 IGKV2D-30A0A075B6S6 120 aa5.47□□□□□ -1.53
VPS25-202ENST00000589219 A8MUU9 505 aa5.47□□□□□ -1.53
VPS25-202ENST00000589219 A8MUN3 132 aa5.45□□□□□ -1.54
VPS25-202ENST00000589219 PSPHP1O15172 72 aa5.45□□□□□ -1.54
VPS25-202ENST00000589219 LINC01558Q9Y6Z2 57 aa5.45□□□□□ -1.54
VPS25-202ENST00000589219 CHKB-CPT1BH3BT56 60 aa5.44□□□□□ -1.54
VPS25-202ENST00000589219 Q5VV11 94 aa5.44□□□□□ -1.54
VPS25-202ENST00000589219 BRK1Q8WUW1 75 aa5.44□□□□□ -1.54
VPS25-202ENST00000589219 PRR15LQ9BU68 103 aa5.44□□□□□ -1.54
VPS25-202ENST00000589219 Q75L30 129 aa5.43□□□□□ -1.54
VPS25-202ENST00000589219 RNF213Q63HN8 5207 aa5.43□□□□□ -1.54
VPS25-202ENST00000589219 C9orf92A6NGG3 77 aa5.42□□□□□ -1.54
VPS25-202ENST00000589219 KRTAP4-9Q9BYQ8 210 aa5.37□□□□□ -1.55
VPS25-202ENST00000589219 LCE4AQ5TA78 99 aa5.35□□□□□ -1.55
VPS25-202ENST00000589219 A6NED7 52 aa5.32□□□□□ -1.56
VPS25-202ENST00000589219 SPTSSBQ8NFR3 76 aa5.31□□□□□ -1.56
VPS25-202ENST00000589219 LPAP08519 4548 aa5.31□□□□□ -1.56
VPS25-202ENST00000589219 SPINK7P58062 85 aa5.3□□□□□ -1.56
VPS25-202ENST00000589219 RPL37P61927 97 aaKnown RBP5.29□□□□□ -1.56
VPS25-202ENST00000589219 CDC42SE1Q9NRR8 79 aa5.29□□□□□ -1.56
VPS25-202ENST00000589219 A0A1B0GU69 56 aa5.28□□□□□ -1.56
VPS25-202ENST00000589219 ATP11AUNQ6ZP68 121 aa5.28□□□□□ -1.56
VPS25-202ENST00000589219 KRTAP4-2Q9BYR5 136 aa5.26□□□□□ -1.57
VPS25-202ENST00000589219 KRTAP9-7A8MTY7 169 aa5.25□□□□□ -1.57
VPS25-202ENST00000589219 KRTAP19-4Q3LI73 84 aa5.25□□□□□ -1.57
VPS25-202ENST00000589219 COX6B2Q6YFQ2 88 aa5.24□□□□□ -1.57
VPS25-202ENST00000589219 LCA10Q71F78 164 aa5.23□□□□□ -1.57
VPS25-202ENST00000589219 SEC61GP60059 68 aa5.2□□□□□ -1.58
VPS25-202ENST00000589219 KRTAP3-1Q9BYR8 98 aa5.2□□□□□ -1.58
VPS25-202ENST00000589219 MUC2Q02817 5179 aa5.2□□□□□ -1.58
VPS25-202ENST00000589219 TPRXLQ17RH7 258 aa5.19□□□□□ -1.58
VPS25-202ENST00000589219 A8MU10 97 aa5.18□□□□□ -1.58
VPS25-202ENST00000589219 KRTAP4-11Q9BYQ6 195 aa5.18□□□□□ -1.58
VPS25-202ENST00000589219 UQCR11O14957 56 aa5.17□□□□□ -1.58
VPS25-202ENST00000589219 SPATA8Q6RVD6 105 aa5.15□□□□□ -1.59
VPS25-202ENST00000589219 MIR22HGQ0VDD5 57 aa5.13□□□□□ -1.59
VPS25-202ENST00000589219 PMAIP1Q13794 54 aa5.13□□□□□ -1.59
VPS25-202ENST00000589219 H3BS24 57 aa5.11□□□□□ -1.59
VPS25-202ENST00000589219 A6NN06 94 aa5.1□□□□□ -1.59
VPS25-202ENST00000589219 LCE5AQ5TCM9 118 aa5.1□□□□□ -1.59
VPS25-202ENST00000589219 KRTAP9-3Q9BYQ3 159 aa5.08□□□□□ -1.6
VPS25-202ENST00000589219 S4R3F8 94 aa5.07□□□□□ -1.6
VPS25-202ENST00000589219 KTN1-AS1Q86SY8 53 aa5.05□□□□□ -1.6
VPS25-202ENST00000589219 FAT4Q6V0I7 4981 aa5.05□□□□□ -1.6
VPS25-202ENST00000589219 H1FX-AS1Q4G0G2 97 aa5.04□□□□□ -1.6
VPS25-202ENST00000589219 A0A1B0GU33 70 aa5.03□□□□□ -1.6
VPS25-202ENST00000589219 SEC61BP60468 96 aaKnown RBP5.03□□□□□ -1.6
VPS25-202ENST00000589219 RBM12B-AS1Q9P1G2 102 aa5.03□□□□□ -1.6
VPS25-202ENST00000589219 MUC17Q685J3 4493 aa5□□□□□ -1.61
VPS25-202ENST00000589219 H0YAA0 97 aa4.99□□□□□ -1.61
VPS25-202ENST00000589219 KRTAP10-6P60371 365 aaPredicted RBP4.92□□□□□ -1.62
VPS25-202ENST00000589219 KRTAP4-1Q9BYQ7 146 aa4.92□□□□□ -1.62
VPS25-202ENST00000589219 CSAG1Q6PB30 78 aa4.91□□□□□ -1.62
VPS25-202ENST00000589219 K7ERS5 55 aa4.9□□□□□ -1.63
VPS25-202ENST00000589219 ADM2Q7Z4H4 148 aa4.84□□□□□ -1.63
VPS25-202ENST00000589219 P0C880 135 aa4.83□□□□□ -1.64
VPS25-202ENST00000589219 KRTAP13-4Q3LI77 160 aa4.81□□□□□ -1.64
VPS25-202ENST00000589219 KRTAP19-2Q3LHN2 52 aa4.8□□□□□ -1.64
VPS25-202ENST00000589219 M0QZ58 72 aa4.79□□□□□ -1.64
VPS25-202ENST00000589219 MT1HP80294 61 aa4.79□□□□□ -1.64
VPS25-202ENST00000589219 CRCT1Q9UGL9 99 aa4.78□□□□□ -1.64
VPS25-202ENST00000589219 PRAC1Q96KF2 57 aa4.77□□□□□ -1.65
VPS25-202ENST00000589219 A0A0D9SG42 100 aa4.75□□□□□ -1.65
VPS25-202ENST00000589219 M0R2T5 61 aa4.75□□□□□ -1.65
VPS25-202ENST00000589219 ROMO1P60602 79 aa4.71□□□□□ -1.66
VPS25-202ENST00000589219 FSIP2Q5CZC0 6907 aa4.69□□□□□ -1.66
VPS25-202ENST00000589219 KRTAP12-1P59990 96 aa4.67□□□□□ -1.66
VPS25-202ENST00000589219 R4GN34 69 aa4.66□□□□□ -1.66
VPS25-202ENST00000589219 KRTAP12-2P59991 146 aa4.65□□□□□ -1.67
VPS25-202ENST00000589219 KRTAP25-1Q3LHN0 102 aa4.65□□□□□ -1.67
VPS25-202ENST00000589219 KRTAP5-3Q6L8H2 238 aa4.65□□□□□ -1.67
VPS25-202ENST00000589219 SPINT4Q6UDR6 99 aa4.63□□□□□ -1.67
VPS25-202ENST00000589219 FLGP20930 4061 aaPredicted RBP4.62□□□□□ -1.67
VPS25-202ENST00000589219 LINC01554Q52M75 96 aa4.62□□□□□ -1.67
VPS25-202ENST00000589219 CRIPTQ9P021 101 aa4.58□□□□□ -1.68
VPS25-202ENST00000589219 KRTAP9-8Q9BYQ0 159 aa4.52□□□□□ -1.69
VPS25-202ENST00000589219 MT2AP02795 61 aa4.43□□□□□ -1.7
VPS25-202ENST00000589219 KRTAP10-10P60014 251 aa4.42□□□□□ -1.7
VPS25-202ENST00000589219 USH2AO75445 5202 aa4.41□□□□□ -1.7
VPS25-202ENST00000589219 CAMK2N1Q7Z7J9 78 aa4.41□□□□□ -1.7
VPS25-202ENST00000589219 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
VPS25-202ENST00000589219 SSPOA2VEC9 5147 aa4.4□□□□□ -1.71
VPS25-202ENST00000589219 MT1FP04733 61 aa4.39□□□□□ -1.71
VPS25-202ENST00000589219 SPRR2GQ9BYE4 73 aa4.37□□□□□ -1.71
VPS25-202ENST00000589219 FCGBPQ9Y6R7 5405 aaPredicted RBP4.34□□□□□ -1.71
VPS25-202ENST00000589219 PP632Q6XCG6 107 aa4.31□□□□□ -1.72
VPS25-202ENST00000589219 PLAC4Q8WY50 150 aa4.29□□□□□ -1.72
VPS25-202ENST00000589219 KRTAP19-6Q3LI70 58 aa4.26□□□□□ -1.73
VPS25-202ENST00000589219 TNP1P09430 55 aa4.25□□□□□ -1.73
VPS25-202ENST00000589219 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
VPS25-202ENST00000589219 KRTAP19-8Q3LI54 63 aa4.23□□□□□ -1.73
VPS25-202ENST00000589219 KRTAP15-1Q3LI76 137 aa4.17□□□□□ -1.74
VPS25-202ENST00000589219 MACF1Q9UPN3 7388 aaKnown RBP4.15□□□□□ -1.75
VPS25-202ENST00000589219 KRTAP6-3Q3LI67 103 aa4.13□□□□□ -1.75
VPS25-202ENST00000589219 MT1BP07438 61 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms