RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 C4orf26Q17RF5 130 aa8.74□□□□□ -1.01
RAB40C-210ENST00000566290 MPLKIPQ8TAP9 179 aa8.74□□□□□ -1.01
RAB40C-210ENST00000566290 LINC01558Q9Y6Z2 57 aa8.74□□□□□ -1.01
RAB40C-210ENST00000566290 CHKB-CPT1BH3BT56 60 aa8.73□□□□□ -1.01
RAB40C-210ENST00000566290 COX6B2Q6YFQ2 88 aa8.73□□□□□ -1.01
RAB40C-210ENST00000566290 KRTAP4-1Q9BYQ7 146 aa8.67□□□□□ -1.02
RAB40C-210ENST00000566290 KRTAP3-1Q9BYR8 98 aa8.66□□□□□ -1.02
RAB40C-210ENST00000566290 SPTSSBQ8NFR3 76 aa8.65□□□□□ -1.02
RAB40C-210ENST00000566290 KRTAP9-7A8MTY7 169 aa8.62□□□□□ -1.03
RAB40C-210ENST00000566290 SEC61BP60468 96 aaKnown RBP8.6□□□□□ -1.03
RAB40C-210ENST00000566290 Q5VV11 94 aa8.59□□□□□ -1.03
RAB40C-210ENST00000566290 PRR15LQ9BU68 103 aa8.57□□□□□ -1.04
RAB40C-210ENST00000566290 PSPHP1O15172 72 aa8.55□□□□□ -1.04
RAB40C-210ENST00000566290 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.52□□□□□ -1.05
RAB40C-210ENST00000566290 A0A1B0GU69 56 aa8.46□□□□□ -1.06
RAB40C-210ENST00000566290 RBM12B-AS1Q9P1G2 102 aa8.46□□□□□ -1.06
RAB40C-210ENST00000566290 LCE2CQ5TA81 110 aa8.45□□□□□ -1.06
RAB40C-210ENST00000566290 H1FX-AS1Q4G0G2 97 aa8.44□□□□□ -1.06
RAB40C-210ENST00000566290 PRO0628Q9UI54 55 aa8.42□□□□□ -1.06
RAB40C-210ENST00000566290 KRTAP19-2Q3LHN2 52 aa8.41□□□□□ -1.06
RAB40C-210ENST00000566290 S4R3F8 94 aa8.39□□□□□ -1.07
RAB40C-210ENST00000566290 SEC61GP60059 68 aa8.38□□□□□ -1.07
RAB40C-210ENST00000566290 MT1HP80294 61 aa8.37□□□□□ -1.07
RAB40C-210ENST00000566290 BRK1Q8WUW1 75 aa8.37□□□□□ -1.07
RAB40C-210ENST00000566290 KRTAP3-3Q9BYR6 98 aa8.37□□□□□ -1.07
RAB40C-210ENST00000566290 LORP23490 312 aaPredicted RBP8.36□□□□□ -1.07
RAB40C-210ENST00000566290 A6NED7 52 aa8.35□□□□□ -1.07
RAB40C-210ENST00000566290 LCA10Q71F78 164 aa8.35□□□□□ -1.07
RAB40C-210ENST00000566290 CDC42SE1Q9NRR8 79 aa8.34□□□□□ -1.07
RAB40C-210ENST00000566290 KRTAP10-6P60371 365 aaPredicted RBP8.31□□□□□ -1.08
RAB40C-210ENST00000566290 UQCR11O14957 56 aa8.3□□□□□ -1.08
RAB40C-210ENST00000566290 SSPOA2VEC9 5147 aa8.28□□□□□ -1.08
RAB40C-210ENST00000566290 SPATA8Q6RVD6 105 aa8.25□□□□□ -1.09
RAB40C-210ENST00000566290 USH2AO75445 5202 aa8.22□□□□□ -1.09
RAB40C-210ENST00000566290 H0YAA0 97 aa8.2□□□□□ -1.1
RAB40C-210ENST00000566290 CSAG1Q6PB30 78 aa8.2□□□□□ -1.1
RAB40C-210ENST00000566290 SVIPQ8NHG7 77 aa8.19□□□□□ -1.1
RAB40C-210ENST00000566290 MIR22HGQ0VDD5 57 aa8.17□□□□□ -1.1
RAB40C-210ENST00000566290 A0A1B0GU33 70 aa8.15□□□□□ -1.1
RAB40C-210ENST00000566290 FLGP20930 4061 aaPredicted RBP8.14□□□□□ -1.11
RAB40C-210ENST00000566290 KRTAP3-2Q9BYR7 98 aa8.13□□□□□ -1.11
RAB40C-210ENST00000566290 FCGBPQ9Y6R7 5405 aaPredicted RBP8.13□□□□□ -1.11
RAB40C-210ENST00000566290 SYNE2Q8WXH0 6885 aaKnown RBP8.12□□□□□ -1.11
RAB40C-210ENST00000566290 A8MU10 97 aa8.11□□□□□ -1.11
RAB40C-210ENST00000566290 M0R2T5 61 aa8.11□□□□□ -1.11
RAB40C-210ENST00000566290 MACF1Q9UPN3 7388 aaKnown RBP8□□□□□ -1.13
RAB40C-210ENST00000566290 ADM2Q7Z4H4 148 aa7.98□□□□□ -1.13
RAB40C-210ENST00000566290 P0C880 135 aa7.97□□□□□ -1.13
RAB40C-210ENST00000566290 A6NN06 94 aa7.96□□□□□ -1.14
RAB40C-210ENST00000566290 M0QZ58 72 aa7.94□□□□□ -1.14
RAB40C-210ENST00000566290 PMAIP1Q13794 54 aa7.94□□□□□ -1.14
RAB40C-210ENST00000566290 KRTAP19-1Q8IUB9 90 aa7.92□□□□□ -1.14
RAB40C-210ENST00000566290 KRTAP13-4Q3LI77 160 aa7.87□□□□□ -1.15
RAB40C-210ENST00000566290 KRTAP9-8Q9BYQ0 159 aa7.84□□□□□ -1.15
RAB40C-210ENST00000566290 K7ERS5 55 aa7.81□□□□□ -1.16
RAB40C-210ENST00000566290 CRIPTQ9P021 101 aa7.77□□□□□ -1.17
RAB40C-210ENST00000566290 KTN1-AS1Q86SY8 53 aa7.76□□□□□ -1.17
RAB40C-210ENST00000566290 LCE2BO14633 110 aa7.75□□□□□ -1.17
RAB40C-210ENST00000566290 MT2AP02795 61 aa7.73□□□□□ -1.17
RAB40C-210ENST00000566290 R4GN34 69 aa7.73□□□□□ -1.17
RAB40C-210ENST00000566290 MT1FP04733 61 aa7.69□□□□□ -1.18
RAB40C-210ENST00000566290 KRTAP6-3Q3LI67 103 aa7.69□□□□□ -1.18
RAB40C-210ENST00000566290 NEBP20929 6669 aa7.68□□□□□ -1.18
RAB40C-210ENST00000566290 KRTAP12-1P59990 96 aa7.65□□□□□ -1.18
RAB40C-210ENST00000566290 A0A0D9SG42 100 aa7.64□□□□□ -1.19
RAB40C-210ENST00000566290 KRTAP9-3Q9BYQ3 159 aa7.6□□□□□ -1.19
RAB40C-210ENST00000566290 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
RAB40C-210ENST00000566290 KRTAP10-10P60014 251 aa7.58□□□□□ -1.2
RAB40C-210ENST00000566290 KRTAP19-6Q3LI70 58 aa7.55□□□□□ -1.2
RAB40C-210ENST00000566290 ROMO1P60602 79 aa7.5□□□□□ -1.21
RAB40C-210ENST00000566290 SPRR2GQ9BYE4 73 aa7.5□□□□□ -1.21
RAB40C-210ENST00000566290 KRTAP20-1Q3LI63 56 aa7.48□□□□□ -1.21
RAB40C-210ENST00000566290 SPINT4Q6UDR6 99 aa7.48□□□□□ -1.21
RAB40C-210ENST00000566290 MUC12Q9UKN1 5478 aa7.47□□□□□ -1.21
RAB40C-210ENST00000566290 LINC01554Q52M75 96 aa7.44□□□□□ -1.22
RAB40C-210ENST00000566290 PRAC1Q96KF2 57 aa7.33□□□□□ -1.24
RAB40C-210ENST00000566290 KRTAP19-8Q3LI54 63 aa7.29□□□□□ -1.24
RAB40C-210ENST00000566290 KRTAP25-1Q3LHN0 102 aa7.27□□□□□ -1.25
RAB40C-210ENST00000566290 CAMK2N1Q7Z7J9 78 aa7.23□□□□□ -1.25
RAB40C-210ENST00000566290 PLAC4Q8WY50 150 aa7.19□□□□□ -1.26
RAB40C-210ENST00000566290 C10orf95Q9H7T3 257 aa7.19□□□□□ -1.26
RAB40C-210ENST00000566290 KMT2DO14686 5537 aa7.12□□□□□ -1.27
RAB40C-210ENST00000566290 MDN1Q9NU22 5596 aa7.11□□□□□ -1.27
RAB40C-210ENST00000566290 MT1BP07438 61 aa7.09□□□□□ -1.27
RAB40C-210ENST00000566290 KRTAP2-3P0C7H8 128 aa7.08□□□□□ -1.28
RAB40C-210ENST00000566290 KRTAP2-4Q9BYR9 128 aa7.08□□□□□ -1.28
RAB40C-210ENST00000566290 KRTAP23-1A1A580 65 aa7.03□□□□□ -1.28
RAB40C-210ENST00000566290 KRTAP5-9P26371 169 aa7.01□□□□□ -1.29
RAB40C-210ENST00000566290 PP632Q6XCG6 107 aa7.01□□□□□ -1.29
RAB40C-210ENST00000566290 TNP1P09430 55 aa6.98□□□□□ -1.29
RAB40C-210ENST00000566290 MT1XP80297 61 aa6.89□□□□□ -1.31
RAB40C-210ENST00000566290 KRTAP10-5P60370 271 aa6.88□□□□□ -1.31
RAB40C-210ENST00000566290 PRO2289Q9P1D8 64 aa6.86□□□□□ -1.31
RAB40C-210ENST00000566290 KRTAP2-2Q9BYT5 123 aa6.81□□□□□ -1.32
RAB40C-210ENST00000566290 KRTAP2-1Q9BYU5 128 aa6.81□□□□□ -1.32
RAB40C-210ENST00000566290 GPR98Q8WXG9 6306 aa6.79□□□□□ -1.32
RAB40C-210ENST00000566290 SPRR2EP22531 72 aa6.72□□□□□ -1.33
RAB40C-210ENST00000566290 SPRR2BP35325 72 aa6.72□□□□□ -1.33
RAB40C-210ENST00000566290 SPRR2AP35326 72 aa6.72□□□□□ -1.33
RAB40C-210ENST00000566290 SPRR2FQ96RM1 72 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms