RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 KRTAP10-10P60014 251 aa6.61□□□□□ -1.35
NUP188-211ENST00000550219 USH2AO75445 5202 aa6.6□□□□□ -1.35
NUP188-211ENST00000550219 SSPOA2VEC9 5147 aa6.57□□□□□ -1.36
NUP188-211ENST00000550219 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
NUP188-211ENST00000550219 C4orf26Q17RF5 130 aa6.55□□□□□ -1.36
NUP188-211ENST00000550219 KRTAP9-3Q9BYQ3 159 aa6.55□□□□□ -1.36
NUP188-211ENST00000550219 COX7CP15954 63 aa6.54□□□□□ -1.36
NUP188-211ENST00000550219 KLKP1Q107X0 134 aa6.54□□□□□ -1.36
NUP188-211ENST00000550219 KRTAP3-1Q9BYR8 98 aa6.51□□□□□ -1.37
NUP188-211ENST00000550219 C20orf197Q8N268 126 aa6.5□□□□□ -1.37
NUP188-211ENST00000550219 ANAPC13Q9BS18 74 aa6.5□□□□□ -1.37
NUP188-211ENST00000550219 SNURFQ9Y675 71 aa6.48□□□□□ -1.37
NUP188-211ENST00000550219 H1FX-AS1Q4G0G2 97 aa6.47□□□□□ -1.37
NUP188-211ENST00000550219 FCGBPQ9Y6R7 5405 aaPredicted RBP6.46□□□□□ -1.38
NUP188-211ENST00000550219 A8MUN3 132 aa6.42□□□□□ -1.38
NUP188-211ENST00000550219 CCDC179H3BU77 68 aa6.38□□□□□ -1.39
NUP188-211ENST00000550219 SPANXA2-OT1Q8N9U9 137 aa6.38□□□□□ -1.39
NUP188-211ENST00000550219 DMAC1Q96GE9 116 aa6.38□□□□□ -1.39
NUP188-211ENST00000550219 NDUFC1O43677 76 aa6.37□□□□□ -1.39
NUP188-211ENST00000550219 CYSTM1Q9H1C7 97 aa6.37□□□□□ -1.39
NUP188-211ENST00000550219 KRTAP19-6Q3LI70 58 aa6.36□□□□□ -1.39
NUP188-211ENST00000550219 H7BZZ5 65 aa6.35□□□□□ -1.39
NUP188-211ENST00000550219 S4R3F8 94 aa6.33□□□□□ -1.4
NUP188-211ENST00000550219 MACF1Q9UPN3 7388 aaKnown RBP6.32□□□□□ -1.4
NUP188-211ENST00000550219 LCA10Q71F78 164 aa6.3□□□□□ -1.4
NUP188-211ENST00000550219 ACYP2P14621 99 aa6.28□□□□□ -1.4
NUP188-211ENST00000550219 CSAG1Q6PB30 78 aa6.24□□□□□ -1.41
NUP188-211ENST00000550219 KRTAP4-8Q9BYQ9 185 aa6.23□□□□□ -1.41
NUP188-211ENST00000550219 SYNE2Q8WXH0 6885 aaKnown RBP6.21□□□□□ -1.42
NUP188-211ENST00000550219 PCP4P48539 62 aa6.17□□□□□ -1.42
NUP188-211ENST00000550219 ATP5EP56381 51 aaPredicted RBP6.17□□□□□ -1.42
NUP188-211ENST00000550219 TMEM258P61165 79 aa6.16□□□□□ -1.42
NUP188-211ENST00000550219 KRTAP6-3Q3LI67 103 aa6.15□□□□□ -1.42
NUP188-211ENST00000550219 COA5Q86WW8 74 aa6.15□□□□□ -1.42
NUP188-211ENST00000550219 CHKB-CPT1BH3BT56 60 aa6.14□□□□□ -1.43
NUP188-211ENST00000550219 H0YAA0 97 aa6.11□□□□□ -1.43
NUP188-211ENST00000550219 SPTSSBQ8NFR3 76 aa6.11□□□□□ -1.43
NUP188-211ENST00000550219 A6NN06 94 aa6.06□□□□□ -1.44
NUP188-211ENST00000550219 MT1BP07438 61 aa6.04□□□□□ -1.44
NUP188-211ENST00000550219 Q5VV11 94 aa6.04□□□□□ -1.44
NUP188-211ENST00000550219 ADM2Q7Z4H4 148 aa6.01□□□□□ -1.45
NUP188-211ENST00000550219 SPRR2GQ9BYE4 73 aa5.98□□□□□ -1.45
NUP188-211ENST00000550219 KRTAP19-8Q3LI54 63 aa5.97□□□□□ -1.45
NUP188-211ENST00000550219 SERP1Q9Y6X1 66 aa5.97□□□□□ -1.45
NUP188-211ENST00000550219 P0C880 135 aa5.95□□□□□ -1.46
NUP188-211ENST00000550219 KRTAP4-12Q9BQ66 201 aa5.95□□□□□ -1.46
NUP188-211ENST00000550219 CRIPTQ9P021 101 aa5.94□□□□□ -1.46
NUP188-211ENST00000550219 KRTAP10-5P60370 271 aa5.93□□□□□ -1.46
NUP188-211ENST00000550219 NEBP20929 6669 aa5.86□□□□□ -1.47
NUP188-211ENST00000550219 KRTAP9-9Q9BYP9 154 aa5.86□□□□□ -1.47
NUP188-211ENST00000550219 KRTAP9-4Q9BYQ2 154 aa5.86□□□□□ -1.47
NUP188-211ENST00000550219 SEC61GP60059 68 aa5.85□□□□□ -1.47
NUP188-211ENST00000550219 RPS28P62857 69 aaKnown RBP5.85□□□□□ -1.47
NUP188-211ENST00000550219 LCE3BQ5TA77 95 aa5.84□□□□□ -1.47
NUP188-211ENST00000550219 LINC01558Q9Y6Z2 57 aa5.84□□□□□ -1.47
NUP188-211ENST00000550219 KRTAP20-1Q3LI63 56 aa5.82□□□□□ -1.48
NUP188-211ENST00000550219 R4GN34 69 aa5.81□□□□□ -1.48
NUP188-211ENST00000550219 MUC12Q9UKN1 5478 aa5.81□□□□□ -1.48
NUP188-211ENST00000550219 A0A1B0GU69 56 aa5.8□□□□□ -1.48
NUP188-211ENST00000550219 M0QZ58 72 aa5.79□□□□□ -1.48
NUP188-211ENST00000550219 KRTAP5-9P26371 169 aa5.79□□□□□ -1.48
NUP188-211ENST00000550219 SMIM26A0A096LP01 95 aa5.77□□□□□ -1.49
NUP188-211ENST00000550219 A0A1B0GU33 70 aa5.74□□□□□ -1.49
NUP188-211ENST00000550219 Q1T7F1 81 aa5.74□□□□□ -1.49
NUP188-211ENST00000550219 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
NUP188-211ENST00000550219 PRR15LQ9BU68 103 aa5.74□□□□□ -1.49
NUP188-211ENST00000550219 V9GYY9 64 aa5.74□□□□□ -1.49
NUP188-211ENST00000550219 KRTAP4-8A0A0G2JLE6 195 aa5.73□□□□□ -1.49
NUP188-211ENST00000550219 KMT2DO14686 5537 aa5.66□□□□□ -1.5
NUP188-211ENST00000550219 LINC01554Q52M75 96 aa5.65□□□□□ -1.5
NUP188-211ENST00000550219 SPRR2FQ96RM1 72 aa5.65□□□□□ -1.5
NUP188-211ENST00000550219 PRO2289Q9P1D8 64 aa5.65□□□□□ -1.5
NUP188-211ENST00000550219 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
NUP188-211ENST00000550219 SPRR2EP22531 72 aa5.62□□□□□ -1.51
NUP188-211ENST00000550219 SPRR2BP35325 72 aa5.62□□□□□ -1.51
NUP188-211ENST00000550219 SPRR2AP35326 72 aa5.62□□□□□ -1.51
NUP188-211ENST00000550219 MT1XP80297 61 aa5.62□□□□□ -1.51
NUP188-211ENST00000550219 MDN1Q9NU22 5596 aa5.61□□□□□ -1.51
NUP188-211ENST00000550219 PSPHP1O15172 72 aa5.61□□□□□ -1.51
NUP188-211ENST00000550219 PLAC4Q8WY50 150 aa5.61□□□□□ -1.51
NUP188-211ENST00000550219 UQCR11O14957 56 aa5.58□□□□□ -1.52
NUP188-211ENST00000550219 KRTAP2-3P0C7H8 128 aa5.58□□□□□ -1.52
NUP188-211ENST00000550219 KRTAP2-4Q9BYR9 128 aa5.58□□□□□ -1.52
NUP188-211ENST00000550219 KRTAP8-1Q8IUC2 63 aa5.57□□□□□ -1.52
NUP188-211ENST00000550219 A0A0D9SG42 100 aa5.55□□□□□ -1.52
NUP188-211ENST00000550219 A8MU10 97 aa5.52□□□□□ -1.53
NUP188-211ENST00000550219 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
NUP188-211ENST00000550219 KRTAP12-1P59990 96 aa5.5□□□□□ -1.53
NUP188-211ENST00000550219 LCE1DQ5T752 114 aa5.5□□□□□ -1.53
NUP188-211ENST00000550219 MIR22HGQ0VDD5 57 aa5.49□□□□□ -1.53
NUP188-211ENST00000550219 KRTAP12-2P59991 146 aa5.48□□□□□ -1.53
NUP188-211ENST00000550219 LCE1AQ5T7P2 110 aa5.47□□□□□ -1.53
NUP188-211ENST00000550219 A6NED7 52 aa5.44□□□□□ -1.54
NUP188-211ENST00000550219 SPINT4Q6UDR6 99 aa5.44□□□□□ -1.54
NUP188-211ENST00000550219 SPRR2DP22532 72 aa5.43□□□□□ -1.54
NUP188-211ENST00000550219 CAMK2N1Q7Z7J9 78 aa5.39□□□□□ -1.55
NUP188-211ENST00000550219 KRTAP4-9Q9BYQ8 210 aa5.39□□□□□ -1.55
NUP188-211ENST00000550219 KRTAP2-2Q9BYT5 123 aa5.39□□□□□ -1.55
NUP188-211ENST00000550219 KRTAP2-1Q9BYU5 128 aa5.39□□□□□ -1.55
NUP188-211ENST00000550219 KRTAP10-7P60409 375 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms