RNA–Protein interactions for RNA: ENST00000564201.1

NR4A1-220, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5

Gene NR4A1, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-220ENST00000564201 C5orf47Q569G3 176 aa6.02□□□□□ -1.45
NR4A1-220ENST00000564201 C1orf64Q8NEQ6 169 aa6.02□□□□□ -1.45
NR4A1-220ENST00000564201 CYP4F30PQ9H0H9 118 aa6.02□□□□□ -1.45
NR4A1-220ENST00000564201 SMIM20Q8N5G0 67 aa6.01□□□□□ -1.45
NR4A1-220ENST00000564201 TRAV7A0A075B6U4 112 aa6□□□□□ -1.45
NR4A1-220ENST00000564201 C4orf26Q17RF5 130 aa6□□□□□ -1.45
NR4A1-220ENST00000564201 FAT4Q6V0I7 4981 aa5.98□□□□□ -1.45
NR4A1-220ENST00000564201 MT1HP80294 61 aa5.96□□□□□ -1.46
NR4A1-220ENST00000564201 H3BPC8 53 aa5.95□□□□□ -1.46
NR4A1-220ENST00000564201 M0R2T5 61 aa5.93□□□□□ -1.46
NR4A1-220ENST00000564201 KLKP1Q107X0 134 aa5.93□□□□□ -1.46
NR4A1-220ENST00000564201 SERP2Q8N6R1 65 aa5.93□□□□□ -1.46
NR4A1-220ENST00000564201 KRTAP4-11Q9BYQ6 195 aa5.92□□□□□ -1.46
NR4A1-220ENST00000564201 H1FX-AS1Q4G0G2 97 aa5.91□□□□□ -1.46
NR4A1-220ENST00000564201 SNURFQ9Y675 71 aa5.89□□□□□ -1.47
NR4A1-220ENST00000564201 C20orf197Q8N268 126 aa5.88□□□□□ -1.47
NR4A1-220ENST00000564201 KRTAP4-2Q9BYR5 136 aa5.87□□□□□ -1.47
NR4A1-220ENST00000564201 COX7CP15954 63 aa5.84□□□□□ -1.47
NR4A1-220ENST00000564201 ANAPC13Q9BS18 74 aa5.84□□□□□ -1.47
NR4A1-220ENST00000564201 FLGP20930 4061 aaPredicted RBP5.83□□□□□ -1.48
NR4A1-220ENST00000564201 KRTAP10-6P60371 365 aaPredicted RBP5.8□□□□□ -1.48
NR4A1-220ENST00000564201 S4R3F8 94 aa5.8□□□□□ -1.48
NR4A1-220ENST00000564201 A8MUN3 132 aa5.77□□□□□ -1.49
NR4A1-220ENST00000564201 LCA10Q71F78 164 aa5.76□□□□□ -1.49
NR4A1-220ENST00000564201 DMAC1Q96GE9 116 aa5.75□□□□□ -1.49
NR4A1-220ENST00000564201 CCDC179H3BU77 68 aa5.72□□□□□ -1.49
NR4A1-220ENST00000564201 CYSTM1Q9H1C7 97 aa5.72□□□□□ -1.49
NR4A1-220ENST00000564201 CSAG1Q6PB30 78 aa5.7□□□□□ -1.5
NR4A1-220ENST00000564201 SPANXA2-OT1Q8N9U9 137 aa5.7□□□□□ -1.5
NR4A1-220ENST00000564201 NDUFC1O43677 76 aa5.69□□□□□ -1.5
NR4A1-220ENST00000564201 ACYP2P14621 99 aa5.69□□□□□ -1.5
NR4A1-220ENST00000564201 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
NR4A1-220ENST00000564201 H7BZZ5 65 aa5.67□□□□□ -1.5
NR4A1-220ENST00000564201 MT2AP02795 61 aa5.65□□□□□ -1.5
NR4A1-220ENST00000564201 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.5
NR4A1-220ENST00000564201 KRTAP10-10P60014 251 aa5.63□□□□□ -1.51
NR4A1-220ENST00000564201 CRCT1Q9UGL9 99 aa5.63□□□□□ -1.51
NR4A1-220ENST00000564201 CHKB-CPT1BH3BT56 60 aa5.62□□□□□ -1.51
NR4A1-220ENST00000564201 MT1FP04733 61 aa5.62□□□□□ -1.51
NR4A1-220ENST00000564201 FSIP2Q5CZC0 6907 aa5.57□□□□□ -1.52
NR4A1-220ENST00000564201 COA5Q86WW8 74 aa5.56□□□□□ -1.52
NR4A1-220ENST00000564201 SPTSSBQ8NFR3 76 aa5.55□□□□□ -1.52
NR4A1-220ENST00000564201 ADM2Q7Z4H4 148 aa5.51□□□□□ -1.53
NR4A1-220ENST00000564201 H0YAA0 97 aa5.49□□□□□ -1.53
NR4A1-220ENST00000564201 ATP5EP56381 51 aaPredicted RBP5.49□□□□□ -1.53
NR4A1-220ENST00000564201 TMEM258P61165 79 aa5.49□□□□□ -1.53
NR4A1-220ENST00000564201 PCP4P48539 62 aa5.48□□□□□ -1.53
NR4A1-220ENST00000564201 P0C880 135 aa5.42□□□□□ -1.54
NR4A1-220ENST00000564201 CRIPTQ9P021 101 aa5.38□□□□□ -1.55
NR4A1-220ENST00000564201 SPRR2GQ9BYE4 73 aa5.35□□□□□ -1.55
NR4A1-220ENST00000564201 SEC61GP60059 68 aa5.34□□□□□ -1.55
NR4A1-220ENST00000564201 R4GN34 69 aa5.33□□□□□ -1.56
NR4A1-220ENST00000564201 M0QZ58 72 aa5.32□□□□□ -1.56
NR4A1-220ENST00000564201 SERP1Q9Y6X1 66 aa5.32□□□□□ -1.56
NR4A1-220ENST00000564201 SVIPQ8NHG7 77 aa5.28□□□□□ -1.56
NR4A1-220ENST00000564201 A0A1B0GU69 56 aa5.27□□□□□ -1.57
NR4A1-220ENST00000564201 Q5VV11 94 aa5.27□□□□□ -1.57
NR4A1-220ENST00000564201 KRTAP19-8Q3LI54 63 aa5.26□□□□□ -1.57
NR4A1-220ENST00000564201 LINC01554Q52M75 96 aa5.26□□□□□ -1.57
NR4A1-220ENST00000564201 USH2AO75445 5202 aa5.25□□□□□ -1.57
NR4A1-220ENST00000564201 MT1BP07438 61 aa5.24□□□□□ -1.57
NR4A1-220ENST00000564201 LINC01558Q9Y6Z2 57 aa5.22□□□□□ -1.57
NR4A1-220ENST00000564201 A0A1B0GU33 70 aa5.21□□□□□ -1.58
NR4A1-220ENST00000564201 KRTAP13-4Q3LI77 160 aa5.2□□□□□ -1.58
NR4A1-220ENST00000564201 PRR15LQ9BU68 103 aa5.2□□□□□ -1.58
NR4A1-220ENST00000564201 SPATA8Q6RVD6 105 aa5.17□□□□□ -1.58
NR4A1-220ENST00000564201 PLAC4Q8WY50 150 aa5.15□□□□□ -1.59
NR4A1-220ENST00000564201 SMIM26A0A096LP01 95 aa5.14□□□□□ -1.59
NR4A1-220ENST00000564201 RPS28P62857 69 aaKnown RBP5.14□□□□□ -1.59
NR4A1-220ENST00000564201 KRTAP19-6Q3LI70 58 aa5.14□□□□□ -1.59
NR4A1-220ENST00000564201 A0A0D9SG42 100 aa5.12□□□□□ -1.59
NR4A1-220ENST00000564201 V9GYY9 64 aa5.12□□□□□ -1.59
NR4A1-220ENST00000564201 SSPOA2VEC9 5147 aa5.12□□□□□ -1.59
NR4A1-220ENST00000564201 Q1T7F1 81 aa5.1□□□□□ -1.59
NR4A1-220ENST00000564201 PSPHP1O15172 72 aa5.09□□□□□ -1.59
NR4A1-220ENST00000564201 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
NR4A1-220ENST00000564201 A6NN06 94 aa5.07□□□□□ -1.6
NR4A1-220ENST00000564201 A8MU10 97 aa5.04□□□□□ -1.6
NR4A1-220ENST00000564201 KRTAP10-5P60370 271 aa5.04□□□□□ -1.6
NR4A1-220ENST00000564201 UQCR11O14957 56 aa5.03□□□□□ -1.6
NR4A1-220ENST00000564201 SPINT4Q6UDR6 99 aa5.02□□□□□ -1.61
NR4A1-220ENST00000564201 MT1XP80297 61 aa4.99□□□□□ -1.61
NR4A1-220ENST00000564201 PRO2289Q9P1D8 64 aa4.99□□□□□ -1.61
NR4A1-220ENST00000564201 FCGBPQ9Y6R7 5405 aaPredicted RBP4.98□□□□□ -1.61
NR4A1-220ENST00000564201 KRTAP12-1P59990 96 aa4.98□□□□□ -1.61
NR4A1-220ENST00000564201 CAMK2N1Q7Z7J9 78 aa4.97□□□□□ -1.61
NR4A1-220ENST00000564201 KRTAP12-2P59991 146 aa4.96□□□□□ -1.62
NR4A1-220ENST00000564201 MIR22HGQ0VDD5 57 aa4.96□□□□□ -1.62
NR4A1-220ENST00000564201 A6NED7 52 aa4.93□□□□□ -1.62
NR4A1-220ENST00000564201 SYNE2Q8WXH0 6885 aaKnown RBP4.89□□□□□ -1.63
NR4A1-220ENST00000564201 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
NR4A1-220ENST00000564201 A0A0A0MQY5 61 aa4.83□□□□□ -1.64
NR4A1-220ENST00000564201 MACF1Q9UPN3 7388 aaKnown RBP4.82□□□□□ -1.64
NR4A1-220ENST00000564201 K7ERS5 55 aa4.8□□□□□ -1.64
NR4A1-220ENST00000564201 KRTAP10-7P60409 375 aaPredicted RBP4.79□□□□□ -1.64
NR4A1-220ENST00000564201 CDC42SE1Q9NRR8 79 aa4.75□□□□□ -1.65
NR4A1-220ENST00000564201 C10orf95Q9H7T3 257 aa4.74□□□□□ -1.65
NR4A1-220ENST00000564201 KRTAP10-12P60413 245 aa4.73□□□□□ -1.65
NR4A1-220ENST00000564201 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
NR4A1-220ENST00000564201 KRTAP20-1Q3LI63 56 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms