RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 ANAPC13Q9BS18 74 aa7.85□□□□□ -1.15
CSNK1D-223ENST00000584472 KRTAP9-8Q9BYQ0 159 aa7.8□□□□□ -1.16
CSNK1D-223ENST00000584472 A8MUN3 132 aa7.76□□□□□ -1.17
CSNK1D-223ENST00000584472 DMAC1Q96GE9 116 aa7.71□□□□□ -1.18
CSNK1D-223ENST00000584472 S4R3F8 94 aa7.71□□□□□ -1.18
CSNK1D-223ENST00000584472 LOC100996750A0A140TA64 210 aa7.7□□□□□ -1.18
CSNK1D-223ENST00000584472 KRTAP4-6Q9BYQ5 205 aa7.7□□□□□ -1.18
CSNK1D-223ENST00000584472 CCDC179H3BU77 68 aa7.69□□□□□ -1.18
CSNK1D-223ENST00000584472 NDUFC1O43677 76 aa7.69□□□□□ -1.18
CSNK1D-223ENST00000584472 MT2AP02795 61 aa7.69□□□□□ -1.18
CSNK1D-223ENST00000584472 SPANXA2-OT1Q8N9U9 137 aa7.69□□□□□ -1.18
CSNK1D-223ENST00000584472 CYSTM1Q9H1C7 97 aa7.69□□□□□ -1.18
CSNK1D-223ENST00000584472 LCA10Q71F78 164 aa7.68□□□□□ -1.18
CSNK1D-223ENST00000584472 H7BZZ5 65 aa7.65□□□□□ -1.18
CSNK1D-223ENST00000584472 MT1FP04733 61 aa7.62□□□□□ -1.19
CSNK1D-223ENST00000584472 USH2AO75445 5202 aa7.62□□□□□ -1.19
CSNK1D-223ENST00000584472 ACYP2P14621 99 aa7.61□□□□□ -1.19
CSNK1D-223ENST00000584472 KRTAP10-10P60014 251 aa7.6□□□□□ -1.19
CSNK1D-223ENST00000584472 CSAG1Q6PB30 78 aa7.59□□□□□ -1.19
CSNK1D-223ENST00000584472 SSPOA2VEC9 5147 aa7.57□□□□□ -1.2
CSNK1D-223ENST00000584472 KRTAP9-3Q9BYQ3 159 aa7.56□□□□□ -1.2
CSNK1D-223ENST00000584472 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.49□□□□□ -1.21
CSNK1D-223ENST00000584472 CHKB-CPT1BH3BT56 60 aa7.46□□□□□ -1.22
CSNK1D-223ENST00000584472 COA5Q86WW8 74 aa7.44□□□□□ -1.22
CSNK1D-223ENST00000584472 FCGBPQ9Y6R7 5405 aaPredicted RBP7.44□□□□□ -1.22
CSNK1D-223ENST00000584472 ATP5EP56381 51 aaPredicted RBP7.43□□□□□ -1.22
CSNK1D-223ENST00000584472 KRTAP9-7A8MTY7 169 aa7.42□□□□□ -1.22
CSNK1D-223ENST00000584472 PCP4P48539 62 aa7.42□□□□□ -1.22
CSNK1D-223ENST00000584472 TMEM258P61165 79 aa7.42□□□□□ -1.22
CSNK1D-223ENST00000584472 KRTAP19-1Q8IUB9 90 aa7.41□□□□□ -1.22
CSNK1D-223ENST00000584472 SPTSSBQ8NFR3 76 aa7.41□□□□□ -1.22
CSNK1D-223ENST00000584472 H0YAA0 97 aa7.39□□□□□ -1.23
CSNK1D-223ENST00000584472 KRTAP19-6Q3LI70 58 aa7.33□□□□□ -1.24
CSNK1D-223ENST00000584472 ADM2Q7Z4H4 148 aa7.32□□□□□ -1.24
CSNK1D-223ENST00000584472 P0C880 135 aa7.22□□□□□ -1.25
CSNK1D-223ENST00000584472 MACF1Q9UPN3 7388 aaKnown RBP7.22□□□□□ -1.25
CSNK1D-223ENST00000584472 CRIPTQ9P021 101 aa7.21□□□□□ -1.26
CSNK1D-223ENST00000584472 SPRR2GQ9BYE4 73 aa7.19□□□□□ -1.26
CSNK1D-223ENST00000584472 SERP1Q9Y6X1 66 aa7.19□□□□□ -1.26
CSNK1D-223ENST00000584472 SYNE2Q8WXH0 6885 aaKnown RBP7.13□□□□□ -1.27
CSNK1D-223ENST00000584472 SEC61GP60059 68 aa7.11□□□□□ -1.27
CSNK1D-223ENST00000584472 KRTAP19-8Q3LI54 63 aa7.11□□□□□ -1.27
CSNK1D-223ENST00000584472 R4GN34 69 aa7.09□□□□□ -1.27
CSNK1D-223ENST00000584472 Q5VV11 94 aa7.08□□□□□ -1.28
CSNK1D-223ENST00000584472 M0QZ58 72 aa7.06□□□□□ -1.28
CSNK1D-223ENST00000584472 A0A1B0GU69 56 aa7.05□□□□□ -1.28
CSNK1D-223ENST00000584472 MT1BP07438 61 aa7.05□□□□□ -1.28
CSNK1D-223ENST00000584472 LINC01558Q9Y6Z2 57 aa7.03□□□□□ -1.28
CSNK1D-223ENST00000584472 KRTAP6-3Q3LI67 103 aa7.02□□□□□ -1.29
CSNK1D-223ENST00000584472 RPS28P62857 69 aaKnown RBP6.99□□□□□ -1.29
CSNK1D-223ENST00000584472 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
CSNK1D-223ENST00000584472 A0A1B0GU33 70 aa6.96□□□□□ -1.3
CSNK1D-223ENST00000584472 PRR15LQ9BU68 103 aa6.96□□□□□ -1.3
CSNK1D-223ENST00000584472 KRTAP13-4Q3LI77 160 aa6.95□□□□□ -1.3
CSNK1D-223ENST00000584472 SMIM26A0A096LP01 95 aa6.94□□□□□ -1.3
CSNK1D-223ENST00000584472 LINC01554Q52M75 96 aa6.92□□□□□ -1.3
CSNK1D-223ENST00000584472 A6NN06 94 aa6.91□□□□□ -1.3
CSNK1D-223ENST00000584472 Q1T7F1 81 aa6.91□□□□□ -1.3
CSNK1D-223ENST00000584472 V9GYY9 64 aa6.91□□□□□ -1.3
CSNK1D-223ENST00000584472 KRTAP10-5P60370 271 aa6.87□□□□□ -1.31
CSNK1D-223ENST00000584472 SPATA8Q6RVD6 105 aa6.87□□□□□ -1.31
CSNK1D-223ENST00000584472 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
CSNK1D-223ENST00000584472 PSPHP1O15172 72 aa6.8□□□□□ -1.32
CSNK1D-223ENST00000584472 A0A0D9SG42 100 aa6.76□□□□□ -1.33
CSNK1D-223ENST00000584472 UQCR11O14957 56 aa6.75□□□□□ -1.33
CSNK1D-223ENST00000584472 NEBP20929 6669 aa6.73□□□□□ -1.33
CSNK1D-223ENST00000584472 PRO2289Q9P1D8 64 aa6.72□□□□□ -1.33
CSNK1D-223ENST00000584472 A8MU10 97 aa6.71□□□□□ -1.34
CSNK1D-223ENST00000584472 KRTAP5-9P26371 169 aa6.7□□□□□ -1.34
CSNK1D-223ENST00000584472 MUC12Q9UKN1 5478 aa6.69□□□□□ -1.34
CSNK1D-223ENST00000584472 SVIPQ8NHG7 77 aa6.69□□□□□ -1.34
CSNK1D-223ENST00000584472 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
CSNK1D-223ENST00000584472 MT1XP80297 61 aa6.67□□□□□ -1.34
CSNK1D-223ENST00000584472 MIR22HGQ0VDD5 57 aa6.65□□□□□ -1.34
CSNK1D-223ENST00000584472 LCE3BQ5TA77 95 aa6.64□□□□□ -1.35
CSNK1D-223ENST00000584472 SPINT4Q6UDR6 99 aa6.64□□□□□ -1.35
CSNK1D-223ENST00000584472 KRTAP12-2P59991 146 aa6.62□□□□□ -1.35
CSNK1D-223ENST00000584472 KRTAP4-12Q9BQ66 201 aa6.61□□□□□ -1.35
CSNK1D-223ENST00000584472 KMT2DO14686 5537 aa6.6□□□□□ -1.35
CSNK1D-223ENST00000584472 A6NED7 52 aa6.59□□□□□ -1.35
CSNK1D-223ENST00000584472 CAMK2N1Q7Z7J9 78 aa6.58□□□□□ -1.36
CSNK1D-223ENST00000584472 KRTAP9-9Q9BYP9 154 aa6.55□□□□□ -1.36
CSNK1D-223ENST00000584472 KRTAP9-4Q9BYQ2 154 aa6.55□□□□□ -1.36
CSNK1D-223ENST00000584472 MDN1Q9NU22 5596 aa6.54□□□□□ -1.36
CSNK1D-223ENST00000584472 KRTAP20-1Q3LI63 56 aa6.49□□□□□ -1.37
CSNK1D-223ENST00000584472 KRTAP4-8A0A0G2JLE6 195 aa6.46□□□□□ -1.38
CSNK1D-223ENST00000584472 CDC42SE1Q9NRR8 79 aa6.42□□□□□ -1.38
CSNK1D-223ENST00000584472 K7ERS5 55 aa6.41□□□□□ -1.38
CSNK1D-223ENST00000584472 SPRR2FQ96RM1 72 aa6.37□□□□□ -1.39
CSNK1D-223ENST00000584472 KRTAP10-7P60409 375 aaPredicted RBP6.36□□□□□ -1.39
CSNK1D-223ENST00000584472 KRTAP10-12P60413 245 aa6.35□□□□□ -1.39
CSNK1D-223ENST00000584472 KRTAP8-1Q8IUC2 63 aa6.35□□□□□ -1.39
CSNK1D-223ENST00000584472 KRTAP2-3P0C7H8 128 aa6.34□□□□□ -1.39
CSNK1D-223ENST00000584472 KRTAP2-4Q9BYR9 128 aa6.34□□□□□ -1.39
CSNK1D-223ENST00000584472 C10orf95Q9H7T3 257 aa6.33□□□□□ -1.4
CSNK1D-223ENST00000584472 SPRR2EP22531 72 aa6.3□□□□□ -1.4
CSNK1D-223ENST00000584472 SPRR2BP35325 72 aa6.3□□□□□ -1.4
CSNK1D-223ENST00000584472 SPRR2AP35326 72 aa6.3□□□□□ -1.4
CSNK1D-223ENST00000584472 LCE1AQ5T7P2 110 aa6.25□□□□□ -1.41
CSNK1D-223ENST00000584472 KRTAP4-7Q9BYR0 210 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms