RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 NDUFC1O43677 76 aa6.37□□□□□ -1.39
CACNA1C-IT3-201ENST00000542680 KRTAP4-1Q9BYQ7 146 aa6.36□□□□□ -1.39
CACNA1C-IT3-201ENST00000542680 SNURFQ9Y675 71 aa6.35□□□□□ -1.39
CACNA1C-IT3-201ENST00000542680 KRTAP10-6P60371 365 aaPredicted RBP6.34□□□□□ -1.39
CACNA1C-IT3-201ENST00000542680 MT1HP80294 61 aa6.34□□□□□ -1.39
CACNA1C-IT3-201ENST00000542680 CCDC179H3BU77 68 aa6.32□□□□□ -1.4
CACNA1C-IT3-201ENST00000542680 HRES1P13985 223 aa6.31□□□□□ -1.4
CACNA1C-IT3-201ENST00000542680 PCP4P48539 62 aa6.31□□□□□ -1.4
CACNA1C-IT3-201ENST00000542680 MPLKIPQ8TAP9 179 aa6.29□□□□□ -1.4
CACNA1C-IT3-201ENST00000542680 SPANXA2-OT1Q8N9U9 137 aa6.28□□□□□ -1.4
CACNA1C-IT3-201ENST00000542680 RBM12B-AS1Q9P1G2 102 aa6.28□□□□□ -1.4
CACNA1C-IT3-201ENST00000542680 H7BZZ5 65 aa6.27□□□□□ -1.41
CACNA1C-IT3-201ENST00000542680 KRTAP19-2Q3LHN2 52 aa6.27□□□□□ -1.41
CACNA1C-IT3-201ENST00000542680 COX6B2Q6YFQ2 88 aa6.25□□□□□ -1.41
CACNA1C-IT3-201ENST00000542680 A8MUN3 132 aa6.24□□□□□ -1.41
CACNA1C-IT3-201ENST00000542680 CYSTM1Q9H1C7 97 aa6.24□□□□□ -1.41
CACNA1C-IT3-201ENST00000542680 C4orf26Q17RF5 130 aa6.23□□□□□ -1.41
CACNA1C-IT3-201ENST00000542680 NEBP20929 6669 aa6.22□□□□□ -1.41
CACNA1C-IT3-201ENST00000542680 ATP5EP56381 51 aaPredicted RBP6.21□□□□□ -1.42
CACNA1C-IT3-201ENST00000542680 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.42
CACNA1C-IT3-201ENST00000542680 TMEM258P61165 79 aa6.2□□□□□ -1.42
CACNA1C-IT3-201ENST00000542680 DMAC1Q96GE9 116 aa6.2□□□□□ -1.42
CACNA1C-IT3-201ENST00000542680 LCE1DQ5T752 114 aa6.19□□□□□ -1.42
CACNA1C-IT3-201ENST00000542680 FAM236DA0A1B0GTK5 79 aa6.18□□□□□ -1.42
CACNA1C-IT3-201ENST00000542680 FAM236CP0DP71 79 aa6.18□□□□□ -1.42
CACNA1C-IT3-201ENST00000542680 FLGP20930 4061 aaPredicted RBP6.15□□□□□ -1.42
CACNA1C-IT3-201ENST00000542680 KRTAP3-1Q9BYR8 98 aa6.15□□□□□ -1.42
CACNA1C-IT3-201ENST00000542680 H1FX-AS1Q4G0G2 97 aa6.14□□□□□ -1.43
CACNA1C-IT3-201ENST00000542680 ACYP2P14621 99 aa6.13□□□□□ -1.43
CACNA1C-IT3-201ENST00000542680 KRTAP6-3Q3LI67 103 aa6.1□□□□□ -1.43
CACNA1C-IT3-201ENST00000542680 M0R2T5 61 aa6.07□□□□□ -1.44
CACNA1C-IT3-201ENST00000542680 KRTAP20-1Q3LI63 56 aa6.05□□□□□ -1.44
CACNA1C-IT3-201ENST00000542680 S4R3F8 94 aa6.05□□□□□ -1.44
CACNA1C-IT3-201ENST00000542680 KRTAP4-9Q9BYQ8 210 aa6.03□□□□□ -1.44
CACNA1C-IT3-201ENST00000542680 COA5Q86WW8 74 aa6.02□□□□□ -1.45
CACNA1C-IT3-201ENST00000542680 CHKB-CPT1BH3BT56 60 aa6.01□□□□□ -1.45
CACNA1C-IT3-201ENST00000542680 LCA10Q71F78 164 aa6□□□□□ -1.45
CACNA1C-IT3-201ENST00000542680 SPTSSBQ8NFR3 76 aa6□□□□□ -1.45
CACNA1C-IT3-201ENST00000542680 SERP1Q9Y6X1 66 aa5.99□□□□□ -1.45
CACNA1C-IT3-201ENST00000542680 MUC12Q9UKN1 5478 aa5.97□□□□□ -1.45
CACNA1C-IT3-201ENST00000542680 CSAG1Q6PB30 78 aa5.95□□□□□ -1.46
CACNA1C-IT3-201ENST00000542680 KRTAP4-2Q9BYR5 136 aa5.94□□□□□ -1.46
CACNA1C-IT3-201ENST00000542680 RPS28P62857 69 aaKnown RBP5.92□□□□□ -1.46
CACNA1C-IT3-201ENST00000542680 KRTAP9-8Q9BYQ0 159 aa5.88□□□□□ -1.47
CACNA1C-IT3-201ENST00000542680 H0YAA0 97 aa5.86□□□□□ -1.47
CACNA1C-IT3-201ENST00000542680 H3BS24 57 aa5.82□□□□□ -1.48
CACNA1C-IT3-201ENST00000542680 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
CACNA1C-IT3-201ENST00000542680 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
CACNA1C-IT3-201ENST00000542680 SMIM26A0A096LP01 95 aa5.81□□□□□ -1.48
CACNA1C-IT3-201ENST00000542680 KRTAP4-11Q9BYQ6 195 aa5.8□□□□□ -1.48
CACNA1C-IT3-201ENST00000542680 V9GYY9 64 aa5.78□□□□□ -1.48
CACNA1C-IT3-201ENST00000542680 SEC61GP60059 68 aa5.77□□□□□ -1.49
CACNA1C-IT3-201ENST00000542680 LINC01558Q9Y6Z2 57 aa5.76□□□□□ -1.49
CACNA1C-IT3-201ENST00000542680 KMT2DO14686 5537 aa5.76□□□□□ -1.49
CACNA1C-IT3-201ENST00000542680 GPR98Q8WXG9 6306 aa5.76□□□□□ -1.49
CACNA1C-IT3-201ENST00000542680 Q1T7F1 81 aa5.74□□□□□ -1.49
CACNA1C-IT3-201ENST00000542680 ADM2Q7Z4H4 148 aa5.73□□□□□ -1.49
CACNA1C-IT3-201ENST00000542680 PRR15LQ9BU68 103 aa5.73□□□□□ -1.49
CACNA1C-IT3-201ENST00000542680 A0A1B0GU69 56 aa5.72□□□□□ -1.49
CACNA1C-IT3-201ENST00000542680 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
CACNA1C-IT3-201ENST00000542680 MDN1Q9NU22 5596 aa5.7□□□□□ -1.5
CACNA1C-IT3-201ENST00000542680 MT2AP02795 61 aa5.69□□□□□ -1.5
CACNA1C-IT3-201ENST00000542680 CRIPTQ9P021 101 aa5.68□□□□□ -1.5
CACNA1C-IT3-201ENST00000542680 KRTAP2-3P0C7H8 128 aa5.66□□□□□ -1.5
CACNA1C-IT3-201ENST00000542680 KRTAP2-4Q9BYR9 128 aa5.66□□□□□ -1.5
CACNA1C-IT3-201ENST00000542680 MT1FP04733 61 aa5.65□□□□□ -1.5
CACNA1C-IT3-201ENST00000542680 P0C880 135 aa5.65□□□□□ -1.5
CACNA1C-IT3-201ENST00000542680 KRTAP10-10P60014 251 aa5.63□□□□□ -1.51
CACNA1C-IT3-201ENST00000542680 M0QZ58 72 aa5.6□□□□□ -1.51
CACNA1C-IT3-201ENST00000542680 A0A1B0GU33 70 aa5.59□□□□□ -1.51
CACNA1C-IT3-201ENST00000542680 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.51
CACNA1C-IT3-201ENST00000542680 LCE5AQ5TCM9 118 aa5.59□□□□□ -1.51
CACNA1C-IT3-201ENST00000542680 R4GN34 69 aa5.58□□□□□ -1.52
CACNA1C-IT3-201ENST00000542680 PSPHP1O15172 72 aa5.57□□□□□ -1.52
CACNA1C-IT3-201ENST00000542680 Q5VV11 94 aa5.55□□□□□ -1.52
CACNA1C-IT3-201ENST00000542680 SPRR2GQ9BYE4 73 aa5.55□□□□□ -1.52
CACNA1C-IT3-201ENST00000542680 UQCR11O14957 56 aa5.53□□□□□ -1.52
CACNA1C-IT3-201ENST00000542680 KRTAP5-9P26371 169 aa5.48□□□□□ -1.53
CACNA1C-IT3-201ENST00000542680 KRTAP13-4Q3LI77 160 aa5.47□□□□□ -1.53
CACNA1C-IT3-201ENST00000542680 A6NED7 52 aa5.44□□□□□ -1.54
CACNA1C-IT3-201ENST00000542680 A6NN06 94 aa5.44□□□□□ -1.54
CACNA1C-IT3-201ENST00000542680 SPATA8Q6RVD6 105 aa5.44□□□□□ -1.54
CACNA1C-IT3-201ENST00000542680 MIR22HGQ0VDD5 57 aa5.43□□□□□ -1.54
CACNA1C-IT3-201ENST00000542680 KRTAP19-8Q3LI54 63 aa5.42□□□□□ -1.54
CACNA1C-IT3-201ENST00000542680 KRTAP2-2Q9BYT5 123 aa5.42□□□□□ -1.54
CACNA1C-IT3-201ENST00000542680 KRTAP2-1Q9BYU5 128 aa5.42□□□□□ -1.54
CACNA1C-IT3-201ENST00000542680 KRTAP5-3Q6L8H2 238 aa5.41□□□□□ -1.54
CACNA1C-IT3-201ENST00000542680 LINC01554Q52M75 96 aa5.38□□□□□ -1.55
CACNA1C-IT3-201ENST00000542680 CDC42SE1Q9NRR8 79 aa5.36□□□□□ -1.55
CACNA1C-IT3-201ENST00000542680 A0A0D9SG42 100 aa5.34□□□□□ -1.55
CACNA1C-IT3-201ENST00000542680 A8MU10 97 aa5.33□□□□□ -1.56
CACNA1C-IT3-201ENST00000542680 MT1BP07438 61 aa5.32□□□□□ -1.56
CACNA1C-IT3-201ENST00000542680 PLAC4Q8WY50 150 aa5.31□□□□□ -1.56
CACNA1C-IT3-201ENST00000542680 KRTAP12-1P59990 96 aa5.29□□□□□ -1.56
CACNA1C-IT3-201ENST00000542680 K7ERS5 55 aa5.28□□□□□ -1.56
CACNA1C-IT3-201ENST00000542680 SPINT4Q6UDR6 99 aa5.25□□□□□ -1.57
CACNA1C-IT3-201ENST00000542680 KRTAP12-2P59991 146 aa5.24□□□□□ -1.57
CACNA1C-IT3-201ENST00000542680 BRK1Q8WUW1 75 aa5.23□□□□□ -1.57
CACNA1C-IT3-201ENST00000542680 SPRR2EP22531 72 aa5.21□□□□□ -1.58
CACNA1C-IT3-201ENST00000542680 SPRR2BP35325 72 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms