RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 KLKP1Q107X0 134 aa6.62□□□□□ -1.35
VPS33B-206ENST00000557358 S4R3F8 94 aa6.58□□□□□ -1.36
VPS33B-206ENST00000557358 CCDC179H3BU77 68 aa6.57□□□□□ -1.36
VPS33B-206ENST00000557358 KRTAP9-3Q9BYQ3 159 aa6.56□□□□□ -1.36
VPS33B-206ENST00000557358 CSAG1Q6PB30 78 aa6.54□□□□□ -1.36
VPS33B-206ENST00000557358 NDUFC1O43677 76 aa6.53□□□□□ -1.36
VPS33B-206ENST00000557358 CYSTM1Q9H1C7 97 aa6.51□□□□□ -1.37
VPS33B-206ENST00000557358 H7BZZ5 65 aa6.49□□□□□ -1.37
VPS33B-206ENST00000557358 KRTAP3-1Q9BYR8 98 aa6.49□□□□□ -1.37
VPS33B-206ENST00000557358 A8MUN3 132 aa6.48□□□□□ -1.37
VPS33B-206ENST00000557358 LCE2BO14633 110 aa6.48□□□□□ -1.37
VPS33B-206ENST00000557358 SPANXA2-OT1Q8N9U9 137 aa6.48□□□□□ -1.37
VPS33B-206ENST00000557358 USH2AO75445 5202 aa6.47□□□□□ -1.37
VPS33B-206ENST00000557358 PCP4P48539 62 aa6.46□□□□□ -1.38
VPS33B-206ENST00000557358 LCA10Q71F78 164 aa6.46□□□□□ -1.38
VPS33B-206ENST00000557358 DMAC1Q96GE9 116 aa6.46□□□□□ -1.38
VPS33B-206ENST00000557358 SSPOA2VEC9 5147 aa6.38□□□□□ -1.39
VPS33B-206ENST00000557358 ACYP2P14621 99 aa6.38□□□□□ -1.39
VPS33B-206ENST00000557358 TMEM258P61165 79 aa6.37□□□□□ -1.39
VPS33B-206ENST00000557358 KRTAP19-1Q8IUB9 90 aa6.37□□□□□ -1.39
VPS33B-206ENST00000557358 ATP5EP56381 51 aaPredicted RBP6.36□□□□□ -1.39
VPS33B-206ENST00000557358 CHKB-CPT1BH3BT56 60 aa6.3□□□□□ -1.4
VPS33B-206ENST00000557358 KRTAP19-6Q3LI70 58 aa6.3□□□□□ -1.4
VPS33B-206ENST00000557358 KRTAP3-3Q9BYR6 98 aa6.3□□□□□ -1.4
VPS33B-206ENST00000557358 COA5Q86WW8 74 aa6.29□□□□□ -1.4
VPS33B-206ENST00000557358 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.28□□□□□ -1.4
VPS33B-206ENST00000557358 CRIPTQ9P021 101 aa6.28□□□□□ -1.4
VPS33B-206ENST00000557358 FCGBPQ9Y6R7 5405 aaPredicted RBP6.27□□□□□ -1.41
VPS33B-206ENST00000557358 Q5VV11 94 aa6.25□□□□□ -1.41
VPS33B-206ENST00000557358 H0YAA0 97 aa6.23□□□□□ -1.41
VPS33B-206ENST00000557358 SPTSSBQ8NFR3 76 aa6.23□□□□□ -1.41
VPS33B-206ENST00000557358 SPRR2GQ9BYE4 73 aa6.23□□□□□ -1.41
VPS33B-206ENST00000557358 KRTAP9-7A8MTY7 169 aa6.2□□□□□ -1.42
VPS33B-206ENST00000557358 ADM2Q7Z4H4 148 aa6.17□□□□□ -1.42
VPS33B-206ENST00000557358 KRTAP19-8Q3LI54 63 aa6.16□□□□□ -1.42
VPS33B-206ENST00000557358 SERP1Q9Y6X1 66 aa6.16□□□□□ -1.42
VPS33B-206ENST00000557358 A6NN06 94 aa6.14□□□□□ -1.43
VPS33B-206ENST00000557358 MT1BP07438 61 aa6.1□□□□□ -1.43
VPS33B-206ENST00000557358 MACF1Q9UPN3 7388 aaKnown RBP6.09□□□□□ -1.44
VPS33B-206ENST00000557358 R4GN34 69 aa6.07□□□□□ -1.44
VPS33B-206ENST00000557358 PLAC4Q8WY50 150 aa6.01□□□□□ -1.45
VPS33B-206ENST00000557358 SEC61GP60059 68 aa6□□□□□ -1.45
VPS33B-206ENST00000557358 KRTAP10-5P60370 271 aa6□□□□□ -1.45
VPS33B-206ENST00000557358 RPS28P62857 69 aaKnown RBP6□□□□□ -1.45
VPS33B-206ENST00000557358 KRTAP3-2Q9BYR7 98 aa6□□□□□ -1.45
VPS33B-206ENST00000557358 SYNE2Q8WXH0 6885 aaKnown RBP6□□□□□ -1.45
VPS33B-206ENST00000557358 M0QZ58 72 aa5.99□□□□□ -1.45
VPS33B-206ENST00000557358 P0C880 135 aa5.97□□□□□ -1.45
VPS33B-206ENST00000557358 PRO2289Q9P1D8 64 aa5.97□□□□□ -1.45
VPS33B-206ENST00000557358 LINC01558Q9Y6Z2 57 aa5.96□□□□□ -1.46
VPS33B-206ENST00000557358 SMIM26A0A096LP01 95 aa5.95□□□□□ -1.46
VPS33B-206ENST00000557358 A0A1B0GU69 56 aa5.95□□□□□ -1.46
VPS33B-206ENST00000557358 KRTAP6-3Q3LI67 103 aa5.94□□□□□ -1.46
VPS33B-206ENST00000557358 PRR15LQ9BU68 103 aa5.92□□□□□ -1.46
VPS33B-206ENST00000557358 V9GYY9 64 aa5.92□□□□□ -1.46
VPS33B-206ENST00000557358 LINC01554Q52M75 96 aa5.91□□□□□ -1.46
VPS33B-206ENST00000557358 Q1T7F1 81 aa5.89□□□□□ -1.47
VPS33B-206ENST00000557358 A0A1B0GU33 70 aa5.83□□□□□ -1.48
VPS33B-206ENST00000557358 PSPHP1O15172 72 aa5.8□□□□□ -1.48
VPS33B-206ENST00000557358 KRTAP13-4Q3LI77 160 aa5.78□□□□□ -1.48
VPS33B-206ENST00000557358 MT1XP80297 61 aa5.76□□□□□ -1.49
VPS33B-206ENST00000557358 SPATA8Q6RVD6 105 aa5.74□□□□□ -1.49
VPS33B-206ENST00000557358 UQCR11O14957 56 aa5.72□□□□□ -1.49
VPS33B-206ENST00000557358 KRTAP5-9P26371 169 aa5.67□□□□□ -1.5
VPS33B-206ENST00000557358 A0A0D9SG42 100 aa5.66□□□□□ -1.5
VPS33B-206ENST00000557358 KRTAP12-2P59991 146 aa5.66□□□□□ -1.5
VPS33B-206ENST00000557358 A6NED7 52 aa5.64□□□□□ -1.51
VPS33B-206ENST00000557358 MIR22HGQ0VDD5 57 aa5.64□□□□□ -1.51
VPS33B-206ENST00000557358 NEBP20929 6669 aa5.63□□□□□ -1.51
VPS33B-206ENST00000557358 MUC12Q9UKN1 5478 aa5.63□□□□□ -1.51
VPS33B-206ENST00000557358 CAMK2N1Q7Z7J9 78 aa5.63□□□□□ -1.51
VPS33B-206ENST00000557358 A8MU10 97 aa5.62□□□□□ -1.51
VPS33B-206ENST00000557358 KRTAP8-1Q8IUC2 63 aa5.62□□□□□ -1.51
VPS33B-206ENST00000557358 SPRR2FQ96RM1 72 aa5.59□□□□□ -1.51
VPS33B-206ENST00000557358 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
VPS33B-206ENST00000557358 KMT2DO14686 5537 aa5.55□□□□□ -1.52
VPS33B-206ENST00000557358 SPINT4Q6UDR6 99 aa5.55□□□□□ -1.52
VPS33B-206ENST00000557358 CDC42SE1Q9NRR8 79 aa5.51□□□□□ -1.53
VPS33B-206ENST00000557358 KRTAP10-7P60409 375 aaPredicted RBP5.5□□□□□ -1.53
VPS33B-206ENST00000557358 MDN1Q9NU22 5596 aa5.49□□□□□ -1.53
VPS33B-206ENST00000557358 SPRR2EP22531 72 aa5.49□□□□□ -1.53
VPS33B-206ENST00000557358 SPRR2BP35325 72 aa5.49□□□□□ -1.53
VPS33B-206ENST00000557358 SPRR2AP35326 72 aa5.49□□□□□ -1.53
VPS33B-206ENST00000557358 KRTAP10-12P60413 245 aa5.49□□□□□ -1.53
VPS33B-206ENST00000557358 KRTAP20-1Q3LI63 56 aa5.48□□□□□ -1.53
VPS33B-206ENST00000557358 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.54
VPS33B-206ENST00000557358 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
VPS33B-206ENST00000557358 K7ERS5 55 aa5.45□□□□□ -1.54
VPS33B-206ENST00000557358 BRK1Q8WUW1 75 aa5.4□□□□□ -1.54
VPS33B-206ENST00000557358 KRTAP2-3P0C7H8 128 aa5.37□□□□□ -1.55
VPS33B-206ENST00000557358 KRTAP2-4Q9BYR9 128 aa5.37□□□□□ -1.55
VPS33B-206ENST00000557358 LCE1AQ5T7P2 110 aa5.36□□□□□ -1.55
VPS33B-206ENST00000557358 SPRR2DP22532 72 aa5.31□□□□□ -1.56
VPS33B-206ENST00000557358 C10orf95Q9H7T3 257 aa5.26□□□□□ -1.57
VPS33B-206ENST00000557358 KRTAP2-2Q9BYT5 123 aa5.21□□□□□ -1.58
VPS33B-206ENST00000557358 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.58
VPS33B-206ENST00000557358 TNP1P09430 55 aa5.2□□□□□ -1.58
VPS33B-206ENST00000557358 ROMO1P60602 79 aa5.17□□□□□ -1.58
VPS33B-206ENST00000557358 LCE3BQ5TA77 95 aa5.14□□□□□ -1.59
VPS33B-206ENST00000557358 PRO0628Q9UI54 55 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms