RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 KRTAP3-1Q9BYR8 98 aa7.9□□□□□ -1.14
TRAFD1-203ENST00000547063 MUC2Q02817 5179 aa7.89□□□□□ -1.15
TRAFD1-203ENST00000547063 ACYP2P14621 99 aa7.87□□□□□ -1.15
TRAFD1-203ENST00000547063 ATP5EP56381 51 aaPredicted RBP7.85□□□□□ -1.15
TRAFD1-203ENST00000547063 TMEM258P61165 79 aa7.84□□□□□ -1.15
TRAFD1-203ENST00000547063 S4R3F8 94 aa7.81□□□□□ -1.16
TRAFD1-203ENST00000547063 MT1HP80294 61 aa7.75□□□□□ -1.17
TRAFD1-203ENST00000547063 CHKB-CPT1BH3BT56 60 aa7.73□□□□□ -1.17
TRAFD1-203ENST00000547063 M0R2T5 61 aa7.73□□□□□ -1.17
TRAFD1-203ENST00000547063 LCA10Q71F78 164 aa7.73□□□□□ -1.17
TRAFD1-203ENST00000547063 SPTSSBQ8NFR3 76 aa7.7□□□□□ -1.18
TRAFD1-203ENST00000547063 CSAG1Q6PB30 78 aa7.69□□□□□ -1.18
TRAFD1-203ENST00000547063 COA5Q86WW8 74 aa7.69□□□□□ -1.18
TRAFD1-203ENST00000547063 KRTAP4-8Q9BYQ9 185 aa7.69□□□□□ -1.18
TRAFD1-203ENST00000547063 FAT4Q6V0I7 4981 aa7.65□□□□□ -1.18
TRAFD1-203ENST00000547063 FLGP20930 4061 aaPredicted RBP7.61□□□□□ -1.19
TRAFD1-203ENST00000547063 SERP1Q9Y6X1 66 aa7.59□□□□□ -1.19
TRAFD1-203ENST00000547063 KRTAP9-2Q9BYQ4 174 aa7.54□□□□□ -1.2
TRAFD1-203ENST00000547063 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.52□□□□□ -1.21
TRAFD1-203ENST00000547063 KRTAP10-6P60371 365 aaPredicted RBP7.52□□□□□ -1.21
TRAFD1-203ENST00000547063 H0YAA0 97 aa7.5□□□□□ -1.21
TRAFD1-203ENST00000547063 KRTAP9-6A0A140TA67 174 aa7.49□□□□□ -1.21
TRAFD1-203ENST00000547063 RPS28P62857 69 aaKnown RBP7.45□□□□□ -1.22
TRAFD1-203ENST00000547063 KRTAP9-8Q9BYQ0 159 aa7.42□□□□□ -1.22
TRAFD1-203ENST00000547063 SEC61GP60059 68 aa7.41□□□□□ -1.22
TRAFD1-203ENST00000547063 ADM2Q7Z4H4 148 aa7.4□□□□□ -1.22
TRAFD1-203ENST00000547063 MT2AP02795 61 aa7.38□□□□□ -1.23
TRAFD1-203ENST00000547063 KRTAP4-12Q9BQ66 201 aa7.37□□□□□ -1.23
TRAFD1-203ENST00000547063 KRTAP10-10P60014 251 aa7.36□□□□□ -1.23
TRAFD1-203ENST00000547063 SMIM26A0A096LP01 95 aa7.35□□□□□ -1.23
TRAFD1-203ENST00000547063 V9GYY9 64 aa7.33□□□□□ -1.24
TRAFD1-203ENST00000547063 A0A1B0GU69 56 aa7.32□□□□□ -1.24
TRAFD1-203ENST00000547063 LINC01558Q9Y6Z2 57 aa7.32□□□□□ -1.24
TRAFD1-203ENST00000547063 MT1FP04733 61 aa7.31□□□□□ -1.24
TRAFD1-203ENST00000547063 PRR15LQ9BU68 103 aa7.31□□□□□ -1.24
TRAFD1-203ENST00000547063 CRIPTQ9P021 101 aa7.31□□□□□ -1.24
TRAFD1-203ENST00000547063 LCE3BQ5TA77 95 aa7.29□□□□□ -1.24
TRAFD1-203ENST00000547063 P0C880 135 aa7.27□□□□□ -1.25
TRAFD1-203ENST00000547063 Q1T7F1 81 aa7.26□□□□□ -1.25
TRAFD1-203ENST00000547063 KRTAP19-1Q8IUB9 90 aa7.23□□□□□ -1.25
TRAFD1-203ENST00000547063 R4GN34 69 aa7.21□□□□□ -1.26
TRAFD1-203ENST00000547063 A0A1B0GU33 70 aa7.17□□□□□ -1.26
TRAFD1-203ENST00000547063 M0QZ58 72 aa7.17□□□□□ -1.26
TRAFD1-203ENST00000547063 KRTAP9-3Q9BYQ3 159 aa7.17□□□□□ -1.26
TRAFD1-203ENST00000547063 KRTAP9-9Q9BYP9 154 aa7.16□□□□□ -1.26
TRAFD1-203ENST00000547063 KRTAP9-4Q9BYQ2 154 aa7.16□□□□□ -1.26
TRAFD1-203ENST00000547063 SPRR2GQ9BYE4 73 aa7.14□□□□□ -1.27
TRAFD1-203ENST00000547063 PSPHP1O15172 72 aa7.11□□□□□ -1.27
TRAFD1-203ENST00000547063 Q5VV11 94 aa7.09□□□□□ -1.27
TRAFD1-203ENST00000547063 UQCR11O14957 56 aa7.06□□□□□ -1.28
TRAFD1-203ENST00000547063 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
TRAFD1-203ENST00000547063 KRTAP13-4Q3LI77 160 aa7.01□□□□□ -1.29
TRAFD1-203ENST00000547063 LINC01554Q52M75 96 aa7□□□□□ -1.29
TRAFD1-203ENST00000547063 SPATA8Q6RVD6 105 aa7□□□□□ -1.29
TRAFD1-203ENST00000547063 KRTAP19-8Q3LI54 63 aa6.99□□□□□ -1.29
TRAFD1-203ENST00000547063 A6NED7 52 aa6.94□□□□□ -1.3
TRAFD1-203ENST00000547063 A6NN06 94 aa6.94□□□□□ -1.3
TRAFD1-203ENST00000547063 MIR22HGQ0VDD5 57 aa6.93□□□□□ -1.3
TRAFD1-203ENST00000547063 A0A0D9SG42 100 aa6.91□□□□□ -1.3
TRAFD1-203ENST00000547063 PLAC4Q8WY50 150 aa6.9□□□□□ -1.3
TRAFD1-203ENST00000547063 MT1BP07438 61 aa6.87□□□□□ -1.31
TRAFD1-203ENST00000547063 A8MU10 97 aa6.84□□□□□ -1.31
TRAFD1-203ENST00000547063 LCE1DQ5T752 114 aa6.84□□□□□ -1.31
TRAFD1-203ENST00000547063 KRTAP4-7Q9BYR0 210 aa6.81□□□□□ -1.32
TRAFD1-203ENST00000547063 SPINT4Q6UDR6 99 aa6.79□□□□□ -1.32
TRAFD1-203ENST00000547063 KRTAP12-1P59990 96 aa6.78□□□□□ -1.32
TRAFD1-203ENST00000547063 CDC42SE1Q9NRR8 79 aa6.77□□□□□ -1.33
TRAFD1-203ENST00000547063 K7ERS5 55 aa6.76□□□□□ -1.33
TRAFD1-203ENST00000547063 KRTAP12-2P59991 146 aa6.72□□□□□ -1.33
TRAFD1-203ENST00000547063 CAMK2N1Q7Z7J9 78 aa6.72□□□□□ -1.33
TRAFD1-203ENST00000547063 USH2AO75445 5202 aa6.69□□□□□ -1.34
TRAFD1-203ENST00000547063 KRTAP19-6Q3LI70 58 aa6.69□□□□□ -1.34
TRAFD1-203ENST00000547063 PRO2289Q9P1D8 64 aa6.69□□□□□ -1.34
TRAFD1-203ENST00000547063 KRTAP4-9Q9BYQ8 210 aa6.66□□□□□ -1.34
TRAFD1-203ENST00000547063 CRCT1Q9UGL9 99 aa6.66□□□□□ -1.34
TRAFD1-203ENST00000547063 BRK1Q8WUW1 75 aa6.64□□□□□ -1.35
TRAFD1-203ENST00000547063 SVIPQ8NHG7 77 aa6.63□□□□□ -1.35
TRAFD1-203ENST00000547063 KRTAP10-5P60370 271 aa6.62□□□□□ -1.35
TRAFD1-203ENST00000547063 LCE4AQ5TA78 99 aa6.6□□□□□ -1.35
TRAFD1-203ENST00000547063 MT1XP80297 61 aa6.59□□□□□ -1.35
TRAFD1-203ENST00000547063 FSIP2Q5CZC0 6907 aa6.55□□□□□ -1.36
TRAFD1-203ENST00000547063 KRTAP19-4Q3LI73 84 aa6.54□□□□□ -1.36
TRAFD1-203ENST00000547063 SSPOA2VEC9 5147 aa6.51□□□□□ -1.37
TRAFD1-203ENST00000547063 KRTAP4-2Q9BYR5 136 aa6.51□□□□□ -1.37
TRAFD1-203ENST00000547063 KRTAP9-7A8MTY7 169 aa6.45□□□□□ -1.38
TRAFD1-203ENST00000547063 KRTAP4-11Q9BYQ6 195 aa6.42□□□□□ -1.38
TRAFD1-203ENST00000547063 C10orf95Q9H7T3 257 aa6.41□□□□□ -1.38
TRAFD1-203ENST00000547063 PRO0628Q9UI54 55 aa6.37□□□□□ -1.39
TRAFD1-203ENST00000547063 TNP1P09430 55 aa6.36□□□□□ -1.39
TRAFD1-203ENST00000547063 ROMO1P60602 79 aa6.35□□□□□ -1.39
TRAFD1-203ENST00000547063 H3BS24 57 aa6.34□□□□□ -1.39
TRAFD1-203ENST00000547063 FCGBPQ9Y6R7 5405 aaPredicted RBP6.33□□□□□ -1.4
TRAFD1-203ENST00000547063 LCE5AQ5TCM9 118 aa6.32□□□□□ -1.4
TRAFD1-203ENST00000547063 KRTAP25-1Q3LHN0 102 aa6.3□□□□□ -1.4
TRAFD1-203ENST00000547063 KRTAP10-7P60409 375 aaPredicted RBP6.29□□□□□ -1.4
TRAFD1-203ENST00000547063 PMAIP1Q13794 54 aa6.29□□□□□ -1.4
TRAFD1-203ENST00000547063 KRTAP10-12P60413 245 aa6.28□□□□□ -1.4
TRAFD1-203ENST00000547063 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
TRAFD1-203ENST00000547063 KRTAP8-1Q8IUC2 63 aa6.09□□□□□ -1.43
TRAFD1-203ENST00000547063 LCE3AQ5TA76 89 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms