RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 MP68P56378 58 aa6.73□□□□□ -1.33
SP140-213ENST00000543928 C5orf47Q569G3 176 aa6.72□□□□□ -1.33
SP140-213ENST00000543928 C1orf64Q8NEQ6 169 aa6.72□□□□□ -1.33
SP140-213ENST00000543928 LINC00208Q96KT6 92 aa6.72□□□□□ -1.33
SP140-213ENST00000543928 KRTAP4-11Q9BYQ6 195 aa6.72□□□□□ -1.33
SP140-213ENST00000543928 KRTAP10-6P60371 365 aaPredicted RBP6.7□□□□□ -1.34
SP140-213ENST00000543928 H1FX-AS1Q4G0G2 97 aa6.7□□□□□ -1.34
SP140-213ENST00000543928 SMIM20Q8N5G0 67 aa6.67□□□□□ -1.34
SP140-213ENST00000543928 TRAV7A0A075B6U4 112 aa6.66□□□□□ -1.34
SP140-213ENST00000543928 H3BPC8 53 aa6.66□□□□□ -1.34
SP140-213ENST00000543928 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
SP140-213ENST00000543928 KLKP1Q107X0 134 aa6.63□□□□□ -1.35
SP140-213ENST00000543928 LCE4AQ5TA78 99 aa6.61□□□□□ -1.35
SP140-213ENST00000543928 KRTAP23-1A1A580 65 aa6.6□□□□□ -1.35
SP140-213ENST00000543928 S4R3F8 94 aa6.56□□□□□ -1.36
SP140-213ENST00000543928 SERP2Q8N6R1 65 aa6.55□□□□□ -1.36
SP140-213ENST00000543928 KRTAP9-8Q9BYQ0 159 aa6.55□□□□□ -1.36
SP140-213ENST00000543928 LCA10Q71F78 164 aa6.52□□□□□ -1.37
SP140-213ENST00000543928 A8MUN3 132 aa6.51□□□□□ -1.37
SP140-213ENST00000543928 SNURFQ9Y675 71 aa6.51□□□□□ -1.37
SP140-213ENST00000543928 MT2AP02795 61 aa6.5□□□□□ -1.37
SP140-213ENST00000543928 PCP4P48539 62 aa6.49□□□□□ -1.37
SP140-213ENST00000543928 C20orf197Q8N268 126 aa6.49□□□□□ -1.37
SP140-213ENST00000543928 CSAG1Q6PB30 78 aa6.47□□□□□ -1.37
SP140-213ENST00000543928 MT1FP04733 61 aa6.46□□□□□ -1.38
SP140-213ENST00000543928 LCE5AQ5TCM9 118 aa6.46□□□□□ -1.38
SP140-213ENST00000543928 DMAC1Q96GE9 116 aa6.45□□□□□ -1.38
SP140-213ENST00000543928 COX7CP15954 63 aa6.44□□□□□ -1.38
SP140-213ENST00000543928 KRTAP10-10P60014 251 aa6.44□□□□□ -1.38
SP140-213ENST00000543928 KRTAP9-7A8MTY7 169 aa6.41□□□□□ -1.38
SP140-213ENST00000543928 NDUFC1O43677 76 aa6.4□□□□□ -1.38
SP140-213ENST00000543928 ANAPC13Q9BS18 74 aa6.39□□□□□ -1.39
SP140-213ENST00000543928 ACYP2P14621 99 aa6.35□□□□□ -1.39
SP140-213ENST00000543928 SPANXA2-OT1Q8N9U9 137 aa6.35□□□□□ -1.39
SP140-213ENST00000543928 KRTAP5-3Q6L8H2 238 aa6.34□□□□□ -1.39
SP140-213ENST00000543928 KRTAP9-3Q9BYQ3 159 aa6.34□□□□□ -1.39
SP140-213ENST00000543928 CYSTM1Q9H1C7 97 aa6.3□□□□□ -1.4
SP140-213ENST00000543928 H7BZZ5 65 aa6.27□□□□□ -1.41
SP140-213ENST00000543928 CCDC179H3BU77 68 aa6.26□□□□□ -1.41
SP140-213ENST00000543928 CHKB-CPT1BH3BT56 60 aa6.25□□□□□ -1.41
SP140-213ENST00000543928 H0YAA0 97 aa6.24□□□□□ -1.41
SP140-213ENST00000543928 ADM2Q7Z4H4 148 aa6.21□□□□□ -1.42
SP140-213ENST00000543928 SPTSSBQ8NFR3 76 aa6.21□□□□□ -1.42
SP140-213ENST00000543928 COA5Q86WW8 74 aa6.17□□□□□ -1.42
SP140-213ENST00000543928 CRCT1Q9UGL9 99 aa6.17□□□□□ -1.42
SP140-213ENST00000543928 USH2AO75445 5202 aa6.17□□□□□ -1.42
SP140-213ENST00000543928 FSIP2Q5CZC0 6907 aa6.17□□□□□ -1.42
SP140-213ENST00000543928 CRIPTQ9P021 101 aa6.15□□□□□ -1.42
SP140-213ENST00000543928 A0A0A0MQY5 61 aa6.14□□□□□ -1.43
SP140-213ENST00000543928 SPRR2GQ9BYE4 73 aa6.13□□□□□ -1.43
SP140-213ENST00000543928 P0C880 135 aa6.11□□□□□ -1.43
SP140-213ENST00000543928 ATP5EP56381 51 aaPredicted RBP6.07□□□□□ -1.44
SP140-213ENST00000543928 SSPOA2VEC9 5147 aa6.05□□□□□ -1.44
SP140-213ENST00000543928 KRTAP19-8Q3LI54 63 aa6.04□□□□□ -1.44
SP140-213ENST00000543928 TMEM258P61165 79 aa6.03□□□□□ -1.44
SP140-213ENST00000543928 Q5VV11 94 aa6.02□□□□□ -1.45
SP140-213ENST00000543928 R4GN34 69 aa6.02□□□□□ -1.45
SP140-213ENST00000543928 MT1BP07438 61 aa6.01□□□□□ -1.45
SP140-213ENST00000543928 M0QZ58 72 aa5.99□□□□□ -1.45
SP140-213ENST00000543928 KRTAP19-6Q3LI70 58 aa5.96□□□□□ -1.46
SP140-213ENST00000543928 SEC61GP60059 68 aa5.93□□□□□ -1.46
SP140-213ENST00000543928 KRTAP15-1Q3LI76 137 aa5.93□□□□□ -1.46
SP140-213ENST00000543928 SERP1Q9Y6X1 66 aa5.92□□□□□ -1.46
SP140-213ENST00000543928 LINC01554Q52M75 96 aa5.9□□□□□ -1.46
SP140-213ENST00000543928 FCGBPQ9Y6R7 5405 aaPredicted RBP5.87□□□□□ -1.47
SP140-213ENST00000543928 A0A1B0GU69 56 aa5.84□□□□□ -1.47
SP140-213ENST00000543928 KRTAP13-4Q3LI77 160 aa5.84□□□□□ -1.47
SP140-213ENST00000543928 PLAC4Q8WY50 150 aa5.84□□□□□ -1.47
SP140-213ENST00000543928 A6NN06 94 aa5.82□□□□□ -1.48
SP140-213ENST00000543928 A0A1B0GU33 70 aa5.81□□□□□ -1.48
SP140-213ENST00000543928 KRTAP10-5P60370 271 aa5.8□□□□□ -1.48
SP140-213ENST00000543928 LINC01558Q9Y6Z2 57 aa5.78□□□□□ -1.48
SP140-213ENST00000543928 PRR15LQ9BU68 103 aa5.76□□□□□ -1.49
SP140-213ENST00000543928 SPATA8Q6RVD6 105 aa5.75□□□□□ -1.49
SP140-213ENST00000543928 A0A0D9SG42 100 aa5.71□□□□□ -1.5
SP140-213ENST00000543928 MT1XP80297 61 aa5.71□□□□□ -1.5
SP140-213ENST00000543928 PRO2289Q9P1D8 64 aa5.7□□□□□ -1.5
SP140-213ENST00000543928 SMIM26A0A096LP01 95 aa5.63□□□□□ -1.51
SP140-213ENST00000543928 V9GYY9 64 aa5.63□□□□□ -1.51
SP140-213ENST00000543928 MACF1Q9UPN3 7388 aaKnown RBP5.63□□□□□ -1.51
SP140-213ENST00000543928 A8MU10 97 aa5.61□□□□□ -1.51
SP140-213ENST00000543928 RPS28P62857 69 aaKnown RBP5.61□□□□□ -1.51
SP140-213ENST00000543928 Q1T7F1 81 aa5.61□□□□□ -1.51
SP140-213ENST00000543928 SPINT4Q6UDR6 99 aa5.6□□□□□ -1.51
SP140-213ENST00000543928 KRTAP12-1P59990 96 aa5.59□□□□□ -1.51
SP140-213ENST00000543928 CAMK2N1Q7Z7J9 78 aa5.59□□□□□ -1.51
SP140-213ENST00000543928 UQCR11O14957 56 aa5.57□□□□□ -1.52
SP140-213ENST00000543928 PSPHP1O15172 72 aa5.57□□□□□ -1.52
SP140-213ENST00000543928 KRTAP12-2P59991 146 aa5.55□□□□□ -1.52
SP140-213ENST00000543928 SYNE2Q8WXH0 6885 aaKnown RBP5.52□□□□□ -1.53
SP140-213ENST00000543928 MIR22HGQ0VDD5 57 aa5.48□□□□□ -1.53
SP140-213ENST00000543928 KRTAP10-7P60409 375 aaPredicted RBP5.46□□□□□ -1.54
SP140-213ENST00000543928 KRTAP6-3Q3LI67 103 aa5.46□□□□□ -1.54
SP140-213ENST00000543928 KRTAP10-12P60413 245 aa5.42□□□□□ -1.54
SP140-213ENST00000543928 A6NED7 52 aa5.4□□□□□ -1.54
SP140-213ENST00000543928 KMT2DO14686 5537 aa5.39□□□□□ -1.55
SP140-213ENST00000543928 KRTAP8-1Q8IUC2 63 aa5.35□□□□□ -1.55
SP140-213ENST00000543928 KRTAP5-9P26371 169 aa5.34□□□□□ -1.55
SP140-213ENST00000543928 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
SP140-213ENST00000543928 K7ERS5 55 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms