RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 MUC17Q685J3 4493 aa5.95□□□□□ -1.46
VTN-202ENST00000539746 CSAG1Q6PB30 78 aa5.93□□□□□ -1.46
VTN-202ENST00000539746 PRR15LQ9BU68 103 aa5.93□□□□□ -1.46
VTN-202ENST00000539746 UBR4Q5T4S7 5183 aa5.93□□□□□ -1.46
VTN-202ENST00000539746 LINC01558Q9Y6Z2 57 aa5.92□□□□□ -1.46
VTN-202ENST00000539746 PRO0628Q9UI54 55 aa5.91□□□□□ -1.46
VTN-202ENST00000539746 KRTAP3-1Q9BYR8 98 aa5.87□□□□□ -1.47
VTN-202ENST00000539746 PSPHP1O15172 72 aa5.86□□□□□ -1.47
VTN-202ENST00000539746 KRTAP4-1Q9BYQ7 146 aa5.85□□□□□ -1.47
VTN-202ENST00000539746 Q5VV11 94 aa5.84□□□□□ -1.47
VTN-202ENST00000539746 LCA10Q71F78 164 aa5.84□□□□□ -1.47
VTN-202ENST00000539746 BRK1Q8WUW1 75 aa5.84□□□□□ -1.47
VTN-202ENST00000539746 RNF213Q63HN8 5207 aa5.81□□□□□ -1.48
VTN-202ENST00000539746 A0A1B0GU69 56 aa5.8□□□□□ -1.48
VTN-202ENST00000539746 H0YAA0 97 aa5.79□□□□□ -1.48
VTN-202ENST00000539746 M0R2T5 61 aa5.79□□□□□ -1.48
VTN-202ENST00000539746 A6NED7 52 aa5.75□□□□□ -1.49
VTN-202ENST00000539746 CDC42SE1Q9NRR8 79 aa5.73□□□□□ -1.49
VTN-202ENST00000539746 MUC2Q02817 5179 aa5.71□□□□□ -1.5
VTN-202ENST00000539746 KRTAP19-2Q3LHN2 52 aa5.7□□□□□ -1.5
VTN-202ENST00000539746 KRTAP3-3Q9BYR6 98 aa5.7□□□□□ -1.5
VTN-202ENST00000539746 CRIPTQ9P021 101 aa5.68□□□□□ -1.5
VTN-202ENST00000539746 UQCR11O14957 56 aa5.65□□□□□ -1.5
VTN-202ENST00000539746 LCE2CQ5TA81 110 aa5.65□□□□□ -1.5
VTN-202ENST00000539746 MT1HP80294 61 aa5.64□□□□□ -1.51
VTN-202ENST00000539746 ADM2Q7Z4H4 148 aa5.63□□□□□ -1.51
VTN-202ENST00000539746 FLGP20930 4061 aaPredicted RBP5.62□□□□□ -1.51
VTN-202ENST00000539746 M0QZ58 72 aa5.62□□□□□ -1.51
VTN-202ENST00000539746 A0A1B0GU33 70 aa5.61□□□□□ -1.51
VTN-202ENST00000539746 SPATA8Q6RVD6 105 aa5.61□□□□□ -1.51
VTN-202ENST00000539746 R4GN34 69 aa5.57□□□□□ -1.52
VTN-202ENST00000539746 FAT4Q6V0I7 4981 aa5.57□□□□□ -1.52
VTN-202ENST00000539746 MIR22HGQ0VDD5 57 aa5.56□□□□□ -1.52
VTN-202ENST00000539746 PMAIP1Q13794 54 aa5.56□□□□□ -1.52
VTN-202ENST00000539746 K7ERS5 55 aa5.52□□□□□ -1.53
VTN-202ENST00000539746 A8MU10 97 aa5.49□□□□□ -1.53
VTN-202ENST00000539746 A6NN06 94 aa5.48□□□□□ -1.53
VTN-202ENST00000539746 KRTAP10-6P60371 365 aaPredicted RBP5.48□□□□□ -1.53
VTN-202ENST00000539746 KRTAP3-2Q9BYR7 98 aa5.48□□□□□ -1.53
VTN-202ENST00000539746 KRTAP10-10P60014 251 aa5.47□□□□□ -1.53
VTN-202ENST00000539746 LCE2AQ5TA79 106 aaPredicted RBP5.47□□□□□ -1.53
VTN-202ENST00000539746 P0C880 135 aa5.46□□□□□ -1.54
VTN-202ENST00000539746 KTN1-AS1Q86SY8 53 aa5.43□□□□□ -1.54
VTN-202ENST00000539746 LORP23490 312 aaPredicted RBP5.42□□□□□ -1.54
VTN-202ENST00000539746 MT2AP02795 61 aa5.38□□□□□ -1.55
VTN-202ENST00000539746 KRTAP9-8Q9BYQ0 159 aa5.38□□□□□ -1.55
VTN-202ENST00000539746 SPRR2GQ9BYE4 73 aa5.35□□□□□ -1.55
VTN-202ENST00000539746 LINC01554Q52M75 96 aa5.33□□□□□ -1.56
VTN-202ENST00000539746 MT1FP04733 61 aa5.31□□□□□ -1.56
VTN-202ENST00000539746 PLAC4Q8WY50 150 aa5.31□□□□□ -1.56
VTN-202ENST00000539746 A0A0D9SG42 100 aa5.29□□□□□ -1.56
VTN-202ENST00000539746 KRTAP13-4Q3LI77 160 aa5.25□□□□□ -1.57
VTN-202ENST00000539746 SPINT4Q6UDR6 99 aa5.25□□□□□ -1.57
VTN-202ENST00000539746 CAMK2N1Q7Z7J9 78 aa5.23□□□□□ -1.57
VTN-202ENST00000539746 KRTAP9-3Q9BYQ3 159 aa5.2□□□□□ -1.58
VTN-202ENST00000539746 KRTAP19-8Q3LI54 63 aa5.19□□□□□ -1.58
VTN-202ENST00000539746 KRTAP19-1Q8IUB9 90 aa5.19□□□□□ -1.58
VTN-202ENST00000539746 KRTAP9-2Q9BYQ4 174 aa5.19□□□□□ -1.58
VTN-202ENST00000539746 PRO2289Q9P1D8 64 aa5.18□□□□□ -1.58
VTN-202ENST00000539746 KRTAP12-1P59990 96 aa5.16□□□□□ -1.58
VTN-202ENST00000539746 LCE2DQ5TA82 110 aaPredicted RBP5.15□□□□□ -1.59
VTN-202ENST00000539746 ROMO1P60602 79 aa5.11□□□□□ -1.59
VTN-202ENST00000539746 KRTAP12-2P59991 146 aa5.1□□□□□ -1.59
VTN-202ENST00000539746 KRTAP9-6A0A140TA67 174 aa5.05□□□□□ -1.6
VTN-202ENST00000539746 PRAC1Q96KF2 57 aa5.05□□□□□ -1.6
VTN-202ENST00000539746 KRTAP25-1Q3LHN0 102 aa5.01□□□□□ -1.61
VTN-202ENST00000539746 FSIP2Q5CZC0 6907 aa5□□□□□ -1.61
VTN-202ENST00000539746 LCE2BO14633 110 aa5□□□□□ -1.61
VTN-202ENST00000539746 MT1BP07438 61 aa5□□□□□ -1.61
VTN-202ENST00000539746 TNP1P09430 55 aa4.97□□□□□ -1.61
VTN-202ENST00000539746 USH2AO75445 5202 aa4.89□□□□□ -1.63
VTN-202ENST00000539746 KRTAP10-5P60370 271 aa4.89□□□□□ -1.63
VTN-202ENST00000539746 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
VTN-202ENST00000539746 CRCT1Q9UGL9 99 aa4.89□□□□□ -1.63
VTN-202ENST00000539746 KRTAP19-6Q3LI70 58 aa4.88□□□□□ -1.63
VTN-202ENST00000539746 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
VTN-202ENST00000539746 MT1XP80297 61 aa4.84□□□□□ -1.63
VTN-202ENST00000539746 C10orf95Q9H7T3 257 aa4.84□□□□□ -1.63
VTN-202ENST00000539746 SSPOA2VEC9 5147 aa4.74□□□□□ -1.65
VTN-202ENST00000539746 KRTAP10-12P60413 245 aa4.72□□□□□ -1.65
VTN-202ENST00000539746 KRTAP10-7P60409 375 aaPredicted RBP4.59□□□□□ -1.67
VTN-202ENST00000539746 FCGBPQ9Y6R7 5405 aaPredicted RBP4.58□□□□□ -1.68
VTN-202ENST00000539746 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.55□□□□□ -1.68
VTN-202ENST00000539746 KRTAP8-1Q8IUC2 63 aa4.55□□□□□ -1.68
VTN-202ENST00000539746 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
VTN-202ENST00000539746 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
VTN-202ENST00000539746 KRTAP9-7A8MTY7 169 aa4.52□□□□□ -1.69
VTN-202ENST00000539746 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
VTN-202ENST00000539746 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
VTN-202ENST00000539746 MACF1Q9UPN3 7388 aaKnown RBP4.44□□□□□ -1.7
VTN-202ENST00000539746 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
VTN-202ENST00000539746 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
VTN-202ENST00000539746 KRTAP19-5Q3LI72 72 aa4.36□□□□□ -1.71
VTN-202ENST00000539746 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
VTN-202ENST00000539746 KRTAP6-3Q3LI67 103 aa4.33□□□□□ -1.72
VTN-202ENST00000539746 SPRR2FQ96RM1 72 aa4.32□□□□□ -1.72
VTN-202ENST00000539746 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
VTN-202ENST00000539746 KRTAP19-7Q3SYF9 63 aa4.3□□□□□ -1.72
VTN-202ENST00000539746 MT1EP04732 61 aa4.29□□□□□ -1.72
VTN-202ENST00000539746 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms