RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 CCDC179H3BU77 68 aa7.69□□□□□ -1.18
CSNK1D-212ENST00000580061 NDUFC1O43677 76 aa7.69□□□□□ -1.18
CSNK1D-212ENST00000580061 SPANXA2-OT1Q8N9U9 137 aa7.69□□□□□ -1.18
CSNK1D-212ENST00000580061 CYSTM1Q9H1C7 97 aa7.69□□□□□ -1.18
CSNK1D-212ENST00000580061 KRTAP10-6P60371 365 aaPredicted RBP7.68□□□□□ -1.18
CSNK1D-212ENST00000580061 LCA10Q71F78 164 aa7.68□□□□□ -1.18
CSNK1D-212ENST00000580061 LORP23490 312 aaPredicted RBP7.66□□□□□ -1.18
CSNK1D-212ENST00000580061 H7BZZ5 65 aa7.65□□□□□ -1.18
CSNK1D-212ENST00000580061 ACYP2P14621 99 aa7.61□□□□□ -1.19
CSNK1D-212ENST00000580061 CSAG1Q6PB30 78 aa7.59□□□□□ -1.19
CSNK1D-212ENST00000580061 KRTAP9-8Q9BYQ0 159 aa7.57□□□□□ -1.2
CSNK1D-212ENST00000580061 MT2AP02795 61 aa7.51□□□□□ -1.21
CSNK1D-212ENST00000580061 CHKB-CPT1BH3BT56 60 aa7.46□□□□□ -1.22
CSNK1D-212ENST00000580061 MT1FP04733 61 aa7.45□□□□□ -1.22
CSNK1D-212ENST00000580061 COA5Q86WW8 74 aa7.44□□□□□ -1.22
CSNK1D-212ENST00000580061 ATP5EP56381 51 aaPredicted RBP7.43□□□□□ -1.22
CSNK1D-212ENST00000580061 PCP4P48539 62 aa7.42□□□□□ -1.22
CSNK1D-212ENST00000580061 TMEM258P61165 79 aa7.42□□□□□ -1.22
CSNK1D-212ENST00000580061 KRTAP10-10P60014 251 aa7.41□□□□□ -1.22
CSNK1D-212ENST00000580061 SPTSSBQ8NFR3 76 aa7.41□□□□□ -1.22
CSNK1D-212ENST00000580061 H0YAA0 97 aa7.39□□□□□ -1.23
CSNK1D-212ENST00000580061 ADM2Q7Z4H4 148 aa7.32□□□□□ -1.24
CSNK1D-212ENST00000580061 KRTAP9-3Q9BYQ3 159 aa7.31□□□□□ -1.24
CSNK1D-212ENST00000580061 KRTAP9-2Q9BYQ4 174 aa7.25□□□□□ -1.25
CSNK1D-212ENST00000580061 P0C880 135 aa7.22□□□□□ -1.25
CSNK1D-212ENST00000580061 CRIPTQ9P021 101 aa7.21□□□□□ -1.26
CSNK1D-212ENST00000580061 SERP1Q9Y6X1 66 aa7.19□□□□□ -1.26
CSNK1D-212ENST00000580061 KRTAP19-1Q8IUB9 90 aa7.18□□□□□ -1.26
CSNK1D-212ENST00000580061 SPRR2GQ9BYE4 73 aa7.16□□□□□ -1.26
CSNK1D-212ENST00000580061 SEC61GP60059 68 aa7.11□□□□□ -1.27
CSNK1D-212ENST00000580061 R4GN34 69 aa7.09□□□□□ -1.27
CSNK1D-212ENST00000580061 USH2AO75445 5202 aa7.08□□□□□ -1.28
CSNK1D-212ENST00000580061 M0QZ58 72 aa7.06□□□□□ -1.28
CSNK1D-212ENST00000580061 A0A1B0GU69 56 aa7.05□□□□□ -1.28
CSNK1D-212ENST00000580061 KRTAP19-8Q3LI54 63 aa7.04□□□□□ -1.28
CSNK1D-212ENST00000580061 LINC01558Q9Y6Z2 57 aa7.03□□□□□ -1.28
CSNK1D-212ENST00000580061 FSIP2Q5CZC0 6907 aa7.03□□□□□ -1.28
CSNK1D-212ENST00000580061 RPS28P62857 69 aaKnown RBP6.99□□□□□ -1.29
CSNK1D-212ENST00000580061 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
CSNK1D-212ENST00000580061 MT1BP07438 61 aa6.98□□□□□ -1.29
CSNK1D-212ENST00000580061 Q5VV11 94 aa6.98□□□□□ -1.29
CSNK1D-212ENST00000580061 A0A1B0GU33 70 aa6.96□□□□□ -1.3
CSNK1D-212ENST00000580061 PRR15LQ9BU68 103 aa6.96□□□□□ -1.3
CSNK1D-212ENST00000580061 KRTAP13-4Q3LI77 160 aa6.95□□□□□ -1.3
CSNK1D-212ENST00000580061 SMIM26A0A096LP01 95 aa6.94□□□□□ -1.3
CSNK1D-212ENST00000580061 CRCT1Q9UGL9 99 aa6.93□□□□□ -1.3
CSNK1D-212ENST00000580061 LINC01554Q52M75 96 aa6.92□□□□□ -1.3
CSNK1D-212ENST00000580061 SSPOA2VEC9 5147 aa6.92□□□□□ -1.3
CSNK1D-212ENST00000580061 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.91□□□□□ -1.3
CSNK1D-212ENST00000580061 Q1T7F1 81 aa6.91□□□□□ -1.3
CSNK1D-212ENST00000580061 V9GYY9 64 aa6.91□□□□□ -1.3
CSNK1D-212ENST00000580061 SPATA8Q6RVD6 105 aa6.87□□□□□ -1.31
CSNK1D-212ENST00000580061 KRTAP9-6A0A140TA67 174 aa6.86□□□□□ -1.31
CSNK1D-212ENST00000580061 KRTAP19-6Q3LI70 58 aa6.84□□□□□ -1.31
CSNK1D-212ENST00000580061 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
CSNK1D-212ENST00000580061 A6NN06 94 aa6.81□□□□□ -1.32
CSNK1D-212ENST00000580061 PSPHP1O15172 72 aa6.8□□□□□ -1.32
CSNK1D-212ENST00000580061 A0A0D9SG42 100 aa6.76□□□□□ -1.33
CSNK1D-212ENST00000580061 UQCR11O14957 56 aa6.75□□□□□ -1.33
CSNK1D-212ENST00000580061 A8MU10 97 aa6.71□□□□□ -1.34
CSNK1D-212ENST00000580061 KRTAP10-5P60370 271 aa6.71□□□□□ -1.34
CSNK1D-212ENST00000580061 FCGBPQ9Y6R7 5405 aaPredicted RBP6.7□□□□□ -1.34
CSNK1D-212ENST00000580061 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
CSNK1D-212ENST00000580061 MT1XP80297 61 aa6.65□□□□□ -1.34
CSNK1D-212ENST00000580061 MIR22HGQ0VDD5 57 aa6.65□□□□□ -1.34
CSNK1D-212ENST00000580061 LCE3BQ5TA77 95 aa6.64□□□□□ -1.35
CSNK1D-212ENST00000580061 SPINT4Q6UDR6 99 aa6.64□□□□□ -1.35
CSNK1D-212ENST00000580061 PRO2289Q9P1D8 64 aa6.63□□□□□ -1.35
CSNK1D-212ENST00000580061 KRTAP12-2P59991 146 aa6.62□□□□□ -1.35
CSNK1D-212ENST00000580061 KRTAP4-12Q9BQ66 201 aa6.61□□□□□ -1.35
CSNK1D-212ENST00000580061 A6NED7 52 aa6.59□□□□□ -1.35
CSNK1D-212ENST00000580061 CAMK2N1Q7Z7J9 78 aa6.58□□□□□ -1.36
CSNK1D-212ENST00000580061 KRTAP9-9Q9BYP9 154 aa6.55□□□□□ -1.36
CSNK1D-212ENST00000580061 KRTAP9-4Q9BYQ2 154 aa6.55□□□□□ -1.36
CSNK1D-212ENST00000580061 KRTAP4-8A0A0G2JLE6 195 aa6.46□□□□□ -1.38
CSNK1D-212ENST00000580061 MACF1Q9UPN3 7388 aaKnown RBP6.45□□□□□ -1.38
CSNK1D-212ENST00000580061 CDC42SE1Q9NRR8 79 aa6.42□□□□□ -1.38
CSNK1D-212ENST00000580061 K7ERS5 55 aa6.41□□□□□ -1.38
CSNK1D-212ENST00000580061 KRTAP10-7P60409 375 aaPredicted RBP6.36□□□□□ -1.39
CSNK1D-212ENST00000580061 KRTAP10-12P60413 245 aa6.33□□□□□ -1.4
CSNK1D-212ENST00000580061 C10orf95Q9H7T3 257 aa6.33□□□□□ -1.4
CSNK1D-212ENST00000580061 SYNE2Q8WXH0 6885 aaKnown RBP6.3□□□□□ -1.4
CSNK1D-212ENST00000580061 KMT2DO14686 5537 aa6.27□□□□□ -1.4
CSNK1D-212ENST00000580061 KRTAP4-7Q9BYR0 210 aa6.24□□□□□ -1.41
CSNK1D-212ENST00000580061 BRK1Q8WUW1 75 aa6.22□□□□□ -1.41
CSNK1D-212ENST00000580061 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.42
CSNK1D-212ENST00000580061 TNP1P09430 55 aa6.2□□□□□ -1.42
CSNK1D-212ENST00000580061 LCE1DQ5T752 114 aa6.2□□□□□ -1.42
CSNK1D-212ENST00000580061 KRTAP6-3Q3LI67 103 aa6.17□□□□□ -1.42
CSNK1D-212ENST00000580061 KRTAP8-1Q8IUC2 63 aa6.15□□□□□ -1.42
CSNK1D-212ENST00000580061 KRTAP5-9P26371 169 aa6.1□□□□□ -1.43
CSNK1D-212ENST00000580061 ROMO1P60602 79 aa6.09□□□□□ -1.43
CSNK1D-212ENST00000580061 KRTAP25-1Q3LHN0 102 aa6.09□□□□□ -1.43
CSNK1D-212ENST00000580061 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
CSNK1D-212ENST00000580061 LCE3AQ5TA76 89 aa6.02□□□□□ -1.45
CSNK1D-212ENST00000580061 SPRR2FQ96RM1 72 aa6.02□□□□□ -1.45
CSNK1D-212ENST00000580061 KRTAP4-2Q9BYR5 136 aa6.01□□□□□ -1.45
CSNK1D-212ENST00000580061 MUC12Q9UKN1 5478 aa5.97□□□□□ -1.45
CSNK1D-212ENST00000580061 KRTAP19-7Q3SYF9 63 aa5.95□□□□□ -1.46
CSNK1D-212ENST00000580061 KRTAP19-5Q3LI72 72 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms