RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 RPS28P62857 69 aaKnown RBP6.53□□□□□ -1.36
VMP1-202ENST00000585847 ACYP2P14621 99 aa6.52□□□□□ -1.37
VMP1-202ENST00000585847 KRTAP19-2Q3LHN2 52 aa6.52□□□□□ -1.37
VMP1-202ENST00000585847 SERP1Q9Y6X1 66 aa6.52□□□□□ -1.37
VMP1-202ENST00000585847 COX6B2Q6YFQ2 88 aa6.5□□□□□ -1.37
VMP1-202ENST00000585847 RBM12B-AS1Q9P1G2 102 aa6.5□□□□□ -1.37
VMP1-202ENST00000585847 CRCT1Q9UGL9 99 aa6.49□□□□□ -1.37
VMP1-202ENST00000585847 FSIP2Q5CZC0 6907 aa6.48□□□□□ -1.37
VMP1-202ENST00000585847 MPLKIPQ8TAP9 179 aa6.46□□□□□ -1.38
VMP1-202ENST00000585847 C4orf26Q17RF5 130 aa6.45□□□□□ -1.38
VMP1-202ENST00000585847 SPTSSBQ8NFR3 76 aa6.42□□□□□ -1.38
VMP1-202ENST00000585847 COA5Q86WW8 74 aa6.41□□□□□ -1.38
VMP1-202ENST00000585847 CHKB-CPT1BH3BT56 60 aa6.4□□□□□ -1.38
VMP1-202ENST00000585847 SMIM26A0A096LP01 95 aa6.36□□□□□ -1.39
VMP1-202ENST00000585847 H1FX-AS1Q4G0G2 97 aa6.36□□□□□ -1.39
VMP1-202ENST00000585847 FLGP20930 4061 aaPredicted RBP6.36□□□□□ -1.39
VMP1-202ENST00000585847 V9GYY9 64 aa6.34□□□□□ -1.39
VMP1-202ENST00000585847 KRTAP3-1Q9BYR8 98 aa6.33□□□□□ -1.4
VMP1-202ENST00000585847 MT1HP80294 61 aa6.32□□□□□ -1.4
VMP1-202ENST00000585847 S4R3F8 94 aa6.29□□□□□ -1.4
VMP1-202ENST00000585847 M0R2T5 61 aa6.26□□□□□ -1.41
VMP1-202ENST00000585847 Q1T7F1 81 aa6.23□□□□□ -1.41
VMP1-202ENST00000585847 KRTAP10-6P60371 365 aaPredicted RBP6.21□□□□□ -1.42
VMP1-202ENST00000585847 CSAG1Q6PB30 78 aa6.2□□□□□ -1.42
VMP1-202ENST00000585847 PRR15LQ9BU68 103 aa6.2□□□□□ -1.42
VMP1-202ENST00000585847 LCA10Q71F78 164 aa6.19□□□□□ -1.42
VMP1-202ENST00000585847 KRTAP4-8Q9BYQ9 185 aa6.19□□□□□ -1.42
VMP1-202ENST00000585847 LINC01558Q9Y6Z2 57 aa6.19□□□□□ -1.42
VMP1-202ENST00000585847 SEC61GP60059 68 aa6.18□□□□□ -1.42
VMP1-202ENST00000585847 H0YAA0 97 aa6.15□□□□□ -1.42
VMP1-202ENST00000585847 A0A1B0GU69 56 aa6.11□□□□□ -1.43
VMP1-202ENST00000585847 KRTAP9-7A8MTY7 169 aa6.07□□□□□ -1.44
VMP1-202ENST00000585847 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.06□□□□□ -1.44
VMP1-202ENST00000585847 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
VMP1-202ENST00000585847 USH2AO75445 5202 aa5.99□□□□□ -1.45
VMP1-202ENST00000585847 KRTAP4-12Q9BQ66 201 aa5.99□□□□□ -1.45
VMP1-202ENST00000585847 PSPHP1O15172 72 aa5.98□□□□□ -1.45
VMP1-202ENST00000585847 MT2AP02795 61 aa5.98□□□□□ -1.45
VMP1-202ENST00000585847 Q5VV11 94 aa5.98□□□□□ -1.45
VMP1-202ENST00000585847 UQCR11O14957 56 aa5.97□□□□□ -1.45
VMP1-202ENST00000585847 SSPOA2VEC9 5147 aa5.96□□□□□ -1.46
VMP1-202ENST00000585847 MT1FP04733 61 aa5.94□□□□□ -1.46
VMP1-202ENST00000585847 ADM2Q7Z4H4 148 aa5.94□□□□□ -1.46
VMP1-202ENST00000585847 CRIPTQ9P021 101 aa5.94□□□□□ -1.46
VMP1-202ENST00000585847 A0A1B0GU33 70 aa5.93□□□□□ -1.46
VMP1-202ENST00000585847 KRTAP19-1Q8IUB9 90 aa5.93□□□□□ -1.46
VMP1-202ENST00000585847 A6NED7 52 aa5.91□□□□□ -1.46
VMP1-202ENST00000585847 M0QZ58 72 aa5.91□□□□□ -1.46
VMP1-202ENST00000585847 LCE3BQ5TA77 95 aa5.91□□□□□ -1.46
VMP1-202ENST00000585847 FCGBPQ9Y6R7 5405 aaPredicted RBP5.87□□□□□ -1.47
VMP1-202ENST00000585847 KRTAP9-3Q9BYQ3 159 aa5.85□□□□□ -1.47
VMP1-202ENST00000585847 P0C880 135 aa5.84□□□□□ -1.47
VMP1-202ENST00000585847 KRTAP10-10P60014 251 aa5.84□□□□□ -1.47
VMP1-202ENST00000585847 CDC42SE1Q9NRR8 79 aa5.84□□□□□ -1.47
VMP1-202ENST00000585847 MIR22HGQ0VDD5 57 aa5.83□□□□□ -1.48
VMP1-202ENST00000585847 SPATA8Q6RVD6 105 aa5.82□□□□□ -1.48
VMP1-202ENST00000585847 R4GN34 69 aa5.82□□□□□ -1.48
VMP1-202ENST00000585847 H3BS24 57 aa5.81□□□□□ -1.48
VMP1-202ENST00000585847 KRTAP9-9Q9BYP9 154 aa5.78□□□□□ -1.48
VMP1-202ENST00000585847 KRTAP9-4Q9BYQ2 154 aa5.78□□□□□ -1.48
VMP1-202ENST00000585847 MACF1Q9UPN3 7388 aaKnown RBP5.76□□□□□ -1.49
VMP1-202ENST00000585847 BRK1Q8WUW1 75 aa5.75□□□□□ -1.49
VMP1-202ENST00000585847 A6NN06 94 aa5.73□□□□□ -1.49
VMP1-202ENST00000585847 K7ERS5 55 aa5.73□□□□□ -1.49
VMP1-202ENST00000585847 SYNE2Q8WXH0 6885 aaKnown RBP5.71□□□□□ -1.5
VMP1-202ENST00000585847 SPRR2GQ9BYE4 73 aa5.69□□□□□ -1.5
VMP1-202ENST00000585847 PRO0628Q9UI54 55 aa5.69□□□□□ -1.5
VMP1-202ENST00000585847 KRTAP13-4Q3LI77 160 aa5.67□□□□□ -1.5
VMP1-202ENST00000585847 KRTAP4-8A0A0G2JLE6 195 aa5.66□□□□□ -1.5
VMP1-202ENST00000585847 KRTAP19-6Q3LI70 58 aa5.6□□□□□ -1.51
VMP1-202ENST00000585847 A0A0D9SG42 100 aa5.59□□□□□ -1.51
VMP1-202ENST00000585847 A8MU10 97 aa5.58□□□□□ -1.52
VMP1-202ENST00000585847 KRTAP19-8Q3LI54 63 aa5.58□□□□□ -1.52
VMP1-202ENST00000585847 LINC01554Q52M75 96 aa5.57□□□□□ -1.52
VMP1-202ENST00000585847 MT1BP07438 61 aa5.56□□□□□ -1.52
VMP1-202ENST00000585847 KRTAP6-3Q3LI67 103 aa5.54□□□□□ -1.52
VMP1-202ENST00000585847 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
VMP1-202ENST00000585847 KRTAP12-1P59990 96 aa5.53□□□□□ -1.52
VMP1-202ENST00000585847 LCE1DQ5T752 114 aa5.53□□□□□ -1.52
VMP1-202ENST00000585847 LCE4AQ5TA78 99 aa5.51□□□□□ -1.53
VMP1-202ENST00000585847 SPINT4Q6UDR6 99 aa5.51□□□□□ -1.53
VMP1-202ENST00000585847 PLAC4Q8WY50 150 aa5.51□□□□□ -1.53
VMP1-202ENST00000585847 KRTAP12-2P59991 146 aa5.47□□□□□ -1.53
VMP1-202ENST00000585847 PMAIP1Q13794 54 aa5.47□□□□□ -1.53
VMP1-202ENST00000585847 KRTAP4-7Q9BYR0 210 aa5.45□□□□□ -1.54
VMP1-202ENST00000585847 CAMK2N1Q7Z7J9 78 aa5.44□□□□□ -1.54
VMP1-202ENST00000585847 NEBP20929 6669 aa5.38□□□□□ -1.55
VMP1-202ENST00000585847 ROMO1P60602 79 aa5.37□□□□□ -1.55
VMP1-202ENST00000585847 KRTAP4-9Q9BYQ8 210 aa5.35□□□□□ -1.55
VMP1-202ENST00000585847 PRO2289Q9P1D8 64 aa5.35□□□□□ -1.55
VMP1-202ENST00000585847 MUC12Q9UKN1 5478 aa5.34□□□□□ -1.55
VMP1-202ENST00000585847 KRTAP10-5P60370 271 aa5.33□□□□□ -1.56
VMP1-202ENST00000585847 KRTAP20-1Q3LI63 56 aa5.31□□□□□ -1.56
VMP1-202ENST00000585847 KTN1-AS1Q86SY8 53 aa5.28□□□□□ -1.56
VMP1-202ENST00000585847 MT1XP80297 61 aa5.27□□□□□ -1.57
VMP1-202ENST00000585847 KRTAP25-1Q3LHN0 102 aa5.26□□□□□ -1.57
VMP1-202ENST00000585847 TNP1P09430 55 aa5.21□□□□□ -1.58
VMP1-202ENST00000585847 KRTAP4-2Q9BYR5 136 aa5.21□□□□□ -1.58
VMP1-202ENST00000585847 C10orf95Q9H7T3 257 aa5.2□□□□□ -1.58
VMP1-202ENST00000585847 LCE5AQ5TCM9 118 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms