RNA–Protein interactions for RNA: ENST00000561091.1

SHF-209, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5

Gene SHF, Length 577 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-209ENST00000561091 LCA10Q71F78 164 aa7.69□□□□□ -1.18
SHF-209ENST00000561091 DMAC1Q96GE9 116 aa7.69□□□□□ -1.18
SHF-209ENST00000561091 CYSTM1Q9H1C7 97 aa7.68□□□□□ -1.18
SHF-209ENST00000561091 CCDC179H3BU77 68 aa7.65□□□□□ -1.18
SHF-209ENST00000561091 SPANXA2-OT1Q8N9U9 137 aa7.62□□□□□ -1.19
SHF-209ENST00000561091 KRTAP9-8Q9BYQ0 159 aa7.61□□□□□ -1.19
SHF-209ENST00000561091 H7BZZ5 65 aa7.6□□□□□ -1.19
SHF-209ENST00000561091 NDUFC1O43677 76 aa7.59□□□□□ -1.19
SHF-209ENST00000561091 CSAG1Q6PB30 78 aa7.58□□□□□ -1.2
SHF-209ENST00000561091 ACYP2P14621 99 aa7.57□□□□□ -1.2
SHF-209ENST00000561091 MT2AP02795 61 aa7.56□□□□□ -1.2
SHF-209ENST00000561091 MT1FP04733 61 aa7.51□□□□□ -1.21
SHF-209ENST00000561091 KRTAP10-10P60014 251 aa7.48□□□□□ -1.21
SHF-209ENST00000561091 CHKB-CPT1BH3BT56 60 aa7.45□□□□□ -1.22
SHF-209ENST00000561091 COA5Q86WW8 74 aa7.42□□□□□ -1.22
SHF-209ENST00000561091 SPTSSBQ8NFR3 76 aa7.37□□□□□ -1.23
SHF-209ENST00000561091 H0YAA0 97 aa7.35□□□□□ -1.23
SHF-209ENST00000561091 KRTAP9-3Q9BYQ3 159 aa7.35□□□□□ -1.23
SHF-209ENST00000561091 ATP5EP56381 51 aaPredicted RBP7.34□□□□□ -1.23
SHF-209ENST00000561091 TMEM258P61165 79 aa7.34□□□□□ -1.23
SHF-209ENST00000561091 ADM2Q7Z4H4 148 aa7.34□□□□□ -1.23
SHF-209ENST00000561091 KRTAP9-2Q9BYQ4 174 aa7.34□□□□□ -1.23
SHF-209ENST00000561091 PCP4P48539 62 aa7.33□□□□□ -1.24
SHF-209ENST00000561091 P0C880 135 aa7.25□□□□□ -1.25
SHF-209ENST00000561091 KRTAP19-1Q8IUB9 90 aa7.21□□□□□ -1.26
SHF-209ENST00000561091 CRIPTQ9P021 101 aa7.17□□□□□ -1.26
SHF-209ENST00000561091 SPRR2GQ9BYE4 73 aa7.16□□□□□ -1.26
SHF-209ENST00000561091 SERP1Q9Y6X1 66 aa7.12□□□□□ -1.27
SHF-209ENST00000561091 M0QZ58 72 aa7.08□□□□□ -1.28
SHF-209ENST00000561091 R4GN34 69 aa7.08□□□□□ -1.28
SHF-209ENST00000561091 SEC61GP60059 68 aa7.07□□□□□ -1.28
SHF-209ENST00000561091 KRTAP19-8Q3LI54 63 aa7.05□□□□□ -1.28
SHF-209ENST00000561091 A0A1B0GU69 56 aa7.01□□□□□ -1.29
SHF-209ENST00000561091 MT1BP07438 61 aa7.01□□□□□ -1.29
SHF-209ENST00000561091 Q5VV11 94 aa7.01□□□□□ -1.29
SHF-209ENST00000561091 CRCT1Q9UGL9 99 aa7.01□□□□□ -1.29
SHF-209ENST00000561091 LINC01558Q9Y6Z2 57 aa6.98□□□□□ -1.29
SHF-209ENST00000561091 KRTAP13-4Q3LI77 160 aa6.97□□□□□ -1.29
SHF-209ENST00000561091 LINC01554Q52M75 96 aa6.97□□□□□ -1.29
SHF-209ENST00000561091 USH2AO75445 5202 aa6.94□□□□□ -1.3
SHF-209ENST00000561091 KRTAP9-6A0A140TA67 174 aa6.94□□□□□ -1.3
SHF-209ENST00000561091 A0A1B0GU33 70 aa6.93□□□□□ -1.3
SHF-209ENST00000561091 PRR15LQ9BU68 103 aa6.91□□□□□ -1.3
SHF-209ENST00000561091 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
SHF-209ENST00000561091 RPS28P62857 69 aaKnown RBP6.88□□□□□ -1.31
SHF-209ENST00000561091 SPATA8Q6RVD6 105 aa6.88□□□□□ -1.31
SHF-209ENST00000561091 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
SHF-209ENST00000561091 FSIP2Q5CZC0 6907 aa6.87□□□□□ -1.31
SHF-209ENST00000561091 SMIM26A0A096LP01 95 aa6.87□□□□□ -1.31
SHF-209ENST00000561091 KRTAP19-6Q3LI70 58 aa6.87□□□□□ -1.31
SHF-209ENST00000561091 Q1T7F1 81 aa6.83□□□□□ -1.32
SHF-209ENST00000561091 PLAC4Q8WY50 150 aa6.83□□□□□ -1.32
SHF-209ENST00000561091 V9GYY9 64 aa6.82□□□□□ -1.32
SHF-209ENST00000561091 A0A0D9SG42 100 aa6.81□□□□□ -1.32
SHF-209ENST00000561091 SSPOA2VEC9 5147 aa6.78□□□□□ -1.32
SHF-209ENST00000561091 PSPHP1O15172 72 aa6.78□□□□□ -1.32
SHF-209ENST00000561091 A6NN06 94 aa6.76□□□□□ -1.33
SHF-209ENST00000561091 KRTAP10-5P60370 271 aa6.74□□□□□ -1.33
SHF-209ENST00000561091 A8MU10 97 aa6.73□□□□□ -1.33
SHF-209ENST00000561091 UQCR11O14957 56 aa6.7□□□□□ -1.34
SHF-209ENST00000561091 KRTAP19-4Q3LI73 84 aa6.69□□□□□ -1.34
SHF-209ENST00000561091 MT1XP80297 61 aa6.68□□□□□ -1.34
SHF-209ENST00000561091 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
SHF-209ENST00000561091 SPINT4Q6UDR6 99 aa6.66□□□□□ -1.34
SHF-209ENST00000561091 KRTAP12-2P59991 146 aa6.63□□□□□ -1.35
SHF-209ENST00000561091 PRO2289Q9P1D8 64 aa6.62□□□□□ -1.35
SHF-209ENST00000561091 MIR22HGQ0VDD5 57 aa6.61□□□□□ -1.35
SHF-209ENST00000561091 FCGBPQ9Y6R7 5405 aaPredicted RBP6.61□□□□□ -1.35
SHF-209ENST00000561091 CAMK2N1Q7Z7J9 78 aa6.6□□□□□ -1.35
SHF-209ENST00000561091 A6NED7 52 aa6.56□□□□□ -1.36
SHF-209ENST00000561091 KRTAP4-8Q9BYQ9 185 aa6.52□□□□□ -1.37
SHF-209ENST00000561091 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.51□□□□□ -1.37
SHF-209ENST00000561091 SVIPQ8NHG7 77 aa6.47□□□□□ -1.37
SHF-209ENST00000561091 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
SHF-209ENST00000561091 KRTAP4-12Q9BQ66 201 aa6.45□□□□□ -1.38
SHF-209ENST00000561091 KRTAP10-7P60409 375 aaPredicted RBP6.4□□□□□ -1.38
SHF-209ENST00000561091 K7ERS5 55 aa6.36□□□□□ -1.39
SHF-209ENST00000561091 CDC42SE1Q9NRR8 79 aa6.36□□□□□ -1.39
SHF-209ENST00000561091 C10orf95Q9H7T3 257 aa6.34□□□□□ -1.39
SHF-209ENST00000561091 KRTAP10-12P60413 245 aa6.33□□□□□ -1.4
SHF-209ENST00000561091 KRTAP9-7A8MTY7 169 aa6.29□□□□□ -1.4
SHF-209ENST00000561091 MACF1Q9UPN3 7388 aaKnown RBP6.28□□□□□ -1.4
SHF-209ENST00000561091 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
SHF-209ENST00000561091 LCE3BQ5TA77 95 aa6.26□□□□□ -1.41
SHF-209ENST00000561091 KRTAP6-3Q3LI67 103 aa6.22□□□□□ -1.41
SHF-209ENST00000561091 KRTAP8-1Q8IUC2 63 aa6.2□□□□□ -1.42
SHF-209ENST00000561091 TNP1P09430 55 aa6.19□□□□□ -1.42
SHF-209ENST00000561091 LCE4AQ5TA78 99 aa6.17□□□□□ -1.42
SHF-209ENST00000561091 BRK1Q8WUW1 75 aa6.17□□□□□ -1.42
SHF-209ENST00000561091 KRTAP5-9P26371 169 aa6.12□□□□□ -1.43
SHF-209ENST00000561091 KMT2DO14686 5537 aa6.1□□□□□ -1.43
SHF-209ENST00000561091 SYNE2Q8WXH0 6885 aaKnown RBP6.08□□□□□ -1.44
SHF-209ENST00000561091 SPRR2FQ96RM1 72 aa6.08□□□□□ -1.44
SHF-209ENST00000561091 KRTAP25-1Q3LHN0 102 aa6.06□□□□□ -1.44
SHF-209ENST00000561091 KRTAP9-9Q9BYP9 154 aa6.06□□□□□ -1.44
SHF-209ENST00000561091 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
SHF-209ENST00000561091 ROMO1P60602 79 aa6.05□□□□□ -1.44
SHF-209ENST00000561091 LCE3AQ5TA76 89 aa6.05□□□□□ -1.44
SHF-209ENST00000561091 KRTAP19-7Q3SYF9 63 aa5.96□□□□□ -1.46
SHF-209ENST00000561091 KRTAP19-5Q3LI72 72 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms