RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 LCE3BQ5TA77 95 aa6.31□□□□□ -1.4
CNOT1-217ENST00000569263 KRTAP9-9Q9BYP9 154 aa6.31□□□□□ -1.4
CNOT1-217ENST00000569263 KRTAP9-4Q9BYQ2 154 aa6.31□□□□□ -1.4
CNOT1-217ENST00000569263 KRTAP9-8Q9BYQ0 159 aa6.27□□□□□ -1.41
CNOT1-217ENST00000569263 A8MUN3 132 aa6.26□□□□□ -1.41
CNOT1-217ENST00000569263 SERP2Q8N6R1 65 aa6.26□□□□□ -1.41
CNOT1-217ENST00000569263 LCA10Q71F78 164 aa6.25□□□□□ -1.41
CNOT1-217ENST00000569263 MT2AP02795 61 aa6.24□□□□□ -1.41
CNOT1-217ENST00000569263 CSAG1Q6PB30 78 aa6.22□□□□□ -1.41
CNOT1-217ENST00000569263 SNURFQ9Y675 71 aa6.22□□□□□ -1.41
CNOT1-217ENST00000569263 C20orf197Q8N268 126 aa6.21□□□□□ -1.42
CNOT1-217ENST00000569263 KRTAP10-10P60014 251 aa6.19□□□□□ -1.42
CNOT1-217ENST00000569263 MT1FP04733 61 aa6.18□□□□□ -1.42
CNOT1-217ENST00000569263 DMAC1Q96GE9 116 aa6.17□□□□□ -1.42
CNOT1-217ENST00000569263 NDUFC1O43677 76 aa6.16□□□□□ -1.42
CNOT1-217ENST00000569263 COX7CP15954 63 aa6.15□□□□□ -1.42
CNOT1-217ENST00000569263 KRTAP4-12Q9BQ66 201 aa6.14□□□□□ -1.43
CNOT1-217ENST00000569263 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
CNOT1-217ENST00000569263 ANAPC13Q9BS18 74 aa6.11□□□□□ -1.43
CNOT1-217ENST00000569263 ACYP2P14621 99 aa6.1□□□□□ -1.43
CNOT1-217ENST00000569263 SPANXA2-OT1Q8N9U9 137 aa6.08□□□□□ -1.44
CNOT1-217ENST00000569263 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
CNOT1-217ENST00000569263 CHKB-CPT1BH3BT56 60 aa6.03□□□□□ -1.44
CNOT1-217ENST00000569263 H0YAA0 97 aa6□□□□□ -1.45
CNOT1-217ENST00000569263 SPTSSBQ8NFR3 76 aa5.99□□□□□ -1.45
CNOT1-217ENST00000569263 H7BZZ5 65 aa5.98□□□□□ -1.45
CNOT1-217ENST00000569263 CYSTM1Q9H1C7 97 aa5.97□□□□□ -1.45
CNOT1-217ENST00000569263 ADM2Q7Z4H4 148 aa5.96□□□□□ -1.46
CNOT1-217ENST00000569263 CCDC179H3BU77 68 aa5.95□□□□□ -1.46
CNOT1-217ENST00000569263 CRCT1Q9UGL9 99 aa5.95□□□□□ -1.46
CNOT1-217ENST00000569263 KRTAP4-2Q9BYR5 136 aa5.93□□□□□ -1.46
CNOT1-217ENST00000569263 CRIPTQ9P021 101 aa5.92□□□□□ -1.46
CNOT1-217ENST00000569263 COA5Q86WW8 74 aa5.91□□□□□ -1.46
CNOT1-217ENST00000569263 USH2AO75445 5202 aa5.91□□□□□ -1.46
CNOT1-217ENST00000569263 LCE1DQ5T752 114 aa5.9□□□□□ -1.46
CNOT1-217ENST00000569263 KRTAP19-1Q8IUB9 90 aa5.89□□□□□ -1.47
CNOT1-217ENST00000569263 SPRR2GQ9BYE4 73 aa5.88□□□□□ -1.47
CNOT1-217ENST00000569263 FSIP2Q5CZC0 6907 aa5.86□□□□□ -1.47
CNOT1-217ENST00000569263 P0C880 135 aa5.85□□□□□ -1.47
CNOT1-217ENST00000569263 KRTAP4-9Q9BYQ8 210 aa5.84□□□□□ -1.47
CNOT1-217ENST00000569263 ATP5EP56381 51 aaPredicted RBP5.82□□□□□ -1.48
CNOT1-217ENST00000569263 Q5VV11 94 aa5.81□□□□□ -1.48
CNOT1-217ENST00000569263 KRTAP5-3Q6L8H2 238 aa5.81□□□□□ -1.48
CNOT1-217ENST00000569263 R4GN34 69 aa5.81□□□□□ -1.48
CNOT1-217ENST00000569263 SSPOA2VEC9 5147 aa5.79□□□□□ -1.48
CNOT1-217ENST00000569263 KRTAP19-8Q3LI54 63 aa5.79□□□□□ -1.48
CNOT1-217ENST00000569263 M0QZ58 72 aa5.78□□□□□ -1.48
CNOT1-217ENST00000569263 TMEM258P61165 79 aa5.77□□□□□ -1.49
CNOT1-217ENST00000569263 MT1BP07438 61 aa5.75□□□□□ -1.49
CNOT1-217ENST00000569263 SEC61GP60059 68 aa5.73□□□□□ -1.49
CNOT1-217ENST00000569263 KRTAP19-6Q3LI70 58 aa5.73□□□□□ -1.49
CNOT1-217ENST00000569263 SERP1Q9Y6X1 66 aa5.7□□□□□ -1.5
CNOT1-217ENST00000569263 LINC01554Q52M75 96 aa5.69□□□□□ -1.5
CNOT1-217ENST00000569263 PLAC4Q8WY50 150 aa5.64□□□□□ -1.51
CNOT1-217ENST00000569263 A0A1B0GU69 56 aa5.62□□□□□ -1.51
CNOT1-217ENST00000569263 A6NN06 94 aa5.61□□□□□ -1.51
CNOT1-217ENST00000569263 FCGBPQ9Y6R7 5405 aaPredicted RBP5.61□□□□□ -1.51
CNOT1-217ENST00000569263 PCP4P48539 62 aa5.59□□□□□ -1.51
CNOT1-217ENST00000569263 KRTAP10-5P60370 271 aa5.57□□□□□ -1.52
CNOT1-217ENST00000569263 KRTAP13-4Q3LI77 160 aa5.57□□□□□ -1.52
CNOT1-217ENST00000569263 A0A1B0GU33 70 aa5.56□□□□□ -1.52
CNOT1-217ENST00000569263 PRR15LQ9BU68 103 aa5.55□□□□□ -1.52
CNOT1-217ENST00000569263 KRTAP4-11Q9BYQ6 195 aa5.52□□□□□ -1.53
CNOT1-217ENST00000569263 PRO2289Q9P1D8 64 aa5.52□□□□□ -1.53
CNOT1-217ENST00000569263 SPATA8Q6RVD6 105 aa5.51□□□□□ -1.53
CNOT1-217ENST00000569263 LINC01558Q9Y6Z2 57 aa5.51□□□□□ -1.53
CNOT1-217ENST00000569263 A0A0D9SG42 100 aa5.48□□□□□ -1.53
CNOT1-217ENST00000569263 MT1XP80297 61 aa5.46□□□□□ -1.54
CNOT1-217ENST00000569263 SMIM26A0A096LP01 95 aa5.43□□□□□ -1.54
CNOT1-217ENST00000569263 V9GYY9 64 aa5.41□□□□□ -1.54
CNOT1-217ENST00000569263 CAMK2N1Q7Z7J9 78 aa5.4□□□□□ -1.54
CNOT1-217ENST00000569263 SPINT4Q6UDR6 99 aa5.39□□□□□ -1.55
CNOT1-217ENST00000569263 KRTAP9-7A8MTY7 169 aa5.38□□□□□ -1.55
CNOT1-217ENST00000569263 A8MU10 97 aa5.36□□□□□ -1.55
CNOT1-217ENST00000569263 UQCR11O14957 56 aa5.35□□□□□ -1.55
CNOT1-217ENST00000569263 Q1T7F1 81 aa5.35□□□□□ -1.55
CNOT1-217ENST00000569263 KRTAP12-1P59990 96 aa5.34□□□□□ -1.55
CNOT1-217ENST00000569263 PSPHP1O15172 72 aa5.32□□□□□ -1.56
CNOT1-217ENST00000569263 RPS28P62857 69 aaKnown RBP5.32□□□□□ -1.56
CNOT1-217ENST00000569263 KRTAP12-2P59991 146 aa5.31□□□□□ -1.56
CNOT1-217ENST00000569263 MACF1Q9UPN3 7388 aaKnown RBP5.31□□□□□ -1.56
CNOT1-217ENST00000569263 MIR22HGQ0VDD5 57 aa5.26□□□□□ -1.57
CNOT1-217ENST00000569263 KRTAP6-3Q3LI67 103 aa5.25□□□□□ -1.57
CNOT1-217ENST00000569263 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
CNOT1-217ENST00000569263 KRTAP10-12P60413 245 aa5.19□□□□□ -1.58
CNOT1-217ENST00000569263 SYNE2Q8WXH0 6885 aaKnown RBP5.19□□□□□ -1.58
CNOT1-217ENST00000569263 A6NED7 52 aa5.18□□□□□ -1.58
CNOT1-217ENST00000569263 KRTAP8-1Q8IUC2 63 aa5.16□□□□□ -1.58
CNOT1-217ENST00000569263 K7ERS5 55 aa5.14□□□□□ -1.59
CNOT1-217ENST00000569263 KRTAP5-9P26371 169 aa5.13□□□□□ -1.59
CNOT1-217ENST00000569263 KMT2DO14686 5537 aa5.11□□□□□ -1.59
CNOT1-217ENST00000569263 SPRR2FQ96RM1 72 aa5.09□□□□□ -1.59
CNOT1-217ENST00000569263 C10orf95Q9H7T3 257 aa5.07□□□□□ -1.6
CNOT1-217ENST00000569263 TNP1P09430 55 aa5.04□□□□□ -1.6
CNOT1-217ENST00000569263 CDC42SE1Q9NRR8 79 aa4.99□□□□□ -1.61
CNOT1-217ENST00000569263 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
CNOT1-217ENST00000569263 MUC12Q9UKN1 5478 aa4.97□□□□□ -1.61
CNOT1-217ENST00000569263 SPRR2EP22531 72 aa4.95□□□□□ -1.62
CNOT1-217ENST00000569263 SPRR2BP35325 72 aa4.95□□□□□ -1.62
CNOT1-217ENST00000569263 SPRR2AP35326 72 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms