RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 KRTAP10-10P60014 251 aa5.21□□□□□ -1.58
TPM1-229ENST00000561242 CHKB-CPT1BH3BT56 60 aa5.2□□□□□ -1.58
TPM1-229ENST00000561242 KLKP1Q107X0 134 aa5.2□□□□□ -1.58
TPM1-229ENST00000561242 FAT4Q6V0I7 4981 aa5.19□□□□□ -1.58
TPM1-229ENST00000561242 ACYP2P14621 99 aa5.19□□□□□ -1.58
TPM1-229ENST00000561242 C20orf197Q8N268 126 aa5.19□□□□□ -1.58
TPM1-229ENST00000561242 SPTSSBQ8NFR3 76 aa5.19□□□□□ -1.58
TPM1-229ENST00000561242 SNURFQ9Y675 71 aa5.17□□□□□ -1.58
TPM1-229ENST00000561242 LCA10Q71F78 164 aa5.16□□□□□ -1.58
TPM1-229ENST00000561242 ANAPC13Q9BS18 74 aa5.16□□□□□ -1.58
TPM1-229ENST00000561242 COX7CP15954 63 aa5.14□□□□□ -1.59
TPM1-229ENST00000561242 KRTAP3-1Q9BYR8 98 aa5.14□□□□□ -1.59
TPM1-229ENST00000561242 DMAC1Q96GE9 116 aa5.11□□□□□ -1.59
TPM1-229ENST00000561242 SPANXA2-OT1Q8N9U9 137 aa5.08□□□□□ -1.6
TPM1-229ENST00000561242 KRTAP9-8Q9BYQ0 159 aa5.07□□□□□ -1.6
TPM1-229ENST00000561242 MT2AP02795 61 aa5.06□□□□□ -1.6
TPM1-229ENST00000561242 LCE3BQ5TA77 95 aa5.06□□□□□ -1.6
TPM1-229ENST00000561242 FLGP20930 4061 aaPredicted RBP5.03□□□□□ -1.6
TPM1-229ENST00000561242 SEC61GP60059 68 aa5.01□□□□□ -1.61
TPM1-229ENST00000561242 CRIPTQ9P021 101 aa5.01□□□□□ -1.61
TPM1-229ENST00000561242 MT1FP04733 61 aa5□□□□□ -1.61
TPM1-229ENST00000561242 ADM2Q7Z4H4 148 aa5□□□□□ -1.61
TPM1-229ENST00000561242 H0YAA0 97 aa4.98□□□□□ -1.61
TPM1-229ENST00000561242 CRCT1Q9UGL9 99 aa4.97□□□□□ -1.61
TPM1-229ENST00000561242 KRTAP4-12Q9BQ66 201 aa4.96□□□□□ -1.62
TPM1-229ENST00000561242 SERP1Q9Y6X1 66 aa4.95□□□□□ -1.62
TPM1-229ENST00000561242 KRTAP9-9Q9BYP9 154 aa4.94□□□□□ -1.62
TPM1-229ENST00000561242 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
TPM1-229ENST00000561242 R4GN34 69 aa4.94□□□□□ -1.62
TPM1-229ENST00000561242 FSIP2Q5CZC0 6907 aa4.93□□□□□ -1.62
TPM1-229ENST00000561242 ATP5EP56381 51 aaPredicted RBP4.93□□□□□ -1.62
TPM1-229ENST00000561242 KRTAP4-8A0A0G2JLE6 195 aa4.92□□□□□ -1.62
TPM1-229ENST00000561242 COA5Q86WW8 74 aa4.92□□□□□ -1.62
TPM1-229ENST00000561242 H7BZZ5 65 aa4.91□□□□□ -1.62
TPM1-229ENST00000561242 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
TPM1-229ENST00000561242 CCDC179H3BU77 68 aa4.9□□□□□ -1.63
TPM1-229ENST00000561242 H3BS24 57 aa4.89□□□□□ -1.63
TPM1-229ENST00000561242 Q5VV11 94 aa4.89□□□□□ -1.63
TPM1-229ENST00000561242 M0QZ58 72 aa4.86□□□□□ -1.63
TPM1-229ENST00000561242 PLAC4Q8WY50 150 aa4.85□□□□□ -1.63
TPM1-229ENST00000561242 TMEM258P61165 79 aa4.84□□□□□ -1.63
TPM1-229ENST00000561242 LINC01554Q52M75 96 aa4.83□□□□□ -1.64
TPM1-229ENST00000561242 PRR15LQ9BU68 103 aa4.81□□□□□ -1.64
TPM1-229ENST00000561242 SPRR2GQ9BYE4 73 aa4.81□□□□□ -1.64
TPM1-229ENST00000561242 A0A1B0GU69 56 aa4.79□□□□□ -1.64
TPM1-229ENST00000561242 P0C880 135 aa4.79□□□□□ -1.64
TPM1-229ENST00000561242 KRTAP19-1Q8IUB9 90 aa4.79□□□□□ -1.64
TPM1-229ENST00000561242 CYSTM1Q9H1C7 97 aa4.79□□□□□ -1.64
TPM1-229ENST00000561242 KRTAP4-7Q9BYR0 210 aa4.77□□□□□ -1.65
TPM1-229ENST00000561242 A6NN06 94 aa4.73□□□□□ -1.65
TPM1-229ENST00000561242 PRO2289Q9P1D8 64 aa4.73□□□□□ -1.65
TPM1-229ENST00000561242 A0A1B0GU33 70 aa4.72□□□□□ -1.65
TPM1-229ENST00000561242 KRTAP19-8Q3LI54 63 aa4.71□□□□□ -1.66
TPM1-229ENST00000561242 KRTAP9-7A8MTY7 169 aa4.7□□□□□ -1.66
TPM1-229ENST00000561242 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
TPM1-229ENST00000561242 PCP4P48539 62 aa4.67□□□□□ -1.66
TPM1-229ENST00000561242 KRTAP19-6Q3LI70 58 aa4.67□□□□□ -1.66
TPM1-229ENST00000561242 V9GYY9 64 aa4.67□□□□□ -1.66
TPM1-229ENST00000561242 SMIM26A0A096LP01 95 aa4.66□□□□□ -1.66
TPM1-229ENST00000561242 CAMK2N1Q7Z7J9 78 aa4.64□□□□□ -1.67
TPM1-229ENST00000561242 A0A0D9SG42 100 aa4.63□□□□□ -1.67
TPM1-229ENST00000561242 MT1BP07438 61 aa4.62□□□□□ -1.67
TPM1-229ENST00000561242 SPINT4Q6UDR6 99 aa4.6□□□□□ -1.67
TPM1-229ENST00000561242 KRTAP4-9Q9BYQ8 210 aa4.6□□□□□ -1.67
TPM1-229ENST00000561242 LINC01558Q9Y6Z2 57 aa4.6□□□□□ -1.67
TPM1-229ENST00000561242 USH2AO75445 5202 aa4.58□□□□□ -1.68
TPM1-229ENST00000561242 UQCR11O14957 56 aa4.57□□□□□ -1.68
TPM1-229ENST00000561242 SPATA8Q6RVD6 105 aa4.57□□□□□ -1.68
TPM1-229ENST00000561242 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
TPM1-229ENST00000561242 KRTAP10-5P60370 271 aa4.55□□□□□ -1.68
TPM1-229ENST00000561242 K7ERS5 55 aa4.54□□□□□ -1.68
TPM1-229ENST00000561242 KRTAP13-4Q3LI77 160 aa4.49□□□□□ -1.69
TPM1-229ENST00000561242 PSPHP1O15172 72 aa4.48□□□□□ -1.69
TPM1-229ENST00000561242 RPS28P62857 69 aaKnown RBP4.48□□□□□ -1.69
TPM1-229ENST00000561242 SSPOA2VEC9 5147 aa4.48□□□□□ -1.69
TPM1-229ENST00000561242 MIR22HGQ0VDD5 57 aa4.47□□□□□ -1.69
TPM1-229ENST00000561242 Q1T7F1 81 aa4.47□□□□□ -1.69
TPM1-229ENST00000561242 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
TPM1-229ENST00000561242 FCGBPQ9Y6R7 5405 aaPredicted RBP4.43□□□□□ -1.7
TPM1-229ENST00000561242 A6NED7 52 aa4.43□□□□□ -1.7
TPM1-229ENST00000561242 A8MU10 97 aa4.42□□□□□ -1.7
TPM1-229ENST00000561242 MT1XP80297 61 aa4.41□□□□□ -1.7
TPM1-229ENST00000561242 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
TPM1-229ENST00000561242 KRTAP12-1P59990 96 aa4.38□□□□□ -1.71
TPM1-229ENST00000561242 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
TPM1-229ENST00000561242 MACF1Q9UPN3 7388 aaKnown RBP4.35□□□□□ -1.71
TPM1-229ENST00000561242 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
TPM1-229ENST00000561242 KRTAP6-3Q3LI67 103 aa4.34□□□□□ -1.71
TPM1-229ENST00000561242 LCE4AQ5TA78 99 aa4.34□□□□□ -1.71
TPM1-229ENST00000561242 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
TPM1-229ENST00000561242 TNP1P09430 55 aa4.3□□□□□ -1.72
TPM1-229ENST00000561242 KRTAP5-3Q6L8H2 238 aa4.28□□□□□ -1.72
TPM1-229ENST00000561242 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
TPM1-229ENST00000561242 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
TPM1-229ENST00000561242 KRTAP10-7P60409 375 aaPredicted RBP4.23□□□□□ -1.73
TPM1-229ENST00000561242 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
TPM1-229ENST00000561242 SPRR2FQ96RM1 72 aa4.22□□□□□ -1.73
TPM1-229ENST00000561242 CDC42SE1Q9NRR8 79 aa4.19□□□□□ -1.74
TPM1-229ENST00000561242 NEBP20929 6669 aa4.17□□□□□ -1.74
TPM1-229ENST00000561242 KRTAP5-9P26371 169 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms