RNA–Protein interactions for RNA: ENST00000542933.5

LINC01089-209, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 1,220 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-209ENST00000542933 KRTAP10-10P60014 251 aa7.38□□□□□ -1.23
LINC01089-209ENST00000542933 A8MUN3 132 aa7.35□□□□□ -1.23
LINC01089-209ENST00000542933 S4R3F8 94 aa7.35□□□□□ -1.23
LINC01089-209ENST00000542933 DMAC1Q96GE9 116 aa7.31□□□□□ -1.24
LINC01089-209ENST00000542933 CCDC179H3BU77 68 aa7.3□□□□□ -1.24
LINC01089-209ENST00000542933 NDUFC1O43677 76 aa7.3□□□□□ -1.24
LINC01089-209ENST00000542933 KRTAP9-3Q9BYQ3 159 aa7.3□□□□□ -1.24
LINC01089-209ENST00000542933 LCA10Q71F78 164 aa7.29□□□□□ -1.24
LINC01089-209ENST00000542933 SPANXA2-OT1Q8N9U9 137 aa7.28□□□□□ -1.24
LINC01089-209ENST00000542933 CYSTM1Q9H1C7 97 aa7.28□□□□□ -1.24
LINC01089-209ENST00000542933 USH2AO75445 5202 aa7.27□□□□□ -1.24
LINC01089-209ENST00000542933 CSAG1Q6PB30 78 aa7.26□□□□□ -1.25
LINC01089-209ENST00000542933 H7BZZ5 65 aa7.25□□□□□ -1.25
LINC01089-209ENST00000542933 ACYP2P14621 99 aa7.23□□□□□ -1.25
LINC01089-209ENST00000542933 LCE2BO14633 110 aa7.21□□□□□ -1.26
LINC01089-209ENST00000542933 KRTAP3-3Q9BYR6 98 aa7.19□□□□□ -1.26
LINC01089-209ENST00000542933 SVIPQ8NHG7 77 aa7.17□□□□□ -1.26
LINC01089-209ENST00000542933 SSPOA2VEC9 5147 aa7.15□□□□□ -1.26
LINC01089-209ENST00000542933 CHKB-CPT1BH3BT56 60 aa7.13□□□□□ -1.27
LINC01089-209ENST00000542933 KRTAP9-7A8MTY7 169 aa7.12□□□□□ -1.27
LINC01089-209ENST00000542933 PCP4P48539 62 aa7.07□□□□□ -1.28
LINC01089-209ENST00000542933 ATP5EP56381 51 aaPredicted RBP7.07□□□□□ -1.28
LINC01089-209ENST00000542933 COA5Q86WW8 74 aa7.07□□□□□ -1.28
LINC01089-209ENST00000542933 SPTSSBQ8NFR3 76 aa7.07□□□□□ -1.28
LINC01089-209ENST00000542933 TMEM258P61165 79 aa7.05□□□□□ -1.28
LINC01089-209ENST00000542933 H0YAA0 97 aa7.03□□□□□ -1.28
LINC01089-209ENST00000542933 KRTAP19-1Q8IUB9 90 aa7.02□□□□□ -1.29
LINC01089-209ENST00000542933 SPRR2GQ9BYE4 73 aa6.98□□□□□ -1.29
LINC01089-209ENST00000542933 CRIPTQ9P021 101 aa6.96□□□□□ -1.3
LINC01089-209ENST00000542933 FCGBPQ9Y6R7 5405 aaPredicted RBP6.96□□□□□ -1.3
LINC01089-209ENST00000542933 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.95□□□□□ -1.3
LINC01089-209ENST00000542933 KRTAP19-6Q3LI70 58 aa6.94□□□□□ -1.3
LINC01089-209ENST00000542933 ADM2Q7Z4H4 148 aa6.94□□□□□ -1.3
LINC01089-209ENST00000542933 KRTAP19-8Q3LI54 63 aa6.9□□□□□ -1.3
LINC01089-209ENST00000542933 Q5VV11 94 aa6.89□□□□□ -1.31
LINC01089-209ENST00000542933 MT1BP07438 61 aa6.86□□□□□ -1.31
LINC01089-209ENST00000542933 P0C880 135 aa6.84□□□□□ -1.31
LINC01089-209ENST00000542933 KRTAP3-2Q9BYR7 98 aa6.84□□□□□ -1.31
LINC01089-209ENST00000542933 SERP1Q9Y6X1 66 aa6.84□□□□□ -1.31
LINC01089-209ENST00000542933 SEC61GP60059 68 aa6.78□□□□□ -1.32
LINC01089-209ENST00000542933 R4GN34 69 aa6.75□□□□□ -1.33
LINC01089-209ENST00000542933 A0A1B0GU69 56 aa6.71□□□□□ -1.34
LINC01089-209ENST00000542933 A6NN06 94 aa6.71□□□□□ -1.34
LINC01089-209ENST00000542933 M0QZ58 72 aa6.71□□□□□ -1.34
LINC01089-209ENST00000542933 LINC01558Q9Y6Z2 57 aa6.67□□□□□ -1.34
LINC01089-209ENST00000542933 MACF1Q9UPN3 7388 aaKnown RBP6.67□□□□□ -1.34
LINC01089-209ENST00000542933 KRTAP10-5P60370 271 aa6.66□□□□□ -1.34
LINC01089-209ENST00000542933 PRR15LQ9BU68 103 aa6.65□□□□□ -1.34
LINC01089-209ENST00000542933 RPS28P62857 69 aaKnown RBP6.63□□□□□ -1.35
LINC01089-209ENST00000542933 SYNE2Q8WXH0 6885 aaKnown RBP6.61□□□□□ -1.35
LINC01089-209ENST00000542933 A0A1B0GU33 70 aa6.61□□□□□ -1.35
LINC01089-209ENST00000542933 SMIM26A0A096LP01 95 aa6.6□□□□□ -1.35
LINC01089-209ENST00000542933 LINC01554Q52M75 96 aa6.6□□□□□ -1.35
LINC01089-209ENST00000542933 PLAC4Q8WY50 150 aa6.6□□□□□ -1.35
LINC01089-209ENST00000542933 V9GYY9 64 aa6.59□□□□□ -1.35
LINC01089-209ENST00000542933 KRTAP13-4Q3LI77 160 aa6.57□□□□□ -1.36
LINC01089-209ENST00000542933 Q1T7F1 81 aa6.55□□□□□ -1.36
LINC01089-209ENST00000542933 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
LINC01089-209ENST00000542933 SPATA8Q6RVD6 105 aa6.52□□□□□ -1.37
LINC01089-209ENST00000542933 MT1XP80297 61 aa6.49□□□□□ -1.37
LINC01089-209ENST00000542933 PSPHP1O15172 72 aa6.48□□□□□ -1.37
LINC01089-209ENST00000542933 A0A0D9SG42 100 aa6.45□□□□□ -1.38
LINC01089-209ENST00000542933 KRTAP6-3Q3LI67 103 aa6.44□□□□□ -1.38
LINC01089-209ENST00000542933 UQCR11O14957 56 aa6.43□□□□□ -1.38
LINC01089-209ENST00000542933 A8MU10 97 aa6.37□□□□□ -1.39
LINC01089-209ENST00000542933 SPINT4Q6UDR6 99 aa6.34□□□□□ -1.39
LINC01089-209ENST00000542933 MIR22HGQ0VDD5 57 aa6.33□□□□□ -1.4
LINC01089-209ENST00000542933 KRTAP12-1P59990 96 aa6.31□□□□□ -1.4
LINC01089-209ENST00000542933 KRTAP12-2P59991 146 aa6.31□□□□□ -1.4
LINC01089-209ENST00000542933 A6NED7 52 aa6.3□□□□□ -1.4
LINC01089-209ENST00000542933 NEBP20929 6669 aa6.3□□□□□ -1.4
LINC01089-209ENST00000542933 CAMK2N1Q7Z7J9 78 aa6.27□□□□□ -1.41
LINC01089-209ENST00000542933 KMT2DO14686 5537 aa6.27□□□□□ -1.41
LINC01089-209ENST00000542933 KRTAP5-9P26371 169 aa6.26□□□□□ -1.41
LINC01089-209ENST00000542933 MUC12Q9UKN1 5478 aa6.23□□□□□ -1.41
LINC01089-209ENST00000542933 KRTAP10-7P60409 375 aaPredicted RBP6.19□□□□□ -1.42
LINC01089-209ENST00000542933 KRTAP20-1Q3LI63 56 aa6.18□□□□□ -1.42
LINC01089-209ENST00000542933 KRTAP10-12P60413 245 aa6.17□□□□□ -1.42
LINC01089-209ENST00000542933 KRTAP8-1Q8IUC2 63 aa6.17□□□□□ -1.42
LINC01089-209ENST00000542933 K7ERS5 55 aa6.14□□□□□ -1.43
LINC01089-209ENST00000542933 MDN1Q9NU22 5596 aa6.14□□□□□ -1.43
LINC01089-209ENST00000542933 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
LINC01089-209ENST00000542933 SPRR2FQ96RM1 72 aa6.11□□□□□ -1.43
LINC01089-209ENST00000542933 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
LINC01089-209ENST00000542933 CDC42SE1Q9NRR8 79 aa6.11□□□□□ -1.43
LINC01089-209ENST00000542933 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
LINC01089-209ENST00000542933 SPRR2EP22531 72 aa5.97□□□□□ -1.45
LINC01089-209ENST00000542933 SPRR2BP35325 72 aa5.97□□□□□ -1.45
LINC01089-209ENST00000542933 SPRR2AP35326 72 aa5.97□□□□□ -1.45
LINC01089-209ENST00000542933 BRK1Q8WUW1 75 aa5.95□□□□□ -1.46
LINC01089-209ENST00000542933 LCE1AQ5T7P2 110 aa5.91□□□□□ -1.46
LINC01089-209ENST00000542933 TNP1P09430 55 aa5.9□□□□□ -1.46
LINC01089-209ENST00000542933 ROMO1P60602 79 aa5.79□□□□□ -1.48
LINC01089-209ENST00000542933 KRTAP25-1Q3LHN0 102 aa5.79□□□□□ -1.48
LINC01089-209ENST00000542933 KRTAP19-7Q3SYF9 63 aa5.79□□□□□ -1.48
LINC01089-209ENST00000542933 SPRR2DP22532 72 aa5.77□□□□□ -1.49
LINC01089-209ENST00000542933 KRTAP2-3P0C7H8 128 aa5.76□□□□□ -1.49
LINC01089-209ENST00000542933 KRTAP2-4Q9BYR9 128 aa5.76□□□□□ -1.49
LINC01089-209ENST00000542933 MT1EP04732 61 aa5.74□□□□□ -1.49
LINC01089-209ENST00000542933 GPR98Q8WXG9 6306 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms