RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 LINC01558Q9Y6Z2 57 aa6.45□□□□□ -1.38
USP3-213ENST00000559711 HMCN2Q8NDA2 5059 aa6.41□□□□□ -1.38
USP3-213ENST00000559711 MUC17Q685J3 4493 aa6.41□□□□□ -1.38
USP3-213ENST00000559711 PSPHP1O15172 72 aa6.4□□□□□ -1.38
USP3-213ENST00000559711 SPTSSBQ8NFR3 76 aa6.4□□□□□ -1.38
USP3-213ENST00000559711 RBM12B-AS1Q9P1G2 102 aa6.39□□□□□ -1.39
USP3-213ENST00000559711 KRTAP4-1Q9BYQ7 146 aa6.39□□□□□ -1.39
USP3-213ENST00000559711 H1FX-AS1Q4G0G2 97 aa6.38□□□□□ -1.39
USP3-213ENST00000559711 PRR15LQ9BU68 103 aa6.38□□□□□ -1.39
USP3-213ENST00000559711 Q5VV11 94 aa6.37□□□□□ -1.39
USP3-213ENST00000559711 LCA10Q71F78 164 aa6.33□□□□□ -1.4
USP3-213ENST00000559711 S4R3F8 94 aa6.33□□□□□ -1.4
USP3-213ENST00000559711 A0A1B0GU69 56 aa6.3□□□□□ -1.4
USP3-213ENST00000559711 LCE2CQ5TA81 110 aa6.29□□□□□ -1.4
USP3-213ENST00000559711 KRTAP19-2Q3LHN2 52 aa6.26□□□□□ -1.41
USP3-213ENST00000559711 SEC61GP60059 68 aa6.24□□□□□ -1.41
USP3-213ENST00000559711 A6NED7 52 aa6.2□□□□□ -1.42
USP3-213ENST00000559711 LORP23490 312 aaPredicted RBP6.2□□□□□ -1.42
USP3-213ENST00000559711 CSAG1Q6PB30 78 aa6.19□□□□□ -1.42
USP3-213ENST00000559711 BRK1Q8WUW1 75 aa6.19□□□□□ -1.42
USP3-213ENST00000559711 MUC2Q02817 5179 aa6.18□□□□□ -1.42
USP3-213ENST00000559711 UQCR11O14957 56 aa6.14□□□□□ -1.43
USP3-213ENST00000559711 KRTAP10-6P60371 365 aaPredicted RBP6.13□□□□□ -1.43
USP3-213ENST00000559711 CDC42SE1Q9NRR8 79 aa6.13□□□□□ -1.43
USP3-213ENST00000559711 PRO0628Q9UI54 55 aa6.12□□□□□ -1.43
USP3-213ENST00000559711 A0A1B0GU33 70 aa6.1□□□□□ -1.43
USP3-213ENST00000559711 A8MU10 97 aa6.1□□□□□ -1.43
USP3-213ENST00000559711 SPATA8Q6RVD6 105 aa6.1□□□□□ -1.43
USP3-213ENST00000559711 FLGP20930 4061 aaPredicted RBP6.1□□□□□ -1.43
USP3-213ENST00000559711 H0YAA0 97 aa6.09□□□□□ -1.43
USP3-213ENST00000559711 MIR22HGQ0VDD5 57 aa6.07□□□□□ -1.44
USP3-213ENST00000559711 ADM2Q7Z4H4 148 aa6.06□□□□□ -1.44
USP3-213ENST00000559711 UBR4Q5T4S7 5183 aa6.06□□□□□ -1.44
USP3-213ENST00000559711 P0C880 135 aa6.05□□□□□ -1.44
USP3-213ENST00000559711 RNF213Q63HN8 5207 aa6.03□□□□□ -1.44
USP3-213ENST00000559711 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
USP3-213ENST00000559711 KRTAP13-4Q3LI77 160 aa5.96□□□□□ -1.46
USP3-213ENST00000559711 FAT4Q6V0I7 4981 aa5.92□□□□□ -1.46
USP3-213ENST00000559711 M0QZ58 72 aa5.91□□□□□ -1.46
USP3-213ENST00000559711 MT1HP80294 61 aa5.91□□□□□ -1.46
USP3-213ENST00000559711 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.87□□□□□ -1.47
USP3-213ENST00000559711 PMAIP1Q13794 54 aa5.87□□□□□ -1.47
USP3-213ENST00000559711 KRTAP9-2Q9BYQ4 174 aa5.85□□□□□ -1.47
USP3-213ENST00000559711 A6NN06 94 aa5.84□□□□□ -1.47
USP3-213ENST00000559711 M0R2T5 61 aa5.83□□□□□ -1.48
USP3-213ENST00000559711 R4GN34 69 aa5.83□□□□□ -1.48
USP3-213ENST00000559711 A0A0D9SG42 100 aa5.82□□□□□ -1.48
USP3-213ENST00000559711 KRTAP9-6A0A140TA67 174 aa5.82□□□□□ -1.48
USP3-213ENST00000559711 SVIPQ8NHG7 77 aa5.79□□□□□ -1.48
USP3-213ENST00000559711 CRIPTQ9P021 101 aa5.79□□□□□ -1.48
USP3-213ENST00000559711 K7ERS5 55 aa5.77□□□□□ -1.49
USP3-213ENST00000559711 KRTAP12-1P59990 96 aa5.74□□□□□ -1.49
USP3-213ENST00000559711 KRTAP9-8Q9BYQ0 159 aa5.73□□□□□ -1.49
USP3-213ENST00000559711 KRTAP12-2P59991 146 aa5.72□□□□□ -1.49
USP3-213ENST00000559711 MT2AP02795 61 aa5.71□□□□□ -1.5
USP3-213ENST00000559711 LINC01554Q52M75 96 aa5.71□□□□□ -1.5
USP3-213ENST00000559711 SPINT4Q6UDR6 99 aa5.68□□□□□ -1.5
USP3-213ENST00000559711 MT1FP04733 61 aa5.67□□□□□ -1.5
USP3-213ENST00000559711 KRTAP4-8A0A0G2JLE6 195 aa5.66□□□□□ -1.5
USP3-213ENST00000559711 KRTAP10-10P60014 251 aa5.66□□□□□ -1.5
USP3-213ENST00000559711 LCE3BQ5TA77 95 aa5.66□□□□□ -1.5
USP3-213ENST00000559711 KTN1-AS1Q86SY8 53 aa5.65□□□□□ -1.51
USP3-213ENST00000559711 SPRR2GQ9BYE4 73 aa5.65□□□□□ -1.51
USP3-213ENST00000559711 KRTAP19-1Q8IUB9 90 aa5.63□□□□□ -1.51
USP3-213ENST00000559711 ROMO1P60602 79 aa5.56□□□□□ -1.52
USP3-213ENST00000559711 KRTAP9-9Q9BYP9 154 aa5.54□□□□□ -1.52
USP3-213ENST00000559711 KRTAP9-4Q9BYQ2 154 aa5.54□□□□□ -1.52
USP3-213ENST00000559711 KRTAP9-3Q9BYQ3 159 aa5.53□□□□□ -1.52
USP3-213ENST00000559711 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
USP3-213ENST00000559711 KRTAP4-12Q9BQ66 201 aa5.5□□□□□ -1.53
USP3-213ENST00000559711 KRTAP19-8Q3LI54 63 aa5.5□□□□□ -1.53
USP3-213ENST00000559711 PRAC1Q96KF2 57 aa5.48□□□□□ -1.53
USP3-213ENST00000559711 CAMK2N1Q7Z7J9 78 aa5.47□□□□□ -1.53
USP3-213ENST00000559711 PLAC4Q8WY50 150 aa5.45□□□□□ -1.54
USP3-213ENST00000559711 C10orf95Q9H7T3 257 aa5.43□□□□□ -1.54
USP3-213ENST00000559711 MT1BP07438 61 aa5.4□□□□□ -1.54
USP3-213ENST00000559711 KRTAP25-1Q3LHN0 102 aa5.36□□□□□ -1.55
USP3-213ENST00000559711 LCE1DQ5T752 114 aa5.31□□□□□ -1.56
USP3-213ENST00000559711 KRTAP5-3Q6L8H2 238 aa5.3□□□□□ -1.56
USP3-213ENST00000559711 KRTAP4-2Q9BYR5 136 aa5.25□□□□□ -1.57
USP3-213ENST00000559711 MT1XP80297 61 aa5.24□□□□□ -1.57
USP3-213ENST00000559711 KRTAP10-5P60370 271 aa5.24□□□□□ -1.57
USP3-213ENST00000559711 KRTAP4-9Q9BYQ8 210 aa5.24□□□□□ -1.57
USP3-213ENST00000559711 TNP1P09430 55 aa5.23□□□□□ -1.57
USP3-213ENST00000559711 PRO2289Q9P1D8 64 aa5.16□□□□□ -1.58
USP3-213ENST00000559711 USH2AO75445 5202 aa5.15□□□□□ -1.59
USP3-213ENST00000559711 KRTAP23-1A1A580 65 aa5.14□□□□□ -1.59
USP3-213ENST00000559711 PP632Q6XCG6 107 aa5.14□□□□□ -1.59
USP3-213ENST00000559711 KRTAP10-7P60409 375 aaPredicted RBP5.03□□□□□ -1.6
USP3-213ENST00000559711 KRTAP19-6Q3LI70 58 aa5□□□□□ -1.61
USP3-213ENST00000559711 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
USP3-213ENST00000559711 KRTAP10-12P60413 245 aa4.99□□□□□ -1.61
USP3-213ENST00000559711 SSPOA2VEC9 5147 aa4.98□□□□□ -1.61
USP3-213ENST00000559711 KRTAP8-1Q8IUC2 63 aa4.92□□□□□ -1.62
USP3-213ENST00000559711 KRTAP4-11Q9BYQ6 195 aa4.92□□□□□ -1.62
USP3-213ENST00000559711 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
USP3-213ENST00000559711 FSIP2Q5CZC0 6907 aa4.8□□□□□ -1.64
USP3-213ENST00000559711 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
USP3-213ENST00000559711 KRTAP19-5Q3LI72 72 aa4.75□□□□□ -1.65
USP3-213ENST00000559711 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms