RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
EFCAB11-209ENST00000556005 SPTSSBQ8NFR3 76 aa5.26□□□□□ -1.57
EFCAB11-209ENST00000556005 PRO0628Q9UI54 55 aa5.25□□□□□ -1.57
EFCAB11-209ENST00000556005 ABCA13Q86UQ4 5058 aa5.24□□□□□ -1.57
EFCAB11-209ENST00000556005 A0A1B0GU69 56 aa5.24□□□□□ -1.57
EFCAB11-209ENST00000556005 HERC2O95714 4834 aa5.22□□□□□ -1.57
EFCAB11-209ENST00000556005 A6NED7 52 aa5.22□□□□□ -1.57
EFCAB11-209ENST00000556005 LRP2P98164 4655 aa5.18□□□□□ -1.58
EFCAB11-209ENST00000556005 SEC61GP60059 68 aa5.17□□□□□ -1.58
EFCAB11-209ENST00000556005 SVIPQ8NHG7 77 aa5.17□□□□□ -1.58
EFCAB11-209ENST00000556005 KRTAP9-2Q9BYQ4 174 aa5.17□□□□□ -1.58
EFCAB11-209ENST00000556005 LPAP08519 4548 aa5.17□□□□□ -1.58
EFCAB11-209ENST00000556005 PCLOQ9Y6V0 5065 aa5.16□□□□□ -1.58
EFCAB11-209ENST00000556005 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.15□□□□□ -1.58
EFCAB11-209ENST00000556005 CDC42SE1Q9NRR8 79 aa5.14□□□□□ -1.59
EFCAB11-209ENST00000556005 KRTAP9-6A0A140TA67 174 aa5.13□□□□□ -1.59
EFCAB11-209ENST00000556005 SEC61BP60468 96 aaKnown RBP5.13□□□□□ -1.59
EFCAB11-209ENST00000556005 LCA10Q71F78 164 aa5.13□□□□□ -1.59
EFCAB11-209ENST00000556005 RBM12B-AS1Q9P1G2 102 aa5.12□□□□□ -1.59
EFCAB11-209ENST00000556005 UQCR11O14957 56 aa5.11□□□□□ -1.59
EFCAB11-209ENST00000556005 A8MU10 97 aa5.11□□□□□ -1.59
EFCAB11-209ENST00000556005 KRTAP4-12Q9BQ66 201 aa5.11□□□□□ -1.59
EFCAB11-209ENST00000556005 S4R3F8 94 aa5.11□□□□□ -1.59
EFCAB11-209ENST00000556005 H1FX-AS1Q4G0G2 97 aa5.1□□□□□ -1.59
EFCAB11-209ENST00000556005 SPATA8Q6RVD6 105 aa5.06□□□□□ -1.6
EFCAB11-209ENST00000556005 MIR22HGQ0VDD5 57 aa5.05□□□□□ -1.6
EFCAB11-209ENST00000556005 LCE3BQ5TA77 95 aa5.03□□□□□ -1.6
EFCAB11-209ENST00000556005 A0A1B0GU33 70 aa5.02□□□□□ -1.61
EFCAB11-209ENST00000556005 KRTAP19-1Q8IUB9 90 aa5.02□□□□□ -1.61
EFCAB11-209ENST00000556005 PMAIP1Q13794 54 aa5.01□□□□□ -1.61
EFCAB11-209ENST00000556005 MUC17Q685J3 4493 aa4.99□□□□□ -1.61
EFCAB11-209ENST00000556005 CSAG1Q6PB30 78 aa4.98□□□□□ -1.61
EFCAB11-209ENST00000556005 KRTAP4-1Q9BYQ7 146 aa4.97□□□□□ -1.61
EFCAB11-209ENST00000556005 HERC1Q15751 4861 aa4.95□□□□□ -1.62
EFCAB11-209ENST00000556005 H0YAA0 97 aa4.94□□□□□ -1.62
EFCAB11-209ENST00000556005 KRTAP10-6P60371 365 aaPredicted RBP4.94□□□□□ -1.62
EFCAB11-209ENST00000556005 A6NN06 94 aa4.92□□□□□ -1.62
EFCAB11-209ENST00000556005 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
EFCAB11-209ENST00000556005 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
EFCAB11-209ENST00000556005 HMCN2Q8NDA2 5059 aa4.91□□□□□ -1.62
EFCAB11-209ENST00000556005 ADM2Q7Z4H4 148 aa4.9□□□□□ -1.63
EFCAB11-209ENST00000556005 UBR4Q5T4S7 5183 aa4.89□□□□□ -1.63
EFCAB11-209ENST00000556005 P0C880 135 aa4.88□□□□□ -1.63
EFCAB11-209ENST00000556005 KRTAP19-2Q3LHN2 52 aa4.86□□□□□ -1.63
EFCAB11-209ENST00000556005 MUC2Q02817 5179 aa4.84□□□□□ -1.63
EFCAB11-209ENST00000556005 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.63
EFCAB11-209ENST00000556005 KTN1-AS1Q86SY8 53 aa4.83□□□□□ -1.64
EFCAB11-209ENST00000556005 K7ERS5 55 aa4.82□□□□□ -1.64
EFCAB11-209ENST00000556005 KRTAP13-4Q3LI77 160 aa4.82□□□□□ -1.64
EFCAB11-209ENST00000556005 M0QZ58 72 aa4.8□□□□□ -1.64
EFCAB11-209ENST00000556005 A0A0D9SG42 100 aa4.77□□□□□ -1.65
EFCAB11-209ENST00000556005 H3BS24 57 aa4.77□□□□□ -1.65
EFCAB11-209ENST00000556005 FLGP20930 4061 aaPredicted RBP4.74□□□□□ -1.65
EFCAB11-209ENST00000556005 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
EFCAB11-209ENST00000556005 R4GN34 69 aa4.73□□□□□ -1.65
EFCAB11-209ENST00000556005 KRTAP19-4Q3LI73 84 aa4.69□□□□□ -1.66
EFCAB11-209ENST00000556005 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
EFCAB11-209ENST00000556005 KRTAP12-2P59991 146 aa4.66□□□□□ -1.66
EFCAB11-209ENST00000556005 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
EFCAB11-209ENST00000556005 KRTAP12-1P59990 96 aa4.66□□□□□ -1.66
EFCAB11-209ENST00000556005 RNF213Q63HN8 5207 aa4.65□□□□□ -1.66
EFCAB11-209ENST00000556005 LINC01554Q52M75 96 aa4.64□□□□□ -1.67
EFCAB11-209ENST00000556005 PRAC1Q96KF2 57 aa4.64□□□□□ -1.67
EFCAB11-209ENST00000556005 ROMO1P60602 79 aa4.62□□□□□ -1.67
EFCAB11-209ENST00000556005 FAT4Q6V0I7 4981 aa4.62□□□□□ -1.67
EFCAB11-209ENST00000556005 CRIPTQ9P021 101 aa4.62□□□□□ -1.67
EFCAB11-209ENST00000556005 M0R2T5 61 aa4.61□□□□□ -1.67
EFCAB11-209ENST00000556005 MT1HP80294 61 aa4.6□□□□□ -1.67
EFCAB11-209ENST00000556005 LCE4AQ5TA78 99 aa4.59□□□□□ -1.67
EFCAB11-209ENST00000556005 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.67
EFCAB11-209ENST00000556005 KRTAP25-1Q3LHN0 102 aa4.52□□□□□ -1.69
EFCAB11-209ENST00000556005 KRTAP9-7A8MTY7 169 aa4.51□□□□□ -1.69
EFCAB11-209ENST00000556005 SPRR2GQ9BYE4 73 aa4.46□□□□□ -1.7
EFCAB11-209ENST00000556005 CAMK2N1Q7Z7J9 78 aa4.45□□□□□ -1.7
EFCAB11-209ENST00000556005 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
EFCAB11-209ENST00000556005 MT2AP02795 61 aa4.45□□□□□ -1.7
EFCAB11-209ENST00000556005 KRTAP10-10P60014 251 aa4.45□□□□□ -1.7
EFCAB11-209ENST00000556005 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
EFCAB11-209ENST00000556005 MT1FP04733 61 aa4.43□□□□□ -1.7
EFCAB11-209ENST00000556005 KRTAP4-11Q9BYQ6 195 aa4.43□□□□□ -1.7
EFCAB11-209ENST00000556005 LCE5AQ5TCM9 118 aa4.4□□□□□ -1.71
EFCAB11-209ENST00000556005 C10orf95Q9H7T3 257 aa4.4□□□□□ -1.71
EFCAB11-209ENST00000556005 PLAC4Q8WY50 150 aa4.39□□□□□ -1.71
EFCAB11-209ENST00000556005 KRTAP9-3Q9BYQ3 159 aa4.37□□□□□ -1.71
EFCAB11-209ENST00000556005 KRTAP19-8Q3LI54 63 aa4.3□□□□□ -1.72
EFCAB11-209ENST00000556005 TNP1P09430 55 aa4.26□□□□□ -1.73
EFCAB11-209ENST00000556005 PP632Q6XCG6 107 aa4.24□□□□□ -1.73
EFCAB11-209ENST00000556005 MT1BP07438 61 aa4.22□□□□□ -1.73
EFCAB11-209ENST00000556005 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
EFCAB11-209ENST00000556005 KRTAP10-5P60370 271 aa4.13□□□□□ -1.75
EFCAB11-209ENST00000556005 MT1XP80297 61 aa4.13□□□□□ -1.75
EFCAB11-209ENST00000556005 PRO2289Q9P1D8 64 aa4.11□□□□□ -1.75
EFCAB11-209ENST00000556005 CRCT1Q9UGL9 99 aa4.11□□□□□ -1.75
EFCAB11-209ENST00000556005 KRTAP5-3Q6L8H2 238 aa4.05□□□□□ -1.76
EFCAB11-209ENST00000556005 KRTAP15-1Q3LI76 137 aa4.03□□□□□ -1.77
EFCAB11-209ENST00000556005 LCE3AQ5TA76 89 aa4.03□□□□□ -1.77
EFCAB11-209ENST00000556005 USH2AO75445 5202 aa4□□□□□ -1.77
EFCAB11-209ENST00000556005 KRTAP10-12P60413 245 aa3.98□□□□□ -1.77
EFCAB11-209ENST00000556005 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
EFCAB11-209ENST00000556005 KRTAP8-1Q8IUC2 63 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms