RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 KRTAP10-10P60014 251 aa4.42□□□□□ -1.7
NPLOC4-204ENST00000570324 CASC2Q6XLA1 102 aa4.42□□□□□ -1.7
NPLOC4-204ENST00000570324 Q8N9P0 234 aaPredicted RBP4.41□□□□□ -1.7
NPLOC4-204ENST00000570324 WFDC13Q8IUB5 93 aa4.39□□□□□ -1.71
NPLOC4-204ENST00000570324 H0Y9P7 68 aa4.38□□□□□ -1.71
NPLOC4-204ENST00000570324 NDUFS5O43920 106 aa4.38□□□□□ -1.71
NPLOC4-204ENST00000570324 BRK1Q8WUW1 75 aa4.38□□□□□ -1.71
NPLOC4-204ENST00000570324 LINC00208Q96KT6 92 aa4.38□□□□□ -1.71
NPLOC4-204ENST00000570324 MT1FP04733 61 aa4.37□□□□□ -1.71
NPLOC4-204ENST00000570324 MRPL34Q9BQ48 92 aaKnown RBP4.36□□□□□ -1.71
NPLOC4-204ENST00000570324 MMP24-AS1A0A0U1RRL7 71 aa4.35□□□□□ -1.71
NPLOC4-204ENST00000570324 LOC101927531A0A1B0GV80 90 aa4.35□□□□□ -1.71
NPLOC4-204ENST00000570324 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.34□□□□□ -1.71
NPLOC4-204ENST00000570324 KRTAP9-3Q9BYQ3 159 aa4.33□□□□□ -1.72
NPLOC4-204ENST00000570324 KRTAP9-7A8MTY7 169 aa4.32□□□□□ -1.72
NPLOC4-204ENST00000570324 LCE2BO14633 110 aa4.32□□□□□ -1.72
NPLOC4-204ENST00000570324 KRTAP19-1Q8IUB9 90 aa4.31□□□□□ -1.72
NPLOC4-204ENST00000570324 IGKV2D-30A0A075B6S6 120 aa4.3□□□□□ -1.72
NPLOC4-204ENST00000570324 IGKV2-30P06310 120 aa4.3□□□□□ -1.72
NPLOC4-204ENST00000570324 LINC01558Q9Y6Z2 57 aa4.3□□□□□ -1.72
NPLOC4-204ENST00000570324 H1FX-AS1Q4G0G2 97 aa4.29□□□□□ -1.72
NPLOC4-204ENST00000570324 Q5VV11 94 aa4.29□□□□□ -1.72
NPLOC4-204ENST00000570324 USH2AO75445 5202 aa4.29□□□□□ -1.72
NPLOC4-204ENST00000570324 PMAIP1Q13794 54 aa4.28□□□□□ -1.72
NPLOC4-204ENST00000570324 C7orf65Q6ZTY9 151 aa4.27□□□□□ -1.73
NPLOC4-204ENST00000570324 COA5Q86WW8 74 aa4.27□□□□□ -1.73
NPLOC4-204ENST00000570324 SSPOA2VEC9 5147 aa4.26□□□□□ -1.73
NPLOC4-204ENST00000570324 A8MUN3 132 aa4.26□□□□□ -1.73
NPLOC4-204ENST00000570324 PSPHP1O15172 72 aa4.25□□□□□ -1.73
NPLOC4-204ENST00000570324 Q5W150 140 aa4.24□□□□□ -1.73
NPLOC4-204ENST00000570324 CDC42SE1Q9NRR8 79 aa4.24□□□□□ -1.73
NPLOC4-204ENST00000570324 CHKB-CPT1BH3BT56 60 aa4.23□□□□□ -1.73
NPLOC4-204ENST00000570324 ACYP2P14621 99 aa4.23□□□□□ -1.73
NPLOC4-204ENST00000570324 PRR15LQ9BU68 103 aa4.21□□□□□ -1.74
NPLOC4-204ENST00000570324 KRTAP19-6Q3LI70 58 aa4.2□□□□□ -1.74
NPLOC4-204ENST00000570324 SEC61GP60059 68 aa4.19□□□□□ -1.74
NPLOC4-204ENST00000570324 A6NED7 52 aa4.18□□□□□ -1.74
NPLOC4-204ENST00000570324 KTN1-AS1Q86SY8 53 aa4.18□□□□□ -1.74
NPLOC4-204ENST00000570324 FCGBPQ9Y6R7 5405 aaPredicted RBP4.18□□□□□ -1.74
NPLOC4-204ENST00000570324 DMAC1Q96GE9 116 aa4.16□□□□□ -1.74
NPLOC4-204ENST00000570324 LCA10Q71F78 164 aa4.15□□□□□ -1.75
NPLOC4-204ENST00000570324 A6NN06 94 aa4.14□□□□□ -1.75
NPLOC4-204ENST00000570324 S4R3F8 94 aa4.14□□□□□ -1.75
NPLOC4-204ENST00000570324 CSAG1Q6PB30 78 aa4.13□□□□□ -1.75
NPLOC4-204ENST00000570324 SPATA8Q6RVD6 105 aa4.08□□□□□ -1.76
NPLOC4-204ENST00000570324 SPTSSBQ8NFR3 76 aa4.08□□□□□ -1.76
NPLOC4-204ENST00000570324 KRTAP3-1Q9BYR8 98 aa4.08□□□□□ -1.76
NPLOC4-204ENST00000570324 A0A1B0GU69 56 aa4.06□□□□□ -1.76
NPLOC4-204ENST00000570324 UQCR11O14957 56 aa4.06□□□□□ -1.76
NPLOC4-204ENST00000570324 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
NPLOC4-204ENST00000570324 A8MU10 97 aa4.02□□□□□ -1.77
NPLOC4-204ENST00000570324 SPRR2GQ9BYE4 73 aa4.01□□□□□ -1.77
NPLOC4-204ENST00000570324 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
NPLOC4-204ENST00000570324 MT1BP07438 61 aa3.99□□□□□ -1.77
NPLOC4-204ENST00000570324 MIR22HGQ0VDD5 57 aa3.99□□□□□ -1.77
NPLOC4-204ENST00000570324 KRTAP19-8Q3LI54 63 aa3.98□□□□□ -1.77
NPLOC4-204ENST00000570324 KRTAP3-3Q9BYR6 98 aa3.98□□□□□ -1.77
NPLOC4-204ENST00000570324 CRIPTQ9P021 101 aa3.98□□□□□ -1.77
NPLOC4-204ENST00000570324 SYNE2Q8WXH0 6885 aaKnown RBP3.95□□□□□ -1.78
NPLOC4-204ENST00000570324 KRTAP10-5P60370 271 aa3.94□□□□□ -1.78
NPLOC4-204ENST00000570324 H0YAA0 97 aa3.89□□□□□ -1.79
NPLOC4-204ENST00000570324 ADM2Q7Z4H4 148 aa3.89□□□□□ -1.79
NPLOC4-204ENST00000570324 LINC01554Q52M75 96 aa3.87□□□□□ -1.79
NPLOC4-204ENST00000570324 A0A1B0GU33 70 aa3.83□□□□□ -1.8
NPLOC4-204ENST00000570324 K7ERS5 55 aa3.83□□□□□ -1.8
NPLOC4-204ENST00000570324 PLAC4Q8WY50 150 aa3.83□□□□□ -1.8
NPLOC4-204ENST00000570324 PRO2289Q9P1D8 64 aa3.83□□□□□ -1.8
NPLOC4-204ENST00000570324 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
NPLOC4-204ENST00000570324 R4GN34 69 aa3.81□□□□□ -1.8
NPLOC4-204ENST00000570324 KRTAP20-1Q3LI63 56 aa3.8□□□□□ -1.8
NPLOC4-204ENST00000570324 M0QZ58 72 aa3.77□□□□□ -1.81
NPLOC4-204ENST00000570324 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
NPLOC4-204ENST00000570324 P0C880 135 aa3.75□□□□□ -1.81
NPLOC4-204ENST00000570324 KRTAP25-1Q3LHN0 102 aa3.74□□□□□ -1.81
NPLOC4-204ENST00000570324 MUC12Q9UKN1 5478 aa3.73□□□□□ -1.81
NPLOC4-204ENST00000570324 MT1XP80297 61 aa3.73□□□□□ -1.81
NPLOC4-204ENST00000570324 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
NPLOC4-204ENST00000570324 NEBP20929 6669 aa3.72□□□□□ -1.81
NPLOC4-204ENST00000570324 KRTAP8-1Q8IUC2 63 aa3.71□□□□□ -1.82
NPLOC4-204ENST00000570324 SPRR2EP22531 72 aa3.7□□□□□ -1.82
NPLOC4-204ENST00000570324 SPRR2BP35325 72 aa3.7□□□□□ -1.82
NPLOC4-204ENST00000570324 SPRR2AP35326 72 aa3.7□□□□□ -1.82
NPLOC4-204ENST00000570324 KRTAP2-3P0C7H8 128 aa3.69□□□□□ -1.82
NPLOC4-204ENST00000570324 KRTAP2-4Q9BYR9 128 aa3.69□□□□□ -1.82
NPLOC4-204ENST00000570324 KRTAP12-2P59991 146 aa3.67□□□□□ -1.82
NPLOC4-204ENST00000570324 ROMO1P60602 79 aa3.67□□□□□ -1.82
NPLOC4-204ENST00000570324 KRTAP3-2Q9BYR7 98 aa3.67□□□□□ -1.82
NPLOC4-204ENST00000570324 KMT2DO14686 5537 aa3.66□□□□□ -1.82
NPLOC4-204ENST00000570324 KRTAP4-8A0A0G2JLE6 195 aa3.6□□□□□ -1.83
NPLOC4-204ENST00000570324 KRTAP4-8Q9BYQ9 185 aa3.6□□□□□ -1.83
NPLOC4-204ENST00000570324 LCE1AQ5T7P2 110 aa3.59□□□□□ -1.83
NPLOC4-204ENST00000570324 MDN1Q9NU22 5596 aa3.59□□□□□ -1.84
NPLOC4-204ENST00000570324 SPRR2DP22532 72 aa3.58□□□□□ -1.84
NPLOC4-204ENST00000570324 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
NPLOC4-204ENST00000570324 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
NPLOC4-204ENST00000570324 KRTAP2-1Q9BYU5 128 aa3.56□□□□□ -1.84
NPLOC4-204ENST00000570324 KRTAP10-12P60413 245 aa3.55□□□□□ -1.84
NPLOC4-204ENST00000570324 KRTAP13-4Q3LI77 160 aa3.52□□□□□ -1.85
NPLOC4-204ENST00000570324 CAMK2N1Q7Z7J9 78 aa3.52□□□□□ -1.85
NPLOC4-204ENST00000570324 KRTAP12-1P59990 96 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms