RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
TPM1-231ENST00000561395 KRTAP9-3Q9BYQ3 159 aa4.04□□□□□ -1.76
TPM1-231ENST00000561395 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
TPM1-231ENST00000561395 FAM236DA0A1B0GTK5 79 aa4.03□□□□□ -1.76
TPM1-231ENST00000561395 IGKV2-30P06310 120 aa4.03□□□□□ -1.76
TPM1-231ENST00000561395 FAM236CP0DP71 79 aa4.03□□□□□ -1.76
TPM1-231ENST00000561395 ATP5EP56381 51 aaPredicted RBP4.03□□□□□ -1.76
TPM1-231ENST00000561395 TPRXLQ17RH7 258 aa4.03□□□□□ -1.76
TPM1-231ENST00000561395 MPLKIPQ8TAP9 179 aa4.02□□□□□ -1.77
TPM1-231ENST00000561395 CYP4F30PQ9H0H9 118 aa4.02□□□□□ -1.77
TPM1-231ENST00000561395 RPL37P61927 97 aaKnown RBP4.01□□□□□ -1.77
TPM1-231ENST00000561395 PCOTHQ58A44 107 aa4.01□□□□□ -1.77
TPM1-231ENST00000561395 SPANXA2-OT1Q8N9U9 137 aa4.01□□□□□ -1.77
TPM1-231ENST00000561395 IGKV2D-30A0A075B6S6 120 aa4□□□□□ -1.77
TPM1-231ENST00000561395 C7orf65Q6ZTY9 151 aa3.99□□□□□ -1.77
TPM1-231ENST00000561395 ATP11AUNQ6ZP68 121 aa3.97□□□□□ -1.77
TPM1-231ENST00000561395 HRES1P13985 223 aa3.96□□□□□ -1.78
TPM1-231ENST00000561395 SERP1Q9Y6X1 66 aa3.95□□□□□ -1.78
TPM1-231ENST00000561395 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
TPM1-231ENST00000561395 SPINK7P58062 85 aa3.93□□□□□ -1.78
TPM1-231ENST00000561395 RPS28P62857 69 aaKnown RBP3.93□□□□□ -1.78
TPM1-231ENST00000561395 DMAC1Q96GE9 116 aa3.92□□□□□ -1.78
TPM1-231ENST00000561395 KRTAP4-7Q9BYR0 210 aa3.91□□□□□ -1.78
TPM1-231ENST00000561395 KRTAP4-1Q9BYQ7 146 aa3.9□□□□□ -1.79
TPM1-231ENST00000561395 KRTAP4-9Q9BYQ8 210 aa3.9□□□□□ -1.79
TPM1-231ENST00000561395 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
TPM1-231ENST00000561395 C4orf26Q17RF5 130 aa3.88□□□□□ -1.79
TPM1-231ENST00000561395 COA5Q86WW8 74 aa3.88□□□□□ -1.79
TPM1-231ENST00000561395 A8MUN3 132 aa3.87□□□□□ -1.79
TPM1-231ENST00000561395 M0R2T5 61 aa3.87□□□□□ -1.79
TPM1-231ENST00000561395 ACYP2P14621 99 aa3.87□□□□□ -1.79
TPM1-231ENST00000561395 MT1HP80294 61 aa3.86□□□□□ -1.79
TPM1-231ENST00000561395 COX6B2Q6YFQ2 88 aa3.84□□□□□ -1.79
TPM1-231ENST00000561395 SMIM26A0A096LP01 95 aa3.83□□□□□ -1.8
TPM1-231ENST00000561395 KRTAP10-6P60371 365 aaPredicted RBP3.83□□□□□ -1.8
TPM1-231ENST00000561395 KRTAP19-2Q3LHN2 52 aa3.82□□□□□ -1.8
TPM1-231ENST00000561395 CHKB-CPT1BH3BT56 60 aa3.81□□□□□ -1.8
TPM1-231ENST00000561395 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
TPM1-231ENST00000561395 RBM12B-AS1Q9P1G2 102 aa3.78□□□□□ -1.8
TPM1-231ENST00000561395 Q1T7F1 81 aa3.77□□□□□ -1.81
TPM1-231ENST00000561395 FLGP20930 4061 aaPredicted RBP3.76□□□□□ -1.81
TPM1-231ENST00000561395 H1FX-AS1Q4G0G2 97 aa3.75□□□□□ -1.81
TPM1-231ENST00000561395 KRTAP4-2Q9BYR5 136 aa3.75□□□□□ -1.81
TPM1-231ENST00000561395 V9GYY9 64 aa3.75□□□□□ -1.81
TPM1-231ENST00000561395 SSPOA2VEC9 5147 aa3.75□□□□□ -1.81
TPM1-231ENST00000561395 SPTSSBQ8NFR3 76 aa3.74□□□□□ -1.81
TPM1-231ENST00000561395 FCGBPQ9Y6R7 5405 aaPredicted RBP3.73□□□□□ -1.81
TPM1-231ENST00000561395 LINC01558Q9Y6Z2 57 aa3.73□□□□□ -1.81
TPM1-231ENST00000561395 S4R3F8 94 aa3.73□□□□□ -1.81
TPM1-231ENST00000561395 USH2AO75445 5202 aa3.72□□□□□ -1.81
TPM1-231ENST00000561395 LCA10Q71F78 164 aa3.72□□□□□ -1.81
TPM1-231ENST00000561395 PRR15LQ9BU68 103 aa3.7□□□□□ -1.82
TPM1-231ENST00000561395 SYNE2Q8WXH0 6885 aaKnown RBP3.69□□□□□ -1.82
TPM1-231ENST00000561395 PSPHP1O15172 72 aa3.69□□□□□ -1.82
TPM1-231ENST00000561395 MACF1Q9UPN3 7388 aaKnown RBP3.67□□□□□ -1.82
TPM1-231ENST00000561395 Q5VV11 94 aa3.67□□□□□ -1.82
TPM1-231ENST00000561395 A0A1B0GU69 56 aa3.65□□□□□ -1.83
TPM1-231ENST00000561395 SEC61GP60059 68 aa3.63□□□□□ -1.83
TPM1-231ENST00000561395 CSAG1Q6PB30 78 aa3.63□□□□□ -1.83
TPM1-231ENST00000561395 PRAC1Q96KF2 57 aa3.6□□□□□ -1.83
TPM1-231ENST00000561395 A6NED7 52 aa3.58□□□□□ -1.84
TPM1-231ENST00000561395 H0YAA0 97 aa3.58□□□□□ -1.84
TPM1-231ENST00000561395 KRTAP9-8Q9BYQ0 159 aa3.58□□□□□ -1.84
TPM1-231ENST00000561395 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
TPM1-231ENST00000561395 ADM2Q7Z4H4 148 aa3.56□□□□□ -1.84
TPM1-231ENST00000561395 UQCR11O14957 56 aa3.55□□□□□ -1.84
TPM1-231ENST00000561395 P0C880 135 aa3.55□□□□□ -1.84
TPM1-231ENST00000561395 A0A1B0GU33 70 aa3.54□□□□□ -1.84
TPM1-231ENST00000561395 BRK1Q8WUW1 75 aa3.54□□□□□ -1.84
TPM1-231ENST00000561395 CDC42SE1Q9NRR8 79 aa3.53□□□□□ -1.84
TPM1-231ENST00000561395 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
TPM1-231ENST00000561395 SPATA8Q6RVD6 105 aa3.51□□□□□ -1.85
TPM1-231ENST00000561395 A8MU10 97 aa3.5□□□□□ -1.85
TPM1-231ENST00000561395 MT2AP02795 61 aa3.5□□□□□ -1.85
TPM1-231ENST00000561395 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
TPM1-231ENST00000561395 KRTAP10-10P60014 251 aa3.49□□□□□ -1.85
TPM1-231ENST00000561395 KRTAP19-6Q3LI70 58 aa3.49□□□□□ -1.85
TPM1-231ENST00000561395 KRTAP13-4Q3LI77 160 aa3.49□□□□□ -1.85
TPM1-231ENST00000561395 NEBP20929 6669 aa3.48□□□□□ -1.85
TPM1-231ENST00000561395 MT1FP04733 61 aa3.48□□□□□ -1.85
TPM1-231ENST00000561395 PRO0628Q9UI54 55 aa3.47□□□□□ -1.85
TPM1-231ENST00000561395 M0QZ58 72 aa3.45□□□□□ -1.86
TPM1-231ENST00000561395 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
TPM1-231ENST00000561395 R4GN34 69 aa3.43□□□□□ -1.86
TPM1-231ENST00000561395 A0A0D9SG42 100 aa3.41□□□□□ -1.86
TPM1-231ENST00000561395 CRIPTQ9P021 101 aa3.41□□□□□ -1.86
TPM1-231ENST00000561395 MUC12Q9UKN1 5478 aa3.4□□□□□ -1.86
TPM1-231ENST00000561395 LINC01554Q52M75 96 aa3.36□□□□□ -1.87
TPM1-231ENST00000561395 KRTAP12-1P59990 96 aa3.35□□□□□ -1.87
TPM1-231ENST00000561395 A6NN06 94 aa3.34□□□□□ -1.87
TPM1-231ENST00000561395 K7ERS5 55 aa3.34□□□□□ -1.87
TPM1-231ENST00000561395 KRTAP12-2P59991 146 aa3.34□□□□□ -1.87
TPM1-231ENST00000561395 PMAIP1Q13794 54 aa3.34□□□□□ -1.87
TPM1-231ENST00000561395 SPRR2GQ9BYE4 73 aa3.34□□□□□ -1.87
TPM1-231ENST00000561395 SPINT4Q6UDR6 99 aa3.32□□□□□ -1.88
TPM1-231ENST00000561395 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
TPM1-231ENST00000561395 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
TPM1-231ENST00000561395 LCE1AQ5T7P2 110 aa3.27□□□□□ -1.89
TPM1-231ENST00000561395 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
TPM1-231ENST00000561395 MDN1Q9NU22 5596 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms