RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 USH2AO75445 5202 aa11.23□□□□□ -0.61
TDP1-205ENST00000553527 S4R3F8 94 aa11.17□□□□□ -0.62
TDP1-205ENST00000553527 A8MUN3 132 aa11.13□□□□□ -0.63
TDP1-205ENST00000553527 C20orf197Q8N268 126 aa11.12□□□□□ -0.63
TDP1-205ENST00000553527 SNURFQ9Y675 71 aa11.12□□□□□ -0.63
TDP1-205ENST00000553527 SSPOA2VEC9 5147 aa11.11□□□□□ -0.63
TDP1-205ENST00000553527 LCA10Q71F78 164 aa11.08□□□□□ -0.64
TDP1-205ENST00000553527 COX7CP15954 63 aa11.05□□□□□ -0.64
TDP1-205ENST00000553527 KRTAP19-1Q8IUB9 90 aa11.03□□□□□ -0.64
TDP1-205ENST00000553527 DMAC1Q96GE9 116 aa11.01□□□□□ -0.65
TDP1-205ENST00000553527 ANAPC13Q9BS18 74 aa11□□□□□ -0.65
TDP1-205ENST00000553527 CSAG1Q6PB30 78 aa10.99□□□□□ -0.65
TDP1-205ENST00000553527 KRTAP3-3Q9BYR6 98 aa10.94□□□□□ -0.66
TDP1-205ENST00000553527 NDUFC1O43677 76 aa10.91□□□□□ -0.66
TDP1-205ENST00000553527 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.89□□□□□ -0.67
TDP1-205ENST00000553527 SPANXA2-OT1Q8N9U9 137 aa10.88□□□□□ -0.67
TDP1-205ENST00000553527 FCGBPQ9Y6R7 5405 aaPredicted RBP10.86□□□□□ -0.67
TDP1-205ENST00000553527 ACYP2P14621 99 aa10.85□□□□□ -0.67
TDP1-205ENST00000553527 KRTAP19-6Q3LI70 58 aa10.79□□□□□ -0.68
TDP1-205ENST00000553527 CYSTM1Q9H1C7 97 aa10.77□□□□□ -0.69
TDP1-205ENST00000553527 H7BZZ5 65 aa10.74□□□□□ -0.69
TDP1-205ENST00000553527 KRTAP9-7A8MTY7 169 aa10.73□□□□□ -0.69
TDP1-205ENST00000553527 CCDC179H3BU77 68 aa10.73□□□□□ -0.69
TDP1-205ENST00000553527 CHKB-CPT1BH3BT56 60 aa10.7□□□□□ -0.7
TDP1-205ENST00000553527 H0YAA0 97 aa10.64□□□□□ -0.71
TDP1-205ENST00000553527 SPTSSBQ8NFR3 76 aa10.64□□□□□ -0.71
TDP1-205ENST00000553527 SPRR2GQ9BYE4 73 aa10.58□□□□□ -0.72
TDP1-205ENST00000553527 ADM2Q7Z4H4 148 aa10.56□□□□□ -0.72
TDP1-205ENST00000553527 COA5Q86WW8 74 aa10.56□□□□□ -0.72
TDP1-205ENST00000553527 Q5VV11 94 aa10.55□□□□□ -0.72
TDP1-205ENST00000553527 MACF1Q9UPN3 7388 aaKnown RBP10.55□□□□□ -0.72
TDP1-205ENST00000553527 MT1BP07438 61 aa10.52□□□□□ -0.73
TDP1-205ENST00000553527 KRTAP19-8Q3LI54 63 aa10.5□□□□□ -0.73
TDP1-205ENST00000553527 SYNE2Q8WXH0 6885 aaKnown RBP10.46□□□□□ -0.73
TDP1-205ENST00000553527 CRIPTQ9P021 101 aa10.46□□□□□ -0.73
TDP1-205ENST00000553527 ATP5EP56381 51 aaPredicted RBP10.45□□□□□ -0.74
TDP1-205ENST00000553527 A6NN06 94 aa10.41□□□□□ -0.74
TDP1-205ENST00000553527 TMEM258P61165 79 aa10.39□□□□□ -0.75
TDP1-205ENST00000553527 P0C880 135 aa10.38□□□□□ -0.75
TDP1-205ENST00000553527 KRTAP3-2Q9BYR7 98 aa10.37□□□□□ -0.75
TDP1-205ENST00000553527 R4GN34 69 aa10.26□□□□□ -0.77
TDP1-205ENST00000553527 KRTAP10-5P60370 271 aa10.25□□□□□ -0.77
TDP1-205ENST00000553527 M0QZ58 72 aa10.21□□□□□ -0.77
TDP1-205ENST00000553527 KRTAP6-3Q3LI67 103 aa10.19□□□□□ -0.78
TDP1-205ENST00000553527 SEC61GP60059 68 aa10.18□□□□□ -0.78
TDP1-205ENST00000553527 PCP4P48539 62 aa10.16□□□□□ -0.78
TDP1-205ENST00000553527 SERP1Q9Y6X1 66 aa10.14□□□□□ -0.79
TDP1-205ENST00000553527 LINC01554Q52M75 96 aa10.04□□□□□ -0.8
TDP1-205ENST00000553527 PLAC4Q8WY50 150 aa10.04□□□□□ -0.8
TDP1-205ENST00000553527 A0A1B0GU69 56 aa10.02□□□□□ -0.81
TDP1-205ENST00000553527 KRTAP13-4Q3LI77 160 aa9.93□□□□□ -0.82
TDP1-205ENST00000553527 PRO2289Q9P1D8 64 aa9.93□□□□□ -0.82
TDP1-205ENST00000553527 A0A1B0GU33 70 aa9.92□□□□□ -0.82
TDP1-205ENST00000553527 PRR15LQ9BU68 103 aa9.91□□□□□ -0.82
TDP1-205ENST00000553527 MT1XP80297 61 aa9.89□□□□□ -0.83
TDP1-205ENST00000553527 LINC01558Q9Y6Z2 57 aa9.89□□□□□ -0.83
TDP1-205ENST00000553527 SPATA8Q6RVD6 105 aa9.8□□□□□ -0.84
TDP1-205ENST00000553527 MUC12Q9UKN1 5478 aa9.75□□□□□ -0.85
TDP1-205ENST00000553527 KRTAP5-9P26371 169 aa9.73□□□□□ -0.85
TDP1-205ENST00000553527 NEBP20929 6669 aa9.72□□□□□ -0.85
TDP1-205ENST00000553527 A0A0D9SG42 100 aa9.72□□□□□ -0.85
TDP1-205ENST00000553527 V9GYY9 64 aa9.7□□□□□ -0.86
TDP1-205ENST00000553527 KMT2DO14686 5537 aa9.69□□□□□ -0.86
TDP1-205ENST00000553527 SMIM26A0A096LP01 95 aa9.67□□□□□ -0.86
TDP1-205ENST00000553527 RPS28P62857 69 aaKnown RBP9.65□□□□□ -0.86
TDP1-205ENST00000553527 Q1T7F1 81 aa9.64□□□□□ -0.87
TDP1-205ENST00000553527 KRTAP12-2P59991 146 aa9.58□□□□□ -0.88
TDP1-205ENST00000553527 SPRR2FQ96RM1 72 aa9.58□□□□□ -0.88
TDP1-205ENST00000553527 KRTAP8-1Q8IUC2 63 aa9.57□□□□□ -0.88
TDP1-205ENST00000553527 A8MU10 97 aa9.56□□□□□ -0.88
TDP1-205ENST00000553527 UQCR11O14957 56 aa9.56□□□□□ -0.88
TDP1-205ENST00000553527 PSPHP1O15172 72 aa9.56□□□□□ -0.88
TDP1-205ENST00000553527 SPINT4Q6UDR6 99 aa9.55□□□□□ -0.88
TDP1-205ENST00000553527 CAMK2N1Q7Z7J9 78 aa9.54□□□□□ -0.88
TDP1-205ENST00000553527 KRTAP12-1P59990 96 aa9.51□□□□□ -0.89
TDP1-205ENST00000553527 KRTAP4-8A0A0G2JLE6 195 aa9.5□□□□□ -0.89
TDP1-205ENST00000553527 KRTAP4-8Q9BYQ9 185 aa9.5□□□□□ -0.89
TDP1-205ENST00000553527 KRTAP10-7P60409 375 aaPredicted RBP9.48□□□□□ -0.89
TDP1-205ENST00000553527 MDN1Q9NU22 5596 aa9.45□□□□□ -0.9
TDP1-205ENST00000553527 KRTAP20-1Q3LI63 56 aa9.43□□□□□ -0.9
TDP1-205ENST00000553527 SPRR2EP22531 72 aa9.41□□□□□ -0.9
TDP1-205ENST00000553527 SPRR2BP35325 72 aa9.41□□□□□ -0.9
TDP1-205ENST00000553527 SPRR2AP35326 72 aa9.41□□□□□ -0.9
TDP1-205ENST00000553527 MIR22HGQ0VDD5 57 aa9.4□□□□□ -0.9
TDP1-205ENST00000553527 KRTAP10-12P60413 245 aa9.37□□□□□ -0.91
TDP1-205ENST00000553527 A6NED7 52 aa9.29□□□□□ -0.92
TDP1-205ENST00000553527 LCE1AQ5T7P2 110 aa9.25□□□□□ -0.93
TDP1-205ENST00000553527 KRTAP2-3P0C7H8 128 aa9.2□□□□□ -0.94
TDP1-205ENST00000553527 KRTAP2-4Q9BYR9 128 aa9.2□□□□□ -0.94
TDP1-205ENST00000553527 K7ERS5 55 aa9.14□□□□□ -0.95
TDP1-205ENST00000553527 SPRR2DP22532 72 aa9.09□□□□□ -0.95
TDP1-205ENST00000553527 C10orf95Q9H7T3 257 aa9.03□□□□□ -0.96
TDP1-205ENST00000553527 CDC42SE1Q9NRR8 79 aa8.98□□□□□ -0.97
TDP1-205ENST00000553527 TNP1P09430 55 aa8.93□□□□□ -0.98
TDP1-205ENST00000553527 KRTAP2-2Q9BYT5 123 aa8.91□□□□□ -0.98
TDP1-205ENST00000553527 KRTAP2-1Q9BYU5 128 aa8.91□□□□□ -0.98
TDP1-205ENST00000553527 KRTAP19-7Q3SYF9 63 aa8.83□□□□□ -1
TDP1-205ENST00000553527 LCE3BQ5TA77 95 aa8.83□□□□□ -1
TDP1-205ENST00000553527 MT1EP04732 61 aa8.75□□□□□ -1.01
TDP1-205ENST00000553527 KRTAP25-1Q3LHN0 102 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms