RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 KRTAP4-6Q9BYQ5 205 aa7.36□□□□□ -1.23
ZEB1-218ENST00000560196 Q1T7F1 81 aa7.33□□□□□ -1.24
ZEB1-218ENST00000560196 RBM12B-AS1Q9P1G2 102 aa7.33□□□□□ -1.24
ZEB1-218ENST00000560196 V9GYY9 64 aa7.32□□□□□ -1.24
ZEB1-218ENST00000560196 KRTAP4-1Q9BYQ7 146 aa7.31□□□□□ -1.24
ZEB1-218ENST00000560196 SPTSSBQ8NFR3 76 aa7.29□□□□□ -1.24
ZEB1-218ENST00000560196 H1FX-AS1Q4G0G2 97 aa7.28□□□□□ -1.24
ZEB1-218ENST00000560196 HMCN2Q8NDA2 5059 aa7.28□□□□□ -1.24
ZEB1-218ENST00000560196 HERC1Q15751 4861 aa7.26□□□□□ -1.25
ZEB1-218ENST00000560196 LINC01558Q9Y6Z2 57 aa7.26□□□□□ -1.25
ZEB1-218ENST00000560196 S4R3F8 94 aa7.21□□□□□ -1.26
ZEB1-218ENST00000560196 KRTAP19-2Q3LHN2 52 aa7.17□□□□□ -1.26
ZEB1-218ENST00000560196 LCA10Q71F78 164 aa7.17□□□□□ -1.26
ZEB1-218ENST00000560196 PRR15LQ9BU68 103 aa7.13□□□□□ -1.27
ZEB1-218ENST00000560196 PSPHP1O15172 72 aa7.12□□□□□ -1.27
ZEB1-218ENST00000560196 Q5VV11 94 aa7.11□□□□□ -1.27
ZEB1-218ENST00000560196 A0A1B0GU69 56 aa7.09□□□□□ -1.27
ZEB1-218ENST00000560196 SEC61GP60059 68 aa7.06□□□□□ -1.28
ZEB1-218ENST00000560196 CSAG1Q6PB30 78 aa7.06□□□□□ -1.28
ZEB1-218ENST00000560196 H0YAA0 97 aa6.96□□□□□ -1.3
ZEB1-218ENST00000560196 A6NED7 52 aa6.93□□□□□ -1.3
ZEB1-218ENST00000560196 KRTAP10-6P60371 365 aaPredicted RBP6.92□□□□□ -1.3
ZEB1-218ENST00000560196 UQCR11O14957 56 aa6.91□□□□□ -1.3
ZEB1-218ENST00000560196 FLGP20930 4061 aaPredicted RBP6.91□□□□□ -1.3
ZEB1-218ENST00000560196 A0A1B0GU33 70 aa6.89□□□□□ -1.31
ZEB1-218ENST00000560196 H3BS24 57 aa6.88□□□□□ -1.31
ZEB1-218ENST00000560196 ADM2Q7Z4H4 148 aa6.88□□□□□ -1.31
ZEB1-218ENST00000560196 KRTAP4-8Q9BYQ9 185 aa6.86□□□□□ -1.31
ZEB1-218ENST00000560196 RNF213Q63HN8 5207 aa6.86□□□□□ -1.31
ZEB1-218ENST00000560196 BRK1Q8WUW1 75 aa6.85□□□□□ -1.31
ZEB1-218ENST00000560196 CDC42SE1Q9NRR8 79 aa6.85□□□□□ -1.31
ZEB1-218ENST00000560196 P0C880 135 aa6.84□□□□□ -1.31
ZEB1-218ENST00000560196 SPATA8Q6RVD6 105 aa6.84□□□□□ -1.31
ZEB1-218ENST00000560196 MUC2Q02817 5179 aa6.83□□□□□ -1.32
ZEB1-218ENST00000560196 UBR4Q5T4S7 5183 aa6.82□□□□□ -1.32
ZEB1-218ENST00000560196 MT1HP80294 61 aa6.81□□□□□ -1.32
ZEB1-218ENST00000560196 MIR22HGQ0VDD5 57 aa6.81□□□□□ -1.32
ZEB1-218ENST00000560196 PRO0628Q9UI54 55 aa6.76□□□□□ -1.33
ZEB1-218ENST00000560196 A8MU10 97 aa6.74□□□□□ -1.33
ZEB1-218ENST00000560196 M0QZ58 72 aa6.73□□□□□ -1.33
ZEB1-218ENST00000560196 KRTAP9-2Q9BYQ4 174 aa6.73□□□□□ -1.33
ZEB1-218ENST00000560196 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.71□□□□□ -1.34
ZEB1-218ENST00000560196 M0R2T5 61 aa6.71□□□□□ -1.34
ZEB1-218ENST00000560196 KRTAP13-4Q3LI77 160 aa6.71□□□□□ -1.34
ZEB1-218ENST00000560196 KRTAP4-12Q9BQ66 201 aa6.69□□□□□ -1.34
ZEB1-218ENST00000560196 KRTAP9-6A0A140TA67 174 aa6.68□□□□□ -1.34
ZEB1-218ENST00000560196 FAT4Q6V0I7 4981 aa6.67□□□□□ -1.34
ZEB1-218ENST00000560196 KRTAP19-1Q8IUB9 90 aa6.65□□□□□ -1.34
ZEB1-218ENST00000560196 CRIPTQ9P021 101 aa6.64□□□□□ -1.35
ZEB1-218ENST00000560196 R4GN34 69 aa6.63□□□□□ -1.35
ZEB1-218ENST00000560196 KRTAP9-8Q9BYQ0 159 aa6.58□□□□□ -1.36
ZEB1-218ENST00000560196 MT2AP02795 61 aa6.56□□□□□ -1.36
ZEB1-218ENST00000560196 A0A0D9SG42 100 aa6.55□□□□□ -1.36
ZEB1-218ENST00000560196 LCE3BQ5TA77 95 aa6.53□□□□□ -1.36
ZEB1-218ENST00000560196 K7ERS5 55 aa6.52□□□□□ -1.37
ZEB1-218ENST00000560196 MT1FP04733 61 aa6.51□□□□□ -1.37
ZEB1-218ENST00000560196 A6NN06 94 aa6.49□□□□□ -1.37
ZEB1-218ENST00000560196 KRTAP10-10P60014 251 aa6.49□□□□□ -1.37
ZEB1-218ENST00000560196 PMAIP1Q13794 54 aa6.49□□□□□ -1.37
ZEB1-218ENST00000560196 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
ZEB1-218ENST00000560196 SPRR2GQ9BYE4 73 aa6.48□□□□□ -1.37
ZEB1-218ENST00000560196 LINC01554Q52M75 96 aa6.46□□□□□ -1.38
ZEB1-218ENST00000560196 KRTAP12-2P59991 146 aa6.44□□□□□ -1.38
ZEB1-218ENST00000560196 KRTAP19-4Q3LI73 84 aa6.41□□□□□ -1.38
ZEB1-218ENST00000560196 SPINT4Q6UDR6 99 aa6.41□□□□□ -1.38
ZEB1-218ENST00000560196 KRTAP9-9Q9BYP9 154 aa6.4□□□□□ -1.38
ZEB1-218ENST00000560196 KRTAP9-4Q9BYQ2 154 aa6.4□□□□□ -1.38
ZEB1-218ENST00000560196 KRTAP9-3Q9BYQ3 159 aa6.35□□□□□ -1.39
ZEB1-218ENST00000560196 KRTAP19-8Q3LI54 63 aa6.32□□□□□ -1.4
ZEB1-218ENST00000560196 KTN1-AS1Q86SY8 53 aa6.26□□□□□ -1.41
ZEB1-218ENST00000560196 ROMO1P60602 79 aa6.25□□□□□ -1.41
ZEB1-218ENST00000560196 SVIPQ8NHG7 77 aa6.25□□□□□ -1.41
ZEB1-218ENST00000560196 KRTAP4-8A0A0G2JLE6 195 aa6.24□□□□□ -1.41
ZEB1-218ENST00000560196 PLAC4Q8WY50 150 aa6.24□□□□□ -1.41
ZEB1-218ENST00000560196 CAMK2N1Q7Z7J9 78 aa6.21□□□□□ -1.42
ZEB1-218ENST00000560196 MT1BP07438 61 aa6.2□□□□□ -1.42
ZEB1-218ENST00000560196 LCE4AQ5TA78 99 aa6.19□□□□□ -1.42
ZEB1-218ENST00000560196 LCE1DQ5T752 114 aa6.14□□□□□ -1.43
ZEB1-218ENST00000560196 KRTAP9-7A8MTY7 169 aa6.13□□□□□ -1.43
ZEB1-218ENST00000560196 C10orf95Q9H7T3 257 aa6.13□□□□□ -1.43
ZEB1-218ENST00000560196 PRAC1Q96KF2 57 aa6.05□□□□□ -1.44
ZEB1-218ENST00000560196 KRTAP25-1Q3LHN0 102 aa6.02□□□□□ -1.45
ZEB1-218ENST00000560196 KRTAP4-7Q9BYR0 210 aa6.01□□□□□ -1.45
ZEB1-218ENST00000560196 MT1XP80297 61 aa5.99□□□□□ -1.45
ZEB1-218ENST00000560196 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
ZEB1-218ENST00000560196 TNP1P09430 55 aa5.95□□□□□ -1.46
ZEB1-218ENST00000560196 PRO2289Q9P1D8 64 aa5.95□□□□□ -1.46
ZEB1-218ENST00000560196 KRTAP4-9Q9BYQ8 210 aa5.94□□□□□ -1.46
ZEB1-218ENST00000560196 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
ZEB1-218ENST00000560196 LCE5AQ5TCM9 118 aa5.84□□□□□ -1.47
ZEB1-218ENST00000560196 USH2AO75445 5202 aa5.83□□□□□ -1.48
ZEB1-218ENST00000560196 PP632Q6XCG6 107 aa5.82□□□□□ -1.48
ZEB1-218ENST00000560196 KRTAP19-6Q3LI70 58 aa5.8□□□□□ -1.48
ZEB1-218ENST00000560196 KRTAP4-11Q9BYQ6 195 aa5.76□□□□□ -1.49
ZEB1-218ENST00000560196 KRTAP4-2Q9BYR5 136 aa5.75□□□□□ -1.49
ZEB1-218ENST00000560196 KRTAP10-7P60409 375 aaPredicted RBP5.72□□□□□ -1.49
ZEB1-218ENST00000560196 KRTAP10-12P60413 245 aa5.7□□□□□ -1.5
ZEB1-218ENST00000560196 LCE3AQ5TA76 89 aa5.66□□□□□ -1.5
ZEB1-218ENST00000560196 SSPOA2VEC9 5147 aa5.66□□□□□ -1.5
ZEB1-218ENST00000560196 KRTAP8-1Q8IUC2 63 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms