RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 KRTAP4-6Q9BYQ5 205 aa4.05□□□□□ -1.76
MAP1LC3B-205ENST00000564638 ACYP2P14621 99 aa4.04□□□□□ -1.76
MAP1LC3B-205ENST00000564638 DMAC1Q96GE9 116 aa4.04□□□□□ -1.76
MAP1LC3B-205ENST00000564638 CHKB-CPT1BH3BT56 60 aa4.01□□□□□ -1.77
MAP1LC3B-205ENST00000564638 Q75L30 129 aa4.01□□□□□ -1.77
MAP1LC3B-205ENST00000564638 TPRXLQ17RH7 258 aa4□□□□□ -1.77
MAP1LC3B-205ENST00000564638 PSPHP1O15172 72 aa3.98□□□□□ -1.77
MAP1LC3B-205ENST00000564638 A8MUN3 132 aa3.97□□□□□ -1.77
MAP1LC3B-205ENST00000564638 PRR15LQ9BU68 103 aa3.97□□□□□ -1.77
MAP1LC3B-205ENST00000564638 ATP11AUNQ6ZP68 121 aa3.96□□□□□ -1.78
MAP1LC3B-205ENST00000564638 LINC01558Q9Y6Z2 57 aa3.96□□□□□ -1.78
MAP1LC3B-205ENST00000564638 RPL37P61927 97 aaKnown RBP3.95□□□□□ -1.78
MAP1LC3B-205ENST00000564638 SPINK7P58062 85 aa3.94□□□□□ -1.78
MAP1LC3B-205ENST00000564638 Q5VV11 94 aa3.94□□□□□ -1.78
MAP1LC3B-205ENST00000564638 BRK1Q8WUW1 75 aa3.93□□□□□ -1.78
MAP1LC3B-205ENST00000564638 SPTSSBQ8NFR3 76 aa3.91□□□□□ -1.78
MAP1LC3B-205ENST00000564638 PRO0628Q9UI54 55 aa3.91□□□□□ -1.78
MAP1LC3B-205ENST00000564638 SEC61BP60468 96 aaKnown RBP3.9□□□□□ -1.79
MAP1LC3B-205ENST00000564638 KRTAP9-7A8MTY7 169 aa3.89□□□□□ -1.79
MAP1LC3B-205ENST00000564638 SVIPQ8NHG7 77 aa3.89□□□□□ -1.79
MAP1LC3B-205ENST00000564638 A6NED7 52 aa3.88□□□□□ -1.79
MAP1LC3B-205ENST00000564638 COX6B2Q6YFQ2 88 aa3.88□□□□□ -1.79
MAP1LC3B-205ENST00000564638 MUC17Q685J3 4493 aa3.88□□□□□ -1.79
MAP1LC3B-205ENST00000564638 A0A1B0GU69 56 aa3.87□□□□□ -1.79
MAP1LC3B-205ENST00000564638 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
MAP1LC3B-205ENST00000564638 KRTAP19-1Q8IUB9 90 aa3.84□□□□□ -1.79
MAP1LC3B-205ENST00000564638 KRTAP4-8Q9BYQ9 185 aa3.84□□□□□ -1.79
MAP1LC3B-205ENST00000564638 KRTAP3-1Q9BYR8 98 aa3.84□□□□□ -1.79
MAP1LC3B-205ENST00000564638 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.83□□□□□ -1.8
MAP1LC3B-205ENST00000564638 SEC61GP60059 68 aa3.83□□□□□ -1.8
MAP1LC3B-205ENST00000564638 KRTAP4-1Q9BYQ7 146 aa3.83□□□□□ -1.8
MAP1LC3B-205ENST00000564638 CDC42SE1Q9NRR8 79 aa3.82□□□□□ -1.8
MAP1LC3B-205ENST00000564638 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
MAP1LC3B-205ENST00000564638 LCA10Q71F78 164 aa3.79□□□□□ -1.8
MAP1LC3B-205ENST00000564638 SSPOA2VEC9 5147 aa3.78□□□□□ -1.8
MAP1LC3B-205ENST00000564638 UQCR11O14957 56 aa3.77□□□□□ -1.81
MAP1LC3B-205ENST00000564638 S4R3F8 94 aa3.77□□□□□ -1.81
MAP1LC3B-205ENST00000564638 A8MU10 97 aa3.76□□□□□ -1.81
MAP1LC3B-205ENST00000564638 RBM12B-AS1Q9P1G2 102 aa3.76□□□□□ -1.81
MAP1LC3B-205ENST00000564638 KRTAP23-1A1A580 65 aa3.75□□□□□ -1.81
MAP1LC3B-205ENST00000564638 MIR22HGQ0VDD5 57 aa3.74□□□□□ -1.81
MAP1LC3B-205ENST00000564638 H1FX-AS1Q4G0G2 97 aa3.74□□□□□ -1.81
MAP1LC3B-205ENST00000564638 SPATA8Q6RVD6 105 aa3.73□□□□□ -1.81
MAP1LC3B-205ENST00000564638 PMAIP1Q13794 54 aa3.71□□□□□ -1.82
MAP1LC3B-205ENST00000564638 USH2AO75445 5202 aa3.7□□□□□ -1.82
MAP1LC3B-205ENST00000564638 A0A1B0GU33 70 aa3.7□□□□□ -1.82
MAP1LC3B-205ENST00000564638 FCGBPQ9Y6R7 5405 aaPredicted RBP3.69□□□□□ -1.82
MAP1LC3B-205ENST00000564638 KRTAP19-2Q3LHN2 52 aa3.68□□□□□ -1.82
MAP1LC3B-205ENST00000564638 SYNE2Q8WXH0 6885 aaKnown RBP3.67□□□□□ -1.82
MAP1LC3B-205ENST00000564638 A6NN06 94 aa3.67□□□□□ -1.82
MAP1LC3B-205ENST00000564638 LCE4AQ5TA78 99 aa3.66□□□□□ -1.82
MAP1LC3B-205ENST00000564638 MACF1Q9UPN3 7388 aaKnown RBP3.66□□□□□ -1.82
MAP1LC3B-205ENST00000564638 H0YAA0 97 aa3.65□□□□□ -1.83
MAP1LC3B-205ENST00000564638 CSAG1Q6PB30 78 aa3.65□□□□□ -1.83
MAP1LC3B-205ENST00000564638 M0R2T5 61 aa3.64□□□□□ -1.83
MAP1LC3B-205ENST00000564638 MT1HP80294 61 aa3.64□□□□□ -1.83
MAP1LC3B-205ENST00000564638 LCE3BQ5TA77 95 aa3.63□□□□□ -1.83
MAP1LC3B-205ENST00000564638 FLGP20930 4061 aaPredicted RBP3.62□□□□□ -1.83
MAP1LC3B-205ENST00000564638 KRTAP10-6P60371 365 aaPredicted RBP3.62□□□□□ -1.83
MAP1LC3B-205ENST00000564638 KTN1-AS1Q86SY8 53 aa3.61□□□□□ -1.83
MAP1LC3B-205ENST00000564638 ADM2Q7Z4H4 148 aa3.6□□□□□ -1.83
MAP1LC3B-205ENST00000564638 K7ERS5 55 aa3.59□□□□□ -1.83
MAP1LC3B-205ENST00000564638 P0C880 135 aa3.58□□□□□ -1.84
MAP1LC3B-205ENST00000564638 KRTAP9-9Q9BYP9 154 aa3.58□□□□□ -1.84
MAP1LC3B-205ENST00000564638 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
MAP1LC3B-205ENST00000564638 KRTAP13-4Q3LI77 160 aa3.54□□□□□ -1.84
MAP1LC3B-205ENST00000564638 A0A0D9SG42 100 aa3.53□□□□□ -1.84
MAP1LC3B-205ENST00000564638 M0QZ58 72 aa3.53□□□□□ -1.84
MAP1LC3B-205ENST00000564638 KRTAP9-3Q9BYQ3 159 aa3.5□□□□□ -1.85
MAP1LC3B-205ENST00000564638 NEBP20929 6669 aa3.48□□□□□ -1.85
MAP1LC3B-205ENST00000564638 R4GN34 69 aa3.47□□□□□ -1.85
MAP1LC3B-205ENST00000564638 KRTAP4-8A0A0G2JLE6 195 aa3.46□□□□□ -1.86
MAP1LC3B-205ENST00000564638 PRAC1Q96KF2 57 aa3.46□□□□□ -1.86
MAP1LC3B-205ENST00000564638 KRTAP9-8Q9BYQ0 159 aa3.45□□□□□ -1.86
MAP1LC3B-205ENST00000564638 SPINT4Q6UDR6 99 aa3.44□□□□□ -1.86
MAP1LC3B-205ENST00000564638 MT2AP02795 61 aa3.43□□□□□ -1.86
MAP1LC3B-205ENST00000564638 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
MAP1LC3B-205ENST00000564638 KRTAP10-10P60014 251 aa3.43□□□□□ -1.86
MAP1LC3B-205ENST00000564638 ROMO1P60602 79 aa3.43□□□□□ -1.86
MAP1LC3B-205ENST00000564638 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
MAP1LC3B-205ENST00000564638 KRTAP12-2P59991 146 aa3.42□□□□□ -1.86
MAP1LC3B-205ENST00000564638 LINC01554Q52M75 96 aa3.42□□□□□ -1.86
MAP1LC3B-205ENST00000564638 MUC12Q9UKN1 5478 aa3.41□□□□□ -1.86
MAP1LC3B-205ENST00000564638 MT1FP04733 61 aa3.41□□□□□ -1.86
MAP1LC3B-205ENST00000564638 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
MAP1LC3B-205ENST00000564638 CRIPTQ9P021 101 aa3.39□□□□□ -1.87
MAP1LC3B-205ENST00000564638 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
MAP1LC3B-205ENST00000564638 KRTAP15-1Q3LI76 137 aa3.36□□□□□ -1.87
MAP1LC3B-205ENST00000564638 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
MAP1LC3B-205ENST00000564638 KRTAP20-1Q3LI63 56 aa3.33□□□□□ -1.88
MAP1LC3B-205ENST00000564638 KRTAP4-9Q9BYQ8 210 aa3.32□□□□□ -1.88
MAP1LC3B-205ENST00000564638 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
MAP1LC3B-205ENST00000564638 KMT2DO14686 5537 aa3.3□□□□□ -1.88
MAP1LC3B-205ENST00000564638 CAMK2N1Q7Z7J9 78 aa3.29□□□□□ -1.88
MAP1LC3B-205ENST00000564638 A0A0A0MQY5 61 aa3.27□□□□□ -1.89
MAP1LC3B-205ENST00000564638 KRTAP19-6Q3LI70 58 aa3.26□□□□□ -1.89
MAP1LC3B-205ENST00000564638 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
MAP1LC3B-205ENST00000564638 MDN1Q9NU22 5596 aa3.25□□□□□ -1.89
MAP1LC3B-205ENST00000564638 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
MAP1LC3B-205ENST00000564638 C10orf95Q9H7T3 257 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms