RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 KRTAP3-1Q9BYR8 98 aa9.65□□□□□ -0.86
CSPG4P13-201ENST00000565545 LCE2CQ5TA81 110 aa9.61□□□□□ -0.87
CSPG4P13-201ENST00000565545 SERP1Q9Y6X1 66 aa9.61□□□□□ -0.87
CSPG4P13-201ENST00000565545 H1FX-AS1Q4G0G2 97 aa9.57□□□□□ -0.88
CSPG4P13-201ENST00000565545 COA5Q86WW8 74 aa9.57□□□□□ -0.88
CSPG4P13-201ENST00000565545 RPS28P62857 69 aaKnown RBP9.55□□□□□ -0.88
CSPG4P13-201ENST00000565545 MT1HP80294 61 aa9.55□□□□□ -0.88
CSPG4P13-201ENST00000565545 CHKB-CPT1BH3BT56 60 aa9.52□□□□□ -0.89
CSPG4P13-201ENST00000565545 KRTAP19-2Q3LHN2 52 aa9.51□□□□□ -0.89
CSPG4P13-201ENST00000565545 S4R3F8 94 aa9.45□□□□□ -0.9
CSPG4P13-201ENST00000565545 M0R2T5 61 aa9.44□□□□□ -0.9
CSPG4P13-201ENST00000565545 KRTAP10-6P60371 365 aaPredicted RBP9.43□□□□□ -0.9
CSPG4P13-201ENST00000565545 SPTSSBQ8NFR3 76 aa9.43□□□□□ -0.9
CSPG4P13-201ENST00000565545 LORP23490 312 aaPredicted RBP9.42□□□□□ -0.9
CSPG4P13-201ENST00000565545 LCA10Q71F78 164 aa9.38□□□□□ -0.91
CSPG4P13-201ENST00000565545 SMIM26A0A096LP01 95 aa9.35□□□□□ -0.91
CSPG4P13-201ENST00000565545 KRTAP3-3Q9BYR6 98 aa9.33□□□□□ -0.92
CSPG4P13-201ENST00000565545 CSAG1Q6PB30 78 aa9.28□□□□□ -0.92
CSPG4P13-201ENST00000565545 V9GYY9 64 aa9.24□□□□□ -0.93
CSPG4P13-201ENST00000565545 FLGP20930 4061 aaPredicted RBP9.24□□□□□ -0.93
CSPG4P13-201ENST00000565545 Q1T7F1 81 aa9.2□□□□□ -0.94
CSPG4P13-201ENST00000565545 LINC01558Q9Y6Z2 57 aa9.18□□□□□ -0.94
CSPG4P13-201ENST00000565545 KRTAP9-7A8MTY7 169 aa9.13□□□□□ -0.95
CSPG4P13-201ENST00000565545 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.11□□□□□ -0.95
CSPG4P13-201ENST00000565545 SEC61GP60059 68 aa9.11□□□□□ -0.95
CSPG4P13-201ENST00000565545 PRR15LQ9BU68 103 aa9.09□□□□□ -0.95
CSPG4P13-201ENST00000565545 A0A1B0GU69 56 aa9.08□□□□□ -0.96
CSPG4P13-201ENST00000565545 H0YAA0 97 aa9.08□□□□□ -0.96
CSPG4P13-201ENST00000565545 ADM2Q7Z4H4 148 aa8.98□□□□□ -0.97
CSPG4P13-201ENST00000565545 PSPHP1O15172 72 aa8.97□□□□□ -0.97
CSPG4P13-201ENST00000565545 KRTAP9-8Q9BYQ0 159 aa8.96□□□□□ -0.98
CSPG4P13-201ENST00000565545 KRTAP3-2Q9BYR7 98 aa8.96□□□□□ -0.98
CSPG4P13-201ENST00000565545 SSPOA2VEC9 5147 aa8.94□□□□□ -0.98
CSPG4P13-201ENST00000565545 USH2AO75445 5202 aa8.94□□□□□ -0.98
CSPG4P13-201ENST00000565545 Q5VV11 94 aa8.92□□□□□ -0.98
CSPG4P13-201ENST00000565545 P0C880 135 aa8.88□□□□□ -0.99
CSPG4P13-201ENST00000565545 A0A1B0GU33 70 aa8.85□□□□□ -0.99
CSPG4P13-201ENST00000565545 FCGBPQ9Y6R7 5405 aaPredicted RBP8.81□□□□□ -1
CSPG4P13-201ENST00000565545 UQCR11O14957 56 aa8.8□□□□□ -1
CSPG4P13-201ENST00000565545 MT2AP02795 61 aa8.8□□□□□ -1
CSPG4P13-201ENST00000565545 KRTAP19-1Q8IUB9 90 aa8.8□□□□□ -1
CSPG4P13-201ENST00000565545 CRIPTQ9P021 101 aa8.78□□□□□ -1
CSPG4P13-201ENST00000565545 M0QZ58 72 aa8.75□□□□□ -1.01
CSPG4P13-201ENST00000565545 A6NED7 52 aa8.74□□□□□ -1.01
CSPG4P13-201ENST00000565545 LCE2BO14633 110 aa8.74□□□□□ -1.01
CSPG4P13-201ENST00000565545 KRTAP10-10P60014 251 aa8.74□□□□□ -1.01
CSPG4P13-201ENST00000565545 MT1FP04733 61 aa8.73□□□□□ -1.01
CSPG4P13-201ENST00000565545 MACF1Q9UPN3 7388 aaKnown RBP8.72□□□□□ -1.01
CSPG4P13-201ENST00000565545 SYNE2Q8WXH0 6885 aaKnown RBP8.71□□□□□ -1.01
CSPG4P13-201ENST00000565545 R4GN34 69 aa8.7□□□□□ -1.02
CSPG4P13-201ENST00000565545 KRTAP9-3Q9BYQ3 159 aa8.69□□□□□ -1.02
CSPG4P13-201ENST00000565545 MIR22HGQ0VDD5 57 aa8.66□□□□□ -1.02
CSPG4P13-201ENST00000565545 SPATA8Q6RVD6 105 aa8.65□□□□□ -1.02
CSPG4P13-201ENST00000565545 KRTAP13-4Q3LI77 160 aa8.63□□□□□ -1.03
CSPG4P13-201ENST00000565545 CDC42SE1Q9NRR8 79 aa8.59□□□□□ -1.03
CSPG4P13-201ENST00000565545 SPRR2GQ9BYE4 73 aa8.56□□□□□ -1.04
CSPG4P13-201ENST00000565545 BRK1Q8WUW1 75 aa8.51□□□□□ -1.05
CSPG4P13-201ENST00000565545 KRTAP19-6Q3LI70 58 aa8.5□□□□□ -1.05
CSPG4P13-201ENST00000565545 A8MU10 97 aa8.48□□□□□ -1.05
CSPG4P13-201ENST00000565545 A0A0D9SG42 100 aa8.47□□□□□ -1.05
CSPG4P13-201ENST00000565545 LINC01554Q52M75 96 aa8.47□□□□□ -1.05
CSPG4P13-201ENST00000565545 A6NN06 94 aa8.43□□□□□ -1.06
CSPG4P13-201ENST00000565545 KRTAP6-3Q3LI67 103 aa8.38□□□□□ -1.07
CSPG4P13-201ENST00000565545 K7ERS5 55 aa8.36□□□□□ -1.07
CSPG4P13-201ENST00000565545 KRTAP19-8Q3LI54 63 aa8.36□□□□□ -1.07
CSPG4P13-201ENST00000565545 KRTAP12-1P59990 96 aa8.34□□□□□ -1.07
CSPG4P13-201ENST00000565545 SPINT4Q6UDR6 99 aa8.31□□□□□ -1.08
CSPG4P13-201ENST00000565545 KRTAP12-2P59991 146 aa8.28□□□□□ -1.08
CSPG4P13-201ENST00000565545 PRO0628Q9UI54 55 aa8.28□□□□□ -1.08
CSPG4P13-201ENST00000565545 PLAC4Q8WY50 150 aa8.27□□□□□ -1.09
CSPG4P13-201ENST00000565545 NEBP20929 6669 aa8.26□□□□□ -1.09
CSPG4P13-201ENST00000565545 MT1BP07438 61 aa8.21□□□□□ -1.1
CSPG4P13-201ENST00000565545 SVIPQ8NHG7 77 aa8.19□□□□□ -1.1
CSPG4P13-201ENST00000565545 CAMK2N1Q7Z7J9 78 aa8.13□□□□□ -1.11
CSPG4P13-201ENST00000565545 PMAIP1Q13794 54 aa8.07□□□□□ -1.12
CSPG4P13-201ENST00000565545 KRTAP20-1Q3LI63 56 aa7.99□□□□□ -1.13
CSPG4P13-201ENST00000565545 MUC12Q9UKN1 5478 aa7.96□□□□□ -1.13
CSPG4P13-201ENST00000565545 ROMO1P60602 79 aa7.95□□□□□ -1.14
CSPG4P13-201ENST00000565545 PRO2289Q9P1D8 64 aa7.93□□□□□ -1.14
CSPG4P13-201ENST00000565545 MT1XP80297 61 aa7.91□□□□□ -1.14
CSPG4P13-201ENST00000565545 C10orf95Q9H7T3 257 aa7.9□□□□□ -1.14
CSPG4P13-201ENST00000565545 KRTAP10-5P60370 271 aa7.89□□□□□ -1.15
CSPG4P13-201ENST00000565545 KRTAP5-9P26371 169 aa7.78□□□□□ -1.16
CSPG4P13-201ENST00000565545 KRTAP25-1Q3LHN0 102 aa7.75□□□□□ -1.17
CSPG4P13-201ENST00000565545 TNP1P09430 55 aa7.74□□□□□ -1.17
CSPG4P13-201ENST00000565545 KMT2DO14686 5537 aa7.72□□□□□ -1.17
CSPG4P13-201ENST00000565545 KTN1-AS1Q86SY8 53 aa7.7□□□□□ -1.18
CSPG4P13-201ENST00000565545 MDN1Q9NU22 5596 aa7.68□□□□□ -1.18
CSPG4P13-201ENST00000565545 KRTAP2-3P0C7H8 128 aa7.67□□□□□ -1.18
CSPG4P13-201ENST00000565545 KRTAP2-4Q9BYR9 128 aa7.67□□□□□ -1.18
CSPG4P13-201ENST00000565545 KRTAP10-7P60409 375 aaPredicted RBP7.55□□□□□ -1.2
CSPG4P13-201ENST00000565545 KRTAP10-12P60413 245 aa7.54□□□□□ -1.2
CSPG4P13-201ENST00000565545 KRTAP23-1A1A580 65 aa7.53□□□□□ -1.2
CSPG4P13-201ENST00000565545 SPRR2FQ96RM1 72 aa7.53□□□□□ -1.2
CSPG4P13-201ENST00000565545 SPRR2EP22531 72 aa7.52□□□□□ -1.21
CSPG4P13-201ENST00000565545 SPRR2BP35325 72 aa7.52□□□□□ -1.21
CSPG4P13-201ENST00000565545 SPRR2AP35326 72 aa7.52□□□□□ -1.21
CSPG4P13-201ENST00000565545 PRAC1Q96KF2 57 aa7.5□□□□□ -1.21
CSPG4P13-201ENST00000565545 PP632Q6XCG6 107 aa7.47□□□□□ -1.21
CSPG4P13-201ENST00000565545 KRTAP2-2Q9BYT5 123 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms