RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 TP53AIP1Q9HCN2 124 aa4.66□□□□□ -1.66
NPLOC4-220ENST00000576940 H3BPC8 53 aa4.65□□□□□ -1.67
NPLOC4-220ENST00000576940 C5orf47Q569G3 176 aa4.64□□□□□ -1.67
NPLOC4-220ENST00000576940 KRTAP5-9P26371 169 aa4.63□□□□□ -1.67
NPLOC4-220ENST00000576940 H1FX-AS1Q4G0G2 97 aa4.63□□□□□ -1.67
NPLOC4-220ENST00000576940 MRPL34Q9BQ48 92 aaKnown RBP4.63□□□□□ -1.67
NPLOC4-220ENST00000576940 MT1BP07438 61 aa4.62□□□□□ -1.67
NPLOC4-220ENST00000576940 CCDC179H3BU77 68 aa4.61□□□□□ -1.67
NPLOC4-220ENST00000576940 NDUFC1O43677 76 aa4.61□□□□□ -1.67
NPLOC4-220ENST00000576940 KRTAP2-3P0C7H8 128 aa4.6□□□□□ -1.67
NPLOC4-220ENST00000576940 KRTAP2-4Q9BYR9 128 aa4.6□□□□□ -1.67
NPLOC4-220ENST00000576940 TRAV22A0A0B4J277 110 aa4.58□□□□□ -1.68
NPLOC4-220ENST00000576940 MP68P56378 58 aa4.56□□□□□ -1.68
NPLOC4-220ENST00000576940 KRTAP10-5P60370 271 aa4.56□□□□□ -1.68
NPLOC4-220ENST00000576940 TMEM258P61165 79 aa4.56□□□□□ -1.68
NPLOC4-220ENST00000576940 Q5VV11 94 aa4.56□□□□□ -1.68
NPLOC4-220ENST00000576940 C20orf197Q8N268 126 aa4.56□□□□□ -1.68
NPLOC4-220ENST00000576940 H7BZZ5 65 aa4.54□□□□□ -1.68
NPLOC4-220ENST00000576940 H0Y9P7 68 aa4.53□□□□□ -1.68
NPLOC4-220ENST00000576940 ATP5EP56381 51 aaPredicted RBP4.53□□□□□ -1.68
NPLOC4-220ENST00000576940 KRTAP19-8Q3LI54 63 aa4.53□□□□□ -1.68
NPLOC4-220ENST00000576940 LOC101927531A0A1B0GV80 90 aa4.52□□□□□ -1.69
NPLOC4-220ENST00000576940 SPANXA2-OT1Q8N9U9 137 aa4.51□□□□□ -1.69
NPLOC4-220ENST00000576940 CYSTM1Q9H1C7 97 aa4.51□□□□□ -1.69
NPLOC4-220ENST00000576940 SPRR2GQ9BYE4 73 aa4.5□□□□□ -1.69
NPLOC4-220ENST00000576940 NDUFS5O43920 106 aa4.48□□□□□ -1.69
NPLOC4-220ENST00000576940 Q5W150 140 aa4.48□□□□□ -1.69
NPLOC4-220ENST00000576940 C1orf64Q8NEQ6 169 aa4.48□□□□□ -1.69
NPLOC4-220ENST00000576940 LINC00208Q96KT6 92 aa4.48□□□□□ -1.69
NPLOC4-220ENST00000576940 SNURFQ9Y675 71 aa4.48□□□□□ -1.69
NPLOC4-220ENST00000576940 IGKV2D-30A0A075B6S6 120 aa4.47□□□□□ -1.69
NPLOC4-220ENST00000576940 IGKV2-30P06310 120 aa4.47□□□□□ -1.69
NPLOC4-220ENST00000576940 RPS28P62857 69 aaKnown RBP4.46□□□□□ -1.7
NPLOC4-220ENST00000576940 CYP4F30PQ9H0H9 118 aa4.46□□□□□ -1.7
NPLOC4-220ENST00000576940 SPRR2EP22531 72 aa4.45□□□□□ -1.7
NPLOC4-220ENST00000576940 SPRR2BP35325 72 aa4.45□□□□□ -1.7
NPLOC4-220ENST00000576940 SPRR2AP35326 72 aa4.45□□□□□ -1.7
NPLOC4-220ENST00000576940 C4orf26Q17RF5 130 aa4.45□□□□□ -1.7
NPLOC4-220ENST00000576940 SPRR2FQ96RM1 72 aa4.44□□□□□ -1.7
NPLOC4-220ENST00000576940 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
NPLOC4-220ENST00000576940 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
NPLOC4-220ENST00000576940 C7orf65Q6ZTY9 151 aa4.41□□□□□ -1.7
NPLOC4-220ENST00000576940 SERP1Q9Y6X1 66 aa4.4□□□□□ -1.71
NPLOC4-220ENST00000576940 CSAG1Q6PB30 78 aa4.39□□□□□ -1.71
NPLOC4-220ENST00000576940 KRTAP3-1Q9BYR8 98 aa4.39□□□□□ -1.71
NPLOC4-220ENST00000576940 S4R3F8 94 aa4.37□□□□□ -1.71
NPLOC4-220ENST00000576940 LCA10Q71F78 164 aa4.36□□□□□ -1.71
NPLOC4-220ENST00000576940 DMAC1Q96GE9 116 aa4.36□□□□□ -1.71
NPLOC4-220ENST00000576940 A8MUN3 132 aa4.35□□□□□ -1.71
NPLOC4-220ENST00000576940 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
NPLOC4-220ENST00000576940 GPR98Q8WXG9 6306 aa4.33□□□□□ -1.72
NPLOC4-220ENST00000576940 SPRR2DP22532 72 aa4.31□□□□□ -1.72
NPLOC4-220ENST00000576940 KRTAP8-1Q8IUC2 63 aa4.3□□□□□ -1.72
NPLOC4-220ENST00000576940 ACYP2P14621 99 aa4.29□□□□□ -1.72
NPLOC4-220ENST00000576940 SMIM26A0A096LP01 95 aa4.28□□□□□ -1.72
NPLOC4-220ENST00000576940 KRTAP3-3Q9BYR6 98 aa4.28□□□□□ -1.72
NPLOC4-220ENST00000576940 COA5Q86WW8 74 aa4.26□□□□□ -1.73
NPLOC4-220ENST00000576940 CRIPTQ9P021 101 aa4.26□□□□□ -1.73
NPLOC4-220ENST00000576940 MT1XP80297 61 aa4.24□□□□□ -1.73
NPLOC4-220ENST00000576940 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
NPLOC4-220ENST00000576940 LCE3BQ5TA77 95 aa4.23□□□□□ -1.73
NPLOC4-220ENST00000576940 KRTAP4-8Q9BYQ9 185 aa4.23□□□□□ -1.73
NPLOC4-220ENST00000576940 Q1T7F1 81 aa4.22□□□□□ -1.73
NPLOC4-220ENST00000576940 PRO2289Q9P1D8 64 aa4.22□□□□□ -1.73
NPLOC4-220ENST00000576940 V9GYY9 64 aa4.22□□□□□ -1.73
NPLOC4-220ENST00000576940 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
NPLOC4-220ENST00000576940 KRTAP12-2P59991 146 aa4.17□□□□□ -1.74
NPLOC4-220ENST00000576940 SPTSSBQ8NFR3 76 aa4.17□□□□□ -1.74
NPLOC4-220ENST00000576940 LINC01558Q9Y6Z2 57 aa4.16□□□□□ -1.74
NPLOC4-220ENST00000576940 CHKB-CPT1BH3BT56 60 aa4.14□□□□□ -1.75
NPLOC4-220ENST00000576940 PLAC4Q8WY50 150 aa4.14□□□□□ -1.75
NPLOC4-220ENST00000576940 ADM2Q7Z4H4 148 aa4.09□□□□□ -1.75
NPLOC4-220ENST00000576940 H0YAA0 97 aa4.08□□□□□ -1.76
NPLOC4-220ENST00000576940 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
NPLOC4-220ENST00000576940 KRTAP4-9Q9BYQ8 210 aa4.07□□□□□ -1.76
NPLOC4-220ENST00000576940 PRR15LQ9BU68 103 aa4.06□□□□□ -1.76
NPLOC4-220ENST00000576940 A0A1B0GU69 56 aa4.02□□□□□ -1.77
NPLOC4-220ENST00000576940 KRTAP10-12P60413 245 aa4.02□□□□□ -1.77
NPLOC4-220ENST00000576940 SEC61GP60059 68 aa4□□□□□ -1.77
NPLOC4-220ENST00000576940 PSPHP1O15172 72 aa3.99□□□□□ -1.77
NPLOC4-220ENST00000576940 R4GN34 69 aa3.99□□□□□ -1.77
NPLOC4-220ENST00000576940 P0C880 135 aa3.96□□□□□ -1.78
NPLOC4-220ENST00000576940 M0QZ58 72 aa3.95□□□□□ -1.78
NPLOC4-220ENST00000576940 UQCR11O14957 56 aa3.95□□□□□ -1.78
NPLOC4-220ENST00000576940 LINC01554Q52M75 96 aa3.95□□□□□ -1.78
NPLOC4-220ENST00000576940 KRTAP3-2Q9BYR7 98 aa3.95□□□□□ -1.78
NPLOC4-220ENST00000576940 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
NPLOC4-220ENST00000576940 CDC42SE1Q9NRR8 79 aa3.93□□□□□ -1.78
NPLOC4-220ENST00000576940 A6NED7 52 aa3.91□□□□□ -1.78
NPLOC4-220ENST00000576940 A0A1B0GU33 70 aa3.9□□□□□ -1.79
NPLOC4-220ENST00000576940 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
NPLOC4-220ENST00000576940 PRO0628Q9UI54 55 aa3.89□□□□□ -1.79
NPLOC4-220ENST00000576940 HMCN1Q96RW7 5635 aa3.89□□□□□ -1.79
NPLOC4-220ENST00000576940 LCE5AQ5TCM9 118 aa3.87□□□□□ -1.79
NPLOC4-220ENST00000576940 MIR22HGQ0VDD5 57 aa3.86□□□□□ -1.79
NPLOC4-220ENST00000576940 BRK1Q8WUW1 75 aa3.86□□□□□ -1.79
NPLOC4-220ENST00000576940 AHNAK2Q8IVF2 5795 aa3.84□□□□□ -1.79
NPLOC4-220ENST00000576940 MT4P47944 62 aa3.83□□□□□ -1.8
NPLOC4-220ENST00000576940 KRTAP19-3Q7Z4W3 81 aa3.81□□□□□ -1.8
NPLOC4-220ENST00000576940 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms