RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 SERP1Q9Y6X1 66 aa7.08□□□□□ -1.28
TMED3-205ENST00000558562 HRES1P13985 223 aa7.07□□□□□ -1.28
TMED3-205ENST00000558562 RPS28P62857 69 aaKnown RBP7.04□□□□□ -1.28
TMED3-205ENST00000558562 SPINK7P58062 85 aa7.02□□□□□ -1.29
TMED3-205ENST00000558562 FLGP20930 4061 aaPredicted RBP7.02□□□□□ -1.29
TMED3-205ENST00000558562 SSPOA2VEC9 5147 aa6.98□□□□□ -1.29
TMED3-205ENST00000558562 DMAC1Q96GE9 116 aa6.98□□□□□ -1.29
TMED3-205ENST00000558562 USH2AO75445 5202 aa6.98□□□□□ -1.29
TMED3-205ENST00000558562 COX6B2Q6YFQ2 88 aa6.97□□□□□ -1.29
TMED3-205ENST00000558562 COA5Q86WW8 74 aa6.95□□□□□ -1.3
TMED3-205ENST00000558562 ACYP2P14621 99 aa6.94□□□□□ -1.3
TMED3-205ENST00000558562 C4orf26Q17RF5 130 aa6.94□□□□□ -1.3
TMED3-205ENST00000558562 A8MUN3 132 aa6.9□□□□□ -1.3
TMED3-205ENST00000558562 SMIM26A0A096LP01 95 aa6.89□□□□□ -1.31
TMED3-205ENST00000558562 FCGBPQ9Y6R7 5405 aaPredicted RBP6.87□□□□□ -1.31
TMED3-205ENST00000558562 CHKB-CPT1BH3BT56 60 aa6.86□□□□□ -1.31
TMED3-205ENST00000558562 KRTAP3-1Q9BYR8 98 aa6.82□□□□□ -1.32
TMED3-205ENST00000558562 MPLKIPQ8TAP9 179 aa6.78□□□□□ -1.32
TMED3-205ENST00000558562 KRTAP9-8Q9BYQ0 159 aa6.78□□□□□ -1.32
TMED3-205ENST00000558562 SYNE2Q8WXH0 6885 aaKnown RBP6.77□□□□□ -1.33
TMED3-205ENST00000558562 RBM12B-AS1Q9P1G2 102 aa6.76□□□□□ -1.33
TMED3-205ENST00000558562 MACF1Q9UPN3 7388 aaKnown RBP6.75□□□□□ -1.33
TMED3-205ENST00000558562 Q1T7F1 81 aa6.74□□□□□ -1.33
TMED3-205ENST00000558562 KRTAP19-1Q8IUB9 90 aa6.74□□□□□ -1.33
TMED3-205ENST00000558562 V9GYY9 64 aa6.73□□□□□ -1.33
TMED3-205ENST00000558562 SPTSSBQ8NFR3 76 aa6.71□□□□□ -1.34
TMED3-205ENST00000558562 H1FX-AS1Q4G0G2 97 aa6.69□□□□□ -1.34
TMED3-205ENST00000558562 LCE2BO14633 110 aa6.67□□□□□ -1.34
TMED3-205ENST00000558562 LINC01558Q9Y6Z2 57 aa6.67□□□□□ -1.34
TMED3-205ENST00000558562 S4R3F8 94 aa6.67□□□□□ -1.34
TMED3-205ENST00000558562 PRR15LQ9BU68 103 aa6.65□□□□□ -1.34
TMED3-205ENST00000558562 MT2AP02795 61 aa6.64□□□□□ -1.35
TMED3-205ENST00000558562 PSPHP1O15172 72 aa6.62□□□□□ -1.35
TMED3-205ENST00000558562 LCA10Q71F78 164 aa6.62□□□□□ -1.35
TMED3-205ENST00000558562 SEC61GP60059 68 aa6.6□□□□□ -1.35
TMED3-205ENST00000558562 MT1FP04733 61 aa6.59□□□□□ -1.35
TMED3-205ENST00000558562 KRTAP3-3Q9BYR6 98 aa6.58□□□□□ -1.36
TMED3-205ENST00000558562 A0A1B0GU69 56 aa6.57□□□□□ -1.36
TMED3-205ENST00000558562 Q5VV11 94 aa6.57□□□□□ -1.36
TMED3-205ENST00000558562 KRTAP9-3Q9BYQ3 159 aa6.57□□□□□ -1.36
TMED3-205ENST00000558562 KRTAP10-10P60014 251 aa6.54□□□□□ -1.36
TMED3-205ENST00000558562 CSAG1Q6PB30 78 aa6.49□□□□□ -1.37
TMED3-205ENST00000558562 KRTAP19-6Q3LI70 58 aa6.46□□□□□ -1.38
TMED3-205ENST00000558562 KRTAP6-3Q3LI67 103 aa6.45□□□□□ -1.38
TMED3-205ENST00000558562 A6NED7 52 aa6.44□□□□□ -1.38
TMED3-205ENST00000558562 BRK1Q8WUW1 75 aa6.39□□□□□ -1.39
TMED3-205ENST00000558562 NEBP20929 6669 aa6.37□□□□□ -1.39
TMED3-205ENST00000558562 UQCR11O14957 56 aa6.36□□□□□ -1.39
TMED3-205ENST00000558562 ADM2Q7Z4H4 148 aa6.36□□□□□ -1.39
TMED3-205ENST00000558562 KRTAP3-2Q9BYR7 98 aa6.36□□□□□ -1.39
TMED3-205ENST00000558562 A0A1B0GU33 70 aa6.35□□□□□ -1.39
TMED3-205ENST00000558562 H0YAA0 97 aa6.35□□□□□ -1.39
TMED3-205ENST00000558562 CDC42SE1Q9NRR8 79 aa6.32□□□□□ -1.4
TMED3-205ENST00000558562 P0C880 135 aa6.31□□□□□ -1.4
TMED3-205ENST00000558562 MIR22HGQ0VDD5 57 aa6.31□□□□□ -1.4
TMED3-205ENST00000558562 SPATA8Q6RVD6 105 aa6.28□□□□□ -1.4
TMED3-205ENST00000558562 MUC12Q9UKN1 5478 aa6.28□□□□□ -1.4
TMED3-205ENST00000558562 A8MU10 97 aa6.27□□□□□ -1.41
TMED3-205ENST00000558562 PRO0628Q9UI54 55 aa6.24□□□□□ -1.41
TMED3-205ENST00000558562 KRTAP20-1Q3LI63 56 aa6.21□□□□□ -1.42
TMED3-205ENST00000558562 KRTAP13-4Q3LI77 160 aa6.19□□□□□ -1.42
TMED3-205ENST00000558562 M0QZ58 72 aa6.16□□□□□ -1.42
TMED3-205ENST00000558562 R4GN34 69 aa6.12□□□□□ -1.43
TMED3-205ENST00000558562 A0A0D9SG42 100 aa6.11□□□□□ -1.43
TMED3-205ENST00000558562 CRIPTQ9P021 101 aa6.07□□□□□ -1.44
TMED3-205ENST00000558562 MDN1Q9NU22 5596 aa6.03□□□□□ -1.44
TMED3-205ENST00000558562 A6NN06 94 aa6.03□□□□□ -1.44
TMED3-205ENST00000558562 K7ERS5 55 aa6.03□□□□□ -1.44
TMED3-205ENST00000558562 LINC01554Q52M75 96 aa6.03□□□□□ -1.44
TMED3-205ENST00000558562 PMAIP1Q13794 54 aa6.02□□□□□ -1.45
TMED3-205ENST00000558562 KMT2DO14686 5537 aa6.01□□□□□ -1.45
TMED3-205ENST00000558562 H3BS24 57 aa5.99□□□□□ -1.45
TMED3-205ENST00000558562 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
TMED3-205ENST00000558562 SPINT4Q6UDR6 99 aa5.96□□□□□ -1.46
TMED3-205ENST00000558562 KRTAP5-9P26371 169 aa5.95□□□□□ -1.46
TMED3-205ENST00000558562 KRTAP12-2P59991 146 aa5.95□□□□□ -1.46
TMED3-205ENST00000558562 MT1BP07438 61 aa5.92□□□□□ -1.46
TMED3-205ENST00000558562 KRTAP2-3P0C7H8 128 aa5.91□□□□□ -1.46
TMED3-205ENST00000558562 SPRR2GQ9BYE4 73 aa5.91□□□□□ -1.46
TMED3-205ENST00000558562 KRTAP2-4Q9BYR9 128 aa5.91□□□□□ -1.46
TMED3-205ENST00000558562 KRTAP10-5P60370 271 aa5.86□□□□□ -1.47
TMED3-205ENST00000558562 A0A0A0MQY5 61 aa5.82□□□□□ -1.48
TMED3-205ENST00000558562 KRTAP19-8Q3LI54 63 aa5.8□□□□□ -1.48
TMED3-205ENST00000558562 KTN1-AS1Q86SY8 53 aa5.8□□□□□ -1.48
TMED3-205ENST00000558562 ROMO1P60602 79 aa5.78□□□□□ -1.48
TMED3-205ENST00000558562 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
TMED3-205ENST00000558562 PLAC4Q8WY50 150 aa5.76□□□□□ -1.49
TMED3-205ENST00000558562 SPRR2EP22531 72 aa5.74□□□□□ -1.49
TMED3-205ENST00000558562 SPRR2BP35325 72 aa5.74□□□□□ -1.49
TMED3-205ENST00000558562 SPRR2AP35326 72 aa5.74□□□□□ -1.49
TMED3-205ENST00000558562 SPRR2FQ96RM1 72 aa5.72□□□□□ -1.49
TMED3-205ENST00000558562 KRTAP2-2Q9BYT5 123 aa5.69□□□□□ -1.5
TMED3-205ENST00000558562 KRTAP2-1Q9BYU5 128 aa5.69□□□□□ -1.5
TMED3-205ENST00000558562 PRAC1Q96KF2 57 aa5.66□□□□□ -1.5
TMED3-205ENST00000558562 C10orf95Q9H7T3 257 aa5.64□□□□□ -1.51
TMED3-205ENST00000558562 LCE1AQ5T7P2 110 aa5.59□□□□□ -1.51
TMED3-205ENST00000558562 SPRR2DP22532 72 aa5.55□□□□□ -1.52
TMED3-205ENST00000558562 KRTAP8-1Q8IUC2 63 aa5.53□□□□□ -1.52
TMED3-205ENST00000558562 KRTAP25-1Q3LHN0 102 aa5.52□□□□□ -1.53
TMED3-205ENST00000558562 GPR98Q8WXG9 6306 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms