RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 HRES1P13985 223 aa6.77□□□□□ -1.33
SF3B3-206ENST00000565990 RPL37P61927 97 aaKnown RBP6.77□□□□□ -1.33
SF3B3-206ENST00000565990 A8MUU9 505 aa6.76□□□□□ -1.33
SF3B3-206ENST00000565990 SEC61BP60468 96 aaKnown RBP6.76□□□□□ -1.33
SF3B3-206ENST00000565990 CHKB-CPT1BH3BT56 60 aa6.75□□□□□ -1.33
SF3B3-206ENST00000565990 Q5W150 140 aa6.75□□□□□ -1.33
SF3B3-206ENST00000565990 DMAC1Q96GE9 116 aa6.75□□□□□ -1.33
SF3B3-206ENST00000565990 IGKV2-30P06310 120 aa6.74□□□□□ -1.33
SF3B3-206ENST00000565990 MUC2Q02817 5179 aa6.74□□□□□ -1.33
SF3B3-206ENST00000565990 ATP11AUNQ6ZP68 121 aa6.72□□□□□ -1.33
SF3B3-206ENST00000565990 CDC42SE1Q9NRR8 79 aa6.72□□□□□ -1.33
SF3B3-206ENST00000565990 A6NED7 52 aa6.68□□□□□ -1.34
SF3B3-206ENST00000565990 KRTAP4-1Q9BYQ7 146 aa6.67□□□□□ -1.34
SF3B3-206ENST00000565990 PMAIP1Q13794 54 aa6.66□□□□□ -1.34
SF3B3-206ENST00000565990 LCA10Q71F78 164 aa6.61□□□□□ -1.35
SF3B3-206ENST00000565990 IGKV2D-30A0A075B6S6 120 aa6.59□□□□□ -1.35
SF3B3-206ENST00000565990 C7orf65Q6ZTY9 151 aa6.57□□□□□ -1.36
SF3B3-206ENST00000565990 KRTAP4-8Q9BYQ9 185 aa6.57□□□□□ -1.36
SF3B3-206ENST00000565990 KTN1-AS1Q86SY8 53 aa6.55□□□□□ -1.36
SF3B3-206ENST00000565990 A0A1B0GU69 56 aa6.53□□□□□ -1.36
SF3B3-206ENST00000565990 A6NN06 94 aa6.53□□□□□ -1.36
SF3B3-206ENST00000565990 SPTSSBQ8NFR3 76 aa6.53□□□□□ -1.36
SF3B3-206ENST00000565990 SPINK7P58062 85 aa6.51□□□□□ -1.37
SF3B3-206ENST00000565990 KRTAP19-2Q3LHN2 52 aa6.51□□□□□ -1.37
SF3B3-206ENST00000565990 FAT4Q6V0I7 4981 aa6.51□□□□□ -1.37
SF3B3-206ENST00000565990 SPATA8Q6RVD6 105 aa6.49□□□□□ -1.37
SF3B3-206ENST00000565990 A8MU10 97 aa6.48□□□□□ -1.37
SF3B3-206ENST00000565990 UQCR11O14957 56 aa6.47□□□□□ -1.37
SF3B3-206ENST00000565990 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.46□□□□□ -1.38
SF3B3-206ENST00000565990 KRTAP9-2Q9BYQ4 174 aa6.45□□□□□ -1.38
SF3B3-206ENST00000565990 KRTAP9-6A0A140TA67 174 aa6.41□□□□□ -1.38
SF3B3-206ENST00000565990 SEC61GP60059 68 aa6.41□□□□□ -1.38
SF3B3-206ENST00000565990 MIR22HGQ0VDD5 57 aa6.39□□□□□ -1.39
SF3B3-206ENST00000565990 RBM12B-AS1Q9P1G2 102 aa6.35□□□□□ -1.39
SF3B3-206ENST00000565990 COX6B2Q6YFQ2 88 aa6.32□□□□□ -1.4
SF3B3-206ENST00000565990 MT1HP80294 61 aa6.31□□□□□ -1.4
SF3B3-206ENST00000565990 FLGP20930 4061 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-206ENST00000565990 KRTAP3-1Q9BYR8 98 aa6.23□□□□□ -1.41
SF3B3-206ENST00000565990 H1FX-AS1Q4G0G2 97 aa6.21□□□□□ -1.42
SF3B3-206ENST00000565990 LCE3BQ5TA77 95 aa6.2□□□□□ -1.42
SF3B3-206ENST00000565990 A0A1B0GU33 70 aa6.18□□□□□ -1.42
SF3B3-206ENST00000565990 KRTAP4-12Q9BQ66 201 aa6.17□□□□□ -1.42
SF3B3-206ENST00000565990 M0R2T5 61 aa6.15□□□□□ -1.42
SF3B3-206ENST00000565990 KRTAP10-6P60371 365 aaPredicted RBP6.14□□□□□ -1.43
SF3B3-206ENST00000565990 H0YAA0 97 aa6.13□□□□□ -1.43
SF3B3-206ENST00000565990 KRTAP9-9Q9BYP9 154 aa6.13□□□□□ -1.43
SF3B3-206ENST00000565990 KRTAP9-4Q9BYQ2 154 aa6.13□□□□□ -1.43
SF3B3-206ENST00000565990 K7ERS5 55 aa6.1□□□□□ -1.43
SF3B3-206ENST00000565990 KRTAP4-8A0A0G2JLE6 195 aa6.07□□□□□ -1.44
SF3B3-206ENST00000565990 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
SF3B3-206ENST00000565990 S4R3F8 94 aa6.04□□□□□ -1.44
SF3B3-206ENST00000565990 LINC01554Q52M75 96 aa6.03□□□□□ -1.44
SF3B3-206ENST00000565990 PRAC1Q96KF2 57 aa6.02□□□□□ -1.45
SF3B3-206ENST00000565990 ADM2Q7Z4H4 148 aa5.99□□□□□ -1.45
SF3B3-206ENST00000565990 MT2AP02795 61 aa5.98□□□□□ -1.45
SF3B3-206ENST00000565990 CSAG1Q6PB30 78 aa5.98□□□□□ -1.45
SF3B3-206ENST00000565990 KRTAP19-1Q8IUB9 90 aa5.97□□□□□ -1.45
SF3B3-206ENST00000565990 MT1FP04733 61 aa5.93□□□□□ -1.46
SF3B3-206ENST00000565990 KRTAP25-1Q3LHN0 102 aa5.91□□□□□ -1.46
SF3B3-206ENST00000565990 KRTAP10-10P60014 251 aa5.89□□□□□ -1.47
SF3B3-206ENST00000565990 KRTAP4-7Q9BYR0 210 aa5.89□□□□□ -1.47
SF3B3-206ENST00000565990 ROMO1P60602 79 aa5.87□□□□□ -1.47
SF3B3-206ENST00000565990 KRTAP9-3Q9BYQ3 159 aa5.86□□□□□ -1.47
SF3B3-206ENST00000565990 M0QZ58 72 aa5.83□□□□□ -1.48
SF3B3-206ENST00000565990 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
SF3B3-206ENST00000565990 FSIP2Q5CZC0 6907 aa5.8□□□□□ -1.48
SF3B3-206ENST00000565990 KRTAP13-4Q3LI77 160 aa5.79□□□□□ -1.48
SF3B3-206ENST00000565990 P0C880 135 aa5.76□□□□□ -1.49
SF3B3-206ENST00000565990 USH2AO75445 5202 aa5.75□□□□□ -1.49
SF3B3-206ENST00000565990 CRIPTQ9P021 101 aa5.72□□□□□ -1.49
SF3B3-206ENST00000565990 A0A0D9SG42 100 aa5.7□□□□□ -1.5
SF3B3-206ENST00000565990 SPRR2GQ9BYE4 73 aa5.7□□□□□ -1.5
SF3B3-206ENST00000565990 KRTAP4-9Q9BYQ8 210 aa5.69□□□□□ -1.5
SF3B3-206ENST00000565990 KRTAP12-1P59990 96 aa5.67□□□□□ -1.5
SF3B3-206ENST00000565990 KRTAP4-2Q9BYR5 136 aa5.65□□□□□ -1.5
SF3B3-206ENST00000565990 SSPOA2VEC9 5147 aa5.63□□□□□ -1.51
SF3B3-206ENST00000565990 KRTAP12-2P59991 146 aa5.62□□□□□ -1.51
SF3B3-206ENST00000565990 KRTAP19-8Q3LI54 63 aa5.61□□□□□ -1.51
SF3B3-206ENST00000565990 CRCT1Q9UGL9 99 aa5.6□□□□□ -1.51
SF3B3-206ENST00000565990 SPINT4Q6UDR6 99 aa5.57□□□□□ -1.52
SF3B3-206ENST00000565990 MT1BP07438 61 aa5.55□□□□□ -1.52
SF3B3-206ENST00000565990 R4GN34 69 aa5.55□□□□□ -1.52
SF3B3-206ENST00000565990 KRTAP19-6Q3LI70 58 aa5.49□□□□□ -1.53
SF3B3-206ENST00000565990 KRTAP4-11Q9BYQ6 195 aa5.44□□□□□ -1.54
SF3B3-206ENST00000565990 FCGBPQ9Y6R7 5405 aaPredicted RBP5.41□□□□□ -1.54
SF3B3-206ENST00000565990 C10orf95Q9H7T3 257 aa5.41□□□□□ -1.54
SF3B3-206ENST00000565990 PP632Q6XCG6 107 aa5.37□□□□□ -1.55
SF3B3-206ENST00000565990 PLAC4Q8WY50 150 aa5.37□□□□□ -1.55
SF3B3-206ENST00000565990 KRTAP15-1Q3LI76 137 aa5.36□□□□□ -1.55
SF3B3-206ENST00000565990 KRTAP10-5P60370 271 aa5.35□□□□□ -1.55
SF3B3-206ENST00000565990 H3BS24 57 aa5.3□□□□□ -1.56
SF3B3-206ENST00000565990 LCE4AQ5TA78 99 aa5.3□□□□□ -1.56
SF3B3-206ENST00000565990 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
SF3B3-206ENST00000565990 MT1XP80297 61 aa5.28□□□□□ -1.56
SF3B3-206ENST00000565990 CAMK2N1Q7Z7J9 78 aa5.24□□□□□ -1.57
SF3B3-206ENST00000565990 PRO2289Q9P1D8 64 aa5.24□□□□□ -1.57
SF3B3-206ENST00000565990 KRTAP5-3Q6L8H2 238 aa5.23□□□□□ -1.57
SF3B3-206ENST00000565990 MACF1Q9UPN3 7388 aaKnown RBP5.21□□□□□ -1.58
SF3B3-206ENST00000565990 LCE5AQ5TCM9 118 aa5.17□□□□□ -1.58
SF3B3-206ENST00000565990 SYNE2Q8WXH0 6885 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 272.4 ms