RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 TMEM258P61165 79 aa5.44□□□□□ -1.54
PRKCH-227ENST00000557599 A8MUN3 132 aa5.42□□□□□ -1.54
PRKCH-227ENST00000557599 C4orf26Q17RF5 130 aa5.42□□□□□ -1.54
PRKCH-227ENST00000557599 CRCT1Q9UGL9 99 aa5.42□□□□□ -1.54
PRKCH-227ENST00000557599 LORP23490 312 aaPredicted RBP5.41□□□□□ -1.54
PRKCH-227ENST00000557599 COX6B2Q6YFQ2 88 aa5.4□□□□□ -1.54
PRKCH-227ENST00000557599 CYSTM1Q9H1C7 97 aa5.4□□□□□ -1.54
PRKCH-227ENST00000557599 ACYP2P14621 99 aa5.38□□□□□ -1.55
PRKCH-227ENST00000557599 DMAC1Q96GE9 116 aa5.37□□□□□ -1.55
PRKCH-227ENST00000557599 KRTAP10-6P60371 365 aaPredicted RBP5.35□□□□□ -1.55
PRKCH-227ENST00000557599 CHKB-CPT1BH3BT56 60 aa5.34□□□□□ -1.55
PRKCH-227ENST00000557599 MPLKIPQ8TAP9 179 aa5.33□□□□□ -1.56
PRKCH-227ENST00000557599 H1FX-AS1Q4G0G2 97 aa5.32□□□□□ -1.56
PRKCH-227ENST00000557599 SPTSSBQ8NFR3 76 aa5.29□□□□□ -1.56
PRKCH-227ENST00000557599 COA5Q86WW8 74 aa5.28□□□□□ -1.56
PRKCH-227ENST00000557599 SERP1Q9Y6X1 66 aa5.27□□□□□ -1.57
PRKCH-227ENST00000557599 S4R3F8 94 aa5.27□□□□□ -1.57
PRKCH-227ENST00000557599 KRTAP3-1Q9BYR8 98 aa5.25□□□□□ -1.57
PRKCH-227ENST00000557599 SSPOA2VEC9 5147 aa5.2□□□□□ -1.58
PRKCH-227ENST00000557599 USH2AO75445 5202 aa5.19□□□□□ -1.58
PRKCH-227ENST00000557599 CSAG1Q6PB30 78 aa5.19□□□□□ -1.58
PRKCH-227ENST00000557599 A0A0A0MQY5 61 aa5.18□□□□□ -1.58
PRKCH-227ENST00000557599 RPS28P62857 69 aaKnown RBP5.18□□□□□ -1.58
PRKCH-227ENST00000557599 LCA10Q71F78 164 aa5.18□□□□□ -1.58
PRKCH-227ENST00000557599 M0R2T5 61 aa5.16□□□□□ -1.58
PRKCH-227ENST00000557599 KRTAP9-8Q9BYQ0 159 aa5.16□□□□□ -1.58
PRKCH-227ENST00000557599 SMIM26A0A096LP01 95 aa5.12□□□□□ -1.59
PRKCH-227ENST00000557599 SEC61GP60059 68 aa5.12□□□□□ -1.59
PRKCH-227ENST00000557599 V9GYY9 64 aa5.11□□□□□ -1.59
PRKCH-227ENST00000557599 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.09□□□□□ -1.59
PRKCH-227ENST00000557599 PRR15LQ9BU68 103 aa5.08□□□□□ -1.6
PRKCH-227ENST00000557599 KRTAP9-7A8MTY7 169 aa5.05□□□□□ -1.6
PRKCH-227ENST00000557599 FCGBPQ9Y6R7 5405 aaPredicted RBP5.05□□□□□ -1.6
PRKCH-227ENST00000557599 A0A1B0GU69 56 aa5.04□□□□□ -1.6
PRKCH-227ENST00000557599 MT2AP02795 61 aa5.03□□□□□ -1.6
PRKCH-227ENST00000557599 LINC01558Q9Y6Z2 57 aa5.03□□□□□ -1.6
PRKCH-227ENST00000557599 H0YAA0 97 aa5.02□□□□□ -1.61
PRKCH-227ENST00000557599 Q1T7F1 81 aa5.01□□□□□ -1.61
PRKCH-227ENST00000557599 MT1FP04733 61 aa5□□□□□ -1.61
PRKCH-227ENST00000557599 ADM2Q7Z4H4 148 aa4.99□□□□□ -1.61
PRKCH-227ENST00000557599 KRTAP9-3Q9BYQ3 159 aa4.99□□□□□ -1.61
PRKCH-227ENST00000557599 KRTAP23-1A1A580 65 aa4.96□□□□□ -1.62
PRKCH-227ENST00000557599 KRTAP19-1Q8IUB9 90 aa4.95□□□□□ -1.62
PRKCH-227ENST00000557599 PSPHP1O15172 72 aa4.93□□□□□ -1.62
PRKCH-227ENST00000557599 MACF1Q9UPN3 7388 aaKnown RBP4.92□□□□□ -1.62
PRKCH-227ENST00000557599 A0A1B0GU33 70 aa4.9□□□□□ -1.63
PRKCH-227ENST00000557599 CRIPTQ9P021 101 aa4.89□□□□□ -1.63
PRKCH-227ENST00000557599 P0C880 135 aa4.88□□□□□ -1.63
PRKCH-227ENST00000557599 KRTAP10-10P60014 251 aa4.88□□□□□ -1.63
PRKCH-227ENST00000557599 R4GN34 69 aa4.88□□□□□ -1.63
PRKCH-227ENST00000557599 UQCR11O14957 56 aa4.87□□□□□ -1.63
PRKCH-227ENST00000557599 KRTAP19-6Q3LI70 58 aa4.87□□□□□ -1.63
PRKCH-227ENST00000557599 M0QZ58 72 aa4.86□□□□□ -1.63
PRKCH-227ENST00000557599 Q5VV11 94 aa4.85□□□□□ -1.63
PRKCH-227ENST00000557599 SYNE2Q8WXH0 6885 aaKnown RBP4.85□□□□□ -1.63
PRKCH-227ENST00000557599 A6NED7 52 aa4.84□□□□□ -1.63
PRKCH-227ENST00000557599 MIR22HGQ0VDD5 57 aa4.79□□□□□ -1.64
PRKCH-227ENST00000557599 LINC01554Q52M75 96 aa4.76□□□□□ -1.65
PRKCH-227ENST00000557599 SPATA8Q6RVD6 105 aa4.75□□□□□ -1.65
PRKCH-227ENST00000557599 A0A0D9SG42 100 aa4.72□□□□□ -1.65
PRKCH-227ENST00000557599 K7ERS5 55 aa4.72□□□□□ -1.65
PRKCH-227ENST00000557599 KRTAP6-3Q3LI67 103 aa4.71□□□□□ -1.66
PRKCH-227ENST00000557599 KRTAP13-4Q3LI77 160 aa4.71□□□□□ -1.66
PRKCH-227ENST00000557599 SPRR2GQ9BYE4 73 aa4.71□□□□□ -1.66
PRKCH-227ENST00000557599 CDC42SE1Q9NRR8 79 aa4.71□□□□□ -1.66
PRKCH-227ENST00000557599 BRK1Q8WUW1 75 aa4.68□□□□□ -1.66
PRKCH-227ENST00000557599 A6NN06 94 aa4.67□□□□□ -1.66
PRKCH-227ENST00000557599 A8MU10 97 aa4.66□□□□□ -1.66
PRKCH-227ENST00000557599 PLAC4Q8WY50 150 aa4.66□□□□□ -1.66
PRKCH-227ENST00000557599 SPINT4Q6UDR6 99 aa4.65□□□□□ -1.67
PRKCH-227ENST00000557599 MUC12Q9UKN1 5478 aa4.62□□□□□ -1.67
PRKCH-227ENST00000557599 KRTAP19-8Q3LI54 63 aa4.6□□□□□ -1.67
PRKCH-227ENST00000557599 CAMK2N1Q7Z7J9 78 aa4.58□□□□□ -1.68
PRKCH-227ENST00000557599 NEBP20929 6669 aa4.57□□□□□ -1.68
PRKCH-227ENST00000557599 MT1BP07438 61 aa4.57□□□□□ -1.68
PRKCH-227ENST00000557599 KRTAP12-1P59990 96 aa4.57□□□□□ -1.68
PRKCH-227ENST00000557599 KRTAP12-2P59991 146 aa4.54□□□□□ -1.68
PRKCH-227ENST00000557599 PRO0628Q9UI54 55 aa4.52□□□□□ -1.69
PRKCH-227ENST00000557599 KRTAP5-9P26371 169 aa4.49□□□□□ -1.69
PRKCH-227ENST00000557599 KRTAP10-5P60370 271 aa4.48□□□□□ -1.69
PRKCH-227ENST00000557599 PRO2289Q9P1D8 64 aa4.48□□□□□ -1.69
PRKCH-227ENST00000557599 MDN1Q9NU22 5596 aa4.46□□□□□ -1.7
PRKCH-227ENST00000557599 KMT2DO14686 5537 aa4.45□□□□□ -1.7
PRKCH-227ENST00000557599 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
PRKCH-227ENST00000557599 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
PRKCH-227ENST00000557599 ROMO1P60602 79 aa4.38□□□□□ -1.71
PRKCH-227ENST00000557599 KRTAP20-1Q3LI63 56 aa4.38□□□□□ -1.71
PRKCH-227ENST00000557599 MT1XP80297 61 aa4.34□□□□□ -1.71
PRKCH-227ENST00000557599 TNP1P09430 55 aa4.33□□□□□ -1.72
PRKCH-227ENST00000557599 C10orf95Q9H7T3 257 aa4.31□□□□□ -1.72
PRKCH-227ENST00000557599 KRTAP25-1Q3LHN0 102 aa4.3□□□□□ -1.72
PRKCH-227ENST00000557599 PRAC1Q96KF2 57 aa4.28□□□□□ -1.72
PRKCH-227ENST00000557599 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
PRKCH-227ENST00000557599 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
PRKCH-227ENST00000557599 KTN1-AS1Q86SY8 53 aa4.2□□□□□ -1.74
PRKCH-227ENST00000557599 SPRR2FQ96RM1 72 aa4.19□□□□□ -1.74
PRKCH-227ENST00000557599 KRTAP10-12P60413 245 aa4.18□□□□□ -1.74
PRKCH-227ENST00000557599 LCE1AQ5T7P2 110 aa4.17□□□□□ -1.74
PRKCH-227ENST00000557599 PP632Q6XCG6 107 aa4.16□□□□□ -1.74
PRKCH-227ENST00000557599 SPRR2EP22531 72 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms