RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 FAM236DA0A1B0GTK5 79 aa5.98□□□□□ -1.45
SRGAP1-205ENST00000542841 FAM236CP0DP71 79 aa5.98□□□□□ -1.45
SRGAP1-205ENST00000542841 USH2AO75445 5202 aa5.97□□□□□ -1.45
SRGAP1-205ENST00000542841 HRES1P13985 223 aa5.96□□□□□ -1.46
SRGAP1-205ENST00000542841 SSPOA2VEC9 5147 aa5.96□□□□□ -1.46
SRGAP1-205ENST00000542841 A8MUN3 132 aa5.92□□□□□ -1.46
SRGAP1-205ENST00000542841 DMAC1Q96GE9 116 aa5.9□□□□□ -1.46
SRGAP1-205ENST00000542841 FCGBPQ9Y6R7 5405 aaPredicted RBP5.88□□□□□ -1.47
SRGAP1-205ENST00000542841 ACYP2P14621 99 aa5.87□□□□□ -1.47
SRGAP1-205ENST00000542841 C4orf26Q17RF5 130 aa5.86□□□□□ -1.47
SRGAP1-205ENST00000542841 SERP1Q9Y6X1 66 aa5.86□□□□□ -1.47
SRGAP1-205ENST00000542841 MPLKIPQ8TAP9 179 aa5.85□□□□□ -1.47
SRGAP1-205ENST00000542841 RPS28P62857 69 aaKnown RBP5.84□□□□□ -1.47
SRGAP1-205ENST00000542841 KRTAP9-8Q9BYQ0 159 aa5.84□□□□□ -1.47
SRGAP1-205ENST00000542841 RBM12B-AS1Q9P1G2 102 aa5.84□□□□□ -1.47
SRGAP1-205ENST00000542841 MACF1Q9UPN3 7388 aaKnown RBP5.82□□□□□ -1.48
SRGAP1-205ENST00000542841 SYNE2Q8WXH0 6885 aaKnown RBP5.81□□□□□ -1.48
SRGAP1-205ENST00000542841 KRTAP19-1Q8IUB9 90 aa5.8□□□□□ -1.48
SRGAP1-205ENST00000542841 COA5Q86WW8 74 aa5.79□□□□□ -1.48
SRGAP1-205ENST00000542841 KRTAP3-1Q9BYR8 98 aa5.78□□□□□ -1.48
SRGAP1-205ENST00000542841 CHKB-CPT1BH3BT56 60 aa5.75□□□□□ -1.49
SRGAP1-205ENST00000542841 H1FX-AS1Q4G0G2 97 aa5.74□□□□□ -1.49
SRGAP1-205ENST00000542841 LCE2BO14633 110 aa5.73□□□□□ -1.49
SRGAP1-205ENST00000542841 SPTSSBQ8NFR3 76 aa5.72□□□□□ -1.49
SRGAP1-205ENST00000542841 MT2AP02795 61 aa5.71□□□□□ -1.5
SRGAP1-205ENST00000542841 SMIM26A0A096LP01 95 aa5.7□□□□□ -1.5
SRGAP1-205ENST00000542841 S4R3F8 94 aa5.68□□□□□ -1.5
SRGAP1-205ENST00000542841 MT1FP04733 61 aa5.67□□□□□ -1.5
SRGAP1-205ENST00000542841 KRTAP9-3Q9BYQ3 159 aa5.67□□□□□ -1.5
SRGAP1-205ENST00000542841 KRTAP10-10P60014 251 aa5.66□□□□□ -1.5
SRGAP1-205ENST00000542841 V9GYY9 64 aa5.65□□□□□ -1.5
SRGAP1-205ENST00000542841 LCA10Q71F78 164 aa5.63□□□□□ -1.51
SRGAP1-205ENST00000542841 Q1T7F1 81 aa5.61□□□□□ -1.51
SRGAP1-205ENST00000542841 KRTAP19-6Q3LI70 58 aa5.6□□□□□ -1.51
SRGAP1-205ENST00000542841 KRTAP3-3Q9BYR6 98 aa5.6□□□□□ -1.51
SRGAP1-205ENST00000542841 KRTAP6-3Q3LI67 103 aa5.59□□□□□ -1.51
SRGAP1-205ENST00000542841 LINC01558Q9Y6Z2 57 aa5.59□□□□□ -1.51
SRGAP1-205ENST00000542841 CSAG1Q6PB30 78 aa5.58□□□□□ -1.52
SRGAP1-205ENST00000542841 PRR15LQ9BU68 103 aa5.53□□□□□ -1.52
SRGAP1-205ENST00000542841 SEC61GP60059 68 aa5.51□□□□□ -1.53
SRGAP1-205ENST00000542841 A0A1B0GU69 56 aa5.5□□□□□ -1.53
SRGAP1-205ENST00000542841 H0YAA0 97 aa5.5□□□□□ -1.53
SRGAP1-205ENST00000542841 NEBP20929 6669 aa5.45□□□□□ -1.54
SRGAP1-205ENST00000542841 PSPHP1O15172 72 aa5.42□□□□□ -1.54
SRGAP1-205ENST00000542841 Q5VV11 94 aa5.42□□□□□ -1.54
SRGAP1-205ENST00000542841 MUC12Q9UKN1 5478 aa5.4□□□□□ -1.54
SRGAP1-205ENST00000542841 ADM2Q7Z4H4 148 aa5.38□□□□□ -1.55
SRGAP1-205ENST00000542841 KRTAP3-2Q9BYR7 98 aa5.38□□□□□ -1.55
SRGAP1-205ENST00000542841 KRTAP20-1Q3LI63 56 aa5.37□□□□□ -1.55
SRGAP1-205ENST00000542841 UQCR11O14957 56 aa5.35□□□□□ -1.55
SRGAP1-205ENST00000542841 A0A1B0GU33 70 aa5.34□□□□□ -1.55
SRGAP1-205ENST00000542841 P0C880 135 aa5.32□□□□□ -1.56
SRGAP1-205ENST00000542841 A6NED7 52 aa5.3□□□□□ -1.56
SRGAP1-205ENST00000542841 CRIPTQ9P021 101 aa5.3□□□□□ -1.56
SRGAP1-205ENST00000542841 M0QZ58 72 aa5.29□□□□□ -1.56
SRGAP1-205ENST00000542841 SVIPQ8NHG7 77 aa5.28□□□□□ -1.56
SRGAP1-205ENST00000542841 MIR22HGQ0VDD5 57 aa5.25□□□□□ -1.57
SRGAP1-205ENST00000542841 SPATA8Q6RVD6 105 aa5.25□□□□□ -1.57
SRGAP1-205ENST00000542841 CDC42SE1Q9NRR8 79 aa5.24□□□□□ -1.57
SRGAP1-205ENST00000542841 R4GN34 69 aa5.23□□□□□ -1.57
SRGAP1-205ENST00000542841 A6NN06 94 aa5.22□□□□□ -1.57
SRGAP1-205ENST00000542841 MDN1Q9NU22 5596 aa5.18□□□□□ -1.58
SRGAP1-205ENST00000542841 KRTAP13-4Q3LI77 160 aa5.18□□□□□ -1.58
SRGAP1-205ENST00000542841 BRK1Q8WUW1 75 aa5.18□□□□□ -1.58
SRGAP1-205ENST00000542841 KRTAP5-9P26371 169 aa5.16□□□□□ -1.58
SRGAP1-205ENST00000542841 KMT2DO14686 5537 aa5.15□□□□□ -1.59
SRGAP1-205ENST00000542841 SPRR2GQ9BYE4 73 aa5.13□□□□□ -1.59
SRGAP1-205ENST00000542841 KRTAP2-3P0C7H8 128 aa5.12□□□□□ -1.59
SRGAP1-205ENST00000542841 KRTAP2-4Q9BYR9 128 aa5.12□□□□□ -1.59
SRGAP1-205ENST00000542841 A8MU10 97 aa5.09□□□□□ -1.59
SRGAP1-205ENST00000542841 K7ERS5 55 aa5.09□□□□□ -1.59
SRGAP1-205ENST00000542841 MT1BP07438 61 aa5.09□□□□□ -1.59
SRGAP1-205ENST00000542841 PRO0628Q9UI54 55 aa5.09□□□□□ -1.59
SRGAP1-205ENST00000542841 A0A0D9SG42 100 aa5.07□□□□□ -1.6
SRGAP1-205ENST00000542841 KRTAP10-5P60370 271 aa5.07□□□□□ -1.6
SRGAP1-205ENST00000542841 LINC01554Q52M75 96 aa5.05□□□□□ -1.6
SRGAP1-205ENST00000542841 KRTAP12-1P59990 96 aa5.03□□□□□ -1.6
SRGAP1-205ENST00000542841 KRTAP19-8Q3LI54 63 aa5.02□□□□□ -1.61
SRGAP1-205ENST00000542841 SPINT4Q6UDR6 99 aa5□□□□□ -1.61
SRGAP1-205ENST00000542841 KRTAP12-2P59991 146 aa4.98□□□□□ -1.61
SRGAP1-205ENST00000542841 PLAC4Q8WY50 150 aa4.96□□□□□ -1.62
SRGAP1-205ENST00000542841 SPRR2EP22531 72 aa4.95□□□□□ -1.62
SRGAP1-205ENST00000542841 SPRR2BP35325 72 aa4.95□□□□□ -1.62
SRGAP1-205ENST00000542841 SPRR2AP35326 72 aa4.95□□□□□ -1.62
SRGAP1-205ENST00000542841 KRTAP2-2Q9BYT5 123 aa4.94□□□□□ -1.62
SRGAP1-205ENST00000542841 KRTAP2-1Q9BYU5 128 aa4.94□□□□□ -1.62
SRGAP1-205ENST00000542841 SPRR2FQ96RM1 72 aa4.93□□□□□ -1.62
SRGAP1-205ENST00000542841 PMAIP1Q13794 54 aa4.92□□□□□ -1.62
SRGAP1-205ENST00000542841 CAMK2N1Q7Z7J9 78 aa4.88□□□□□ -1.63
SRGAP1-205ENST00000542841 ROMO1P60602 79 aa4.82□□□□□ -1.64
SRGAP1-205ENST00000542841 LCE1AQ5T7P2 110 aa4.82□□□□□ -1.64
SRGAP1-205ENST00000542841 SPRR2DP22532 72 aa4.8□□□□□ -1.64
SRGAP1-205ENST00000542841 KRTAP8-1Q8IUC2 63 aa4.79□□□□□ -1.64
SRGAP1-205ENST00000542841 PRO2289Q9P1D8 64 aa4.77□□□□□ -1.65
SRGAP1-205ENST00000542841 C10orf95Q9H7T3 257 aa4.74□□□□□ -1.65
SRGAP1-205ENST00000542841 MT1XP80297 61 aa4.73□□□□□ -1.65
SRGAP1-205ENST00000542841 KTN1-AS1Q86SY8 53 aa4.72□□□□□ -1.65
SRGAP1-205ENST00000542841 KRTAP25-1Q3LHN0 102 aa4.7□□□□□ -1.66
SRGAP1-205ENST00000542841 LCE3BQ5TA77 95 aa4.69□□□□□ -1.66
SRGAP1-205ENST00000542841 GPR98Q8WXG9 6306 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms