RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 RETNLBQ9BQ08 111 aa2.92□□□□□ -1.94
SF3B3-213ENST00000569687 IGKV2D-30A0A075B6S6 120 aa2.91□□□□□ -1.94
SF3B3-213ENST00000569687 C7orf65Q6ZTY9 151 aa2.91□□□□□ -1.94
SF3B3-213ENST00000569687 KRTAP4-5Q9BYR2 181 aa2.91□□□□□ -1.94
SF3B3-213ENST00000569687 A8MUN3 132 aa2.9□□□□□ -1.95
SF3B3-213ENST00000569687 Q5VV11 94 aa2.9□□□□□ -1.95
SF3B3-213ENST00000569687 PRO0628Q9UI54 55 aa2.9□□□□□ -1.95
SF3B3-213ENST00000569687 FLG2Q5D862 2391 aaPredicted RBP2.89□□□□□ -1.95
SF3B3-213ENST00000569687 C9orf92A6NGG3 77 aa2.89□□□□□ -1.95
SF3B3-213ENST00000569687 PSPHP1O15172 72 aa2.89□□□□□ -1.95
SF3B3-213ENST00000569687 MT1HL1P0DM35 61 aa2.89□□□□□ -1.95
SF3B3-213ENST00000569687 CHKB-CPT1BH3BT56 60 aa2.87□□□□□ -1.95
SF3B3-213ENST00000569687 PRR15LQ9BU68 103 aa2.87□□□□□ -1.95
SF3B3-213ENST00000569687 KRTAP9-3Q9BYQ3 159 aa2.87□□□□□ -1.95
SF3B3-213ENST00000569687 KRTAP4-8Q9BYQ9 185 aa2.87□□□□□ -1.95
SF3B3-213ENST00000569687 SPINK7P58062 85 aa2.86□□□□□ -1.95
SF3B3-213ENST00000569687 BRK1Q8WUW1 75 aa2.85□□□□□ -1.95
SF3B3-213ENST00000569687 RPL37P61927 97 aaKnown RBP2.84□□□□□ -1.95
SF3B3-213ENST00000569687 ATP11AUNQ6ZP68 121 aa2.84□□□□□ -1.95
SF3B3-213ENST00000569687 PCLOQ9Y6V0 5065 aa2.84□□□□□ -1.95
SF3B3-213ENST00000569687 LCE5AQ5TCM9 118 aa2.83□□□□□ -1.96
SF3B3-213ENST00000569687 DMBT1Q9UGM3 2413 aaPredicted RBP2.82□□□□□ -1.96
SF3B3-213ENST00000569687 COX6B2Q6YFQ2 88 aa2.82□□□□□ -1.96
SF3B3-213ENST00000569687 LCA10Q71F78 164 aa2.82□□□□□ -1.96
SF3B3-213ENST00000569687 SPTSSBQ8NFR3 76 aa2.82□□□□□ -1.96
SF3B3-213ENST00000569687 KRTAP9-2Q9BYQ4 174 aa2.82□□□□□ -1.96
SF3B3-213ENST00000569687 CDC42SE1Q9NRR8 79 aa2.81□□□□□ -1.96
SF3B3-213ENST00000569687 A0A1B0GU69 56 aa2.8□□□□□ -1.96
SF3B3-213ENST00000569687 A6NED7 52 aa2.8□□□□□ -1.96
SF3B3-213ENST00000569687 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.79□□□□□ -1.96
SF3B3-213ENST00000569687 TPRXLQ17RH7 258 aa2.79□□□□□ -1.96
SF3B3-213ENST00000569687 SPATA8Q6RVD6 105 aa2.79□□□□□ -1.96
SF3B3-213ENST00000569687 A8MU10 97 aa2.76□□□□□ -1.97
SF3B3-213ENST00000569687 UQCR11O14957 56 aa2.76□□□□□ -1.97
SF3B3-213ENST00000569687 LCE3BQ5TA77 95 aa2.76□□□□□ -1.97
SF3B3-213ENST00000569687 LPAP08519 4548 aa2.76□□□□□ -1.97
SF3B3-213ENST00000569687 HERC1Q15751 4861 aa2.75□□□□□ -1.97
SF3B3-213ENST00000569687 HMCN2Q8NDA2 5059 aa2.74□□□□□ -1.97
SF3B3-213ENST00000569687 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
SF3B3-213ENST00000569687 MUC17Q685J3 4493 aa2.74□□□□□ -1.97
SF3B3-213ENST00000569687 MIR22HGQ0VDD5 57 aa2.73□□□□□ -1.97
SF3B3-213ENST00000569687 PMAIP1Q13794 54 aa2.73□□□□□ -1.97
SF3B3-213ENST00000569687 A6NN06 94 aa2.72□□□□□ -1.97
SF3B3-213ENST00000569687 H1FX-AS1Q4G0G2 97 aa2.72□□□□□ -1.97
SF3B3-213ENST00000569687 LRP2P98164 4655 aa2.71□□□□□ -1.98
SF3B3-213ENST00000569687 A0A1B0GU33 70 aa2.7□□□□□ -1.98
SF3B3-213ENST00000569687 S4R3F8 94 aa2.69□□□□□ -1.98
SF3B3-213ENST00000569687 KRTAP10-6P60371 365 aaPredicted RBP2.68□□□□□ -1.98
SF3B3-213ENST00000569687 RBM12B-AS1Q9P1G2 102 aa2.68□□□□□ -1.98
SF3B3-213ENST00000569687 H0YAA0 97 aa2.66□□□□□ -1.98
SF3B3-213ENST00000569687 CSAG1Q6PB30 78 aa2.65□□□□□ -1.99
SF3B3-213ENST00000569687 KTN1-AS1Q86SY8 53 aa2.65□□□□□ -1.99
SF3B3-213ENST00000569687 RNF213Q63HN8 5207 aa2.61□□□□□ -1.99
SF3B3-213ENST00000569687 KRTAP19-2Q3LHN2 52 aa2.61□□□□□ -1.99
SF3B3-213ENST00000569687 KRTAP4-1Q9BYQ7 146 aa2.61□□□□□ -1.99
SF3B3-213ENST00000569687 UBR4Q5T4S7 5183 aa2.61□□□□□ -1.99
SF3B3-213ENST00000569687 MUC2Q02817 5179 aa2.6□□□□□ -1.99
SF3B3-213ENST00000569687 P0C880 135 aa2.6□□□□□ -1.99
SF3B3-213ENST00000569687 M0QZ58 72 aa2.59□□□□□ -1.99
SF3B3-213ENST00000569687 LCE1DQ5T752 114 aa2.59□□□□□ -1.99
SF3B3-213ENST00000569687 ADM2Q7Z4H4 148 aa2.59□□□□□ -1.99
SF3B3-213ENST00000569687 K7ERS5 55 aa2.58□□□□□ -2
SF3B3-213ENST00000569687 KRTAP13-4Q3LI77 160 aa2.58□□□□□ -2
SF3B3-213ENST00000569687 LCE1AQ5T7P2 110 aa2.58□□□□□ -2
SF3B3-213ENST00000569687 FLGP20930 4061 aaPredicted RBP2.56□□□□□ -2
SF3B3-213ENST00000569687 KRTAP4-8A0A0G2JLE6 195 aa2.55□□□□□ -2
SF3B3-213ENST00000569687 CAMK2N1Q7Z7J9 78 aa2.55□□□□□ -2
SF3B3-213ENST00000569687 A0A0D9SG42 100 aa2.51□□□□□ -2.01
SF3B3-213ENST00000569687 KRTAP12-1P59990 96 aa2.51□□□□□ -2.01
SF3B3-213ENST00000569687 ROMO1P60602 79 aa2.51□□□□□ -2.01
SF3B3-213ENST00000569687 KRTAP12-2P59991 146 aa2.49□□□□□ -2.01
SF3B3-213ENST00000569687 CRIPTQ9P021 101 aa2.48□□□□□ -2.01
SF3B3-213ENST00000569687 R4GN34 69 aa2.48□□□□□ -2.01
SF3B3-213ENST00000569687 FAT4Q6V0I7 4981 aa2.48□□□□□ -2.01
SF3B3-213ENST00000569687 MT3P25713 68 aa2.47□□□□□ -2.01
SF3B3-213ENST00000569687 KRTAP25-1Q3LHN0 102 aa2.47□□□□□ -2.01
SF3B3-213ENST00000569687 KRTAP4-9Q9BYQ8 210 aa2.47□□□□□ -2.01
SF3B3-213ENST00000569687 SPINT4Q6UDR6 99 aa2.46□□□□□ -2.02
SF3B3-213ENST00000569687 KRTAP4-11Q9BYQ6 195 aa2.45□□□□□ -2.02
SF3B3-213ENST00000569687 LINC01554Q52M75 96 aa2.44□□□□□ -2.02
SF3B3-213ENST00000569687 MT1HP80294 61 aa2.43□□□□□ -2.02
SF3B3-213ENST00000569687 KRTAP4-7Q9BYR0 210 aa2.43□□□□□ -2.02
SF3B3-213ENST00000569687 M0R2T5 61 aa2.39□□□□□ -2.03
SF3B3-213ENST00000569687 SPRR2GQ9BYE4 73 aa2.38□□□□□ -2.03
SF3B3-213ENST00000569687 C10orf95Q9H7T3 257 aa2.38□□□□□ -2.03
SF3B3-213ENST00000569687 LUZP6Q538Z0 58 aa2.37□□□□□ -2.03
SF3B3-213ENST00000569687 KRTAP9-8Q9BYQ0 159 aa2.36□□□□□ -2.03
SF3B3-213ENST00000569687 MT2AP02795 61 aa2.34□□□□□ -2.03
SF3B3-213ENST00000569687 LCE1FQ5T754 118 aa2.34□□□□□ -2.03
SF3B3-213ENST00000569687 MT1FP04733 61 aa2.32□□□□□ -2.04
SF3B3-213ENST00000569687 KRTAP4-2Q9BYR5 136 aa2.32□□□□□ -2.04
SF3B3-213ENST00000569687 KRTAP2-2Q9BYT5 123 aa2.32□□□□□ -2.04
SF3B3-213ENST00000569687 KRTAP10-10P60014 251 aa2.31□□□□□ -2.04
SF3B3-213ENST00000569687 KRTAP19-8Q3LI54 63 aa2.31□□□□□ -2.04
SF3B3-213ENST00000569687 PP632Q6XCG6 107 aa2.3□□□□□ -2.04
SF3B3-213ENST00000569687 PLAC4Q8WY50 150 aa2.3□□□□□ -2.04
SF3B3-213ENST00000569687 TNP1P09430 55 aa2.27□□□□□ -2.05
SF3B3-213ENST00000569687 MT1BP07438 61 aa2.24□□□□□ -2.05
SF3B3-213ENST00000569687 USH2AO75445 5202 aa2.2□□□□□ -2.06
SF3B3-213ENST00000569687 KRTAP10-5P60370 271 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms