RNA–Protein interactions for RNA: ENST00000539458.1

SLC3A2-213, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-213ENST00000539458 SPANXA2-OT1Q8N9U9 137 aa8.51□□□□□ -1.05
SLC3A2-213ENST00000539458 A8MUN3 132 aa8.46□□□□□ -1.06
SLC3A2-213ENST00000539458 H7BZZ5 65 aa8.45□□□□□ -1.06
SLC3A2-213ENST00000539458 ATP5EP56381 51 aaPredicted RBP8.42□□□□□ -1.06
SLC3A2-213ENST00000539458 KRTAP9-8Q9BYQ0 159 aa8.41□□□□□ -1.06
SLC3A2-213ENST00000539458 KRTAP3-1Q9BYR8 98 aa8.41□□□□□ -1.06
SLC3A2-213ENST00000539458 TMEM258P61165 79 aa8.4□□□□□ -1.06
SLC3A2-213ENST00000539458 DMAC1Q96GE9 116 aa8.35□□□□□ -1.07
SLC3A2-213ENST00000539458 KRTAP9-7A8MTY7 169 aa8.34□□□□□ -1.07
SLC3A2-213ENST00000539458 MT2AP02795 61 aa8.34□□□□□ -1.07
SLC3A2-213ENST00000539458 ACYP2P14621 99 aa8.34□□□□□ -1.07
SLC3A2-213ENST00000539458 CYSTM1Q9H1C7 97 aa8.34□□□□□ -1.07
SLC3A2-213ENST00000539458 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.3□□□□□ -1.08
SLC3A2-213ENST00000539458 S4R3F8 94 aa8.3□□□□□ -1.08
SLC3A2-213ENST00000539458 MT1FP04733 61 aa8.27□□□□□ -1.09
SLC3A2-213ENST00000539458 LCA10Q71F78 164 aa8.25□□□□□ -1.09
SLC3A2-213ENST00000539458 KRTAP10-10P60014 251 aa8.23□□□□□ -1.09
SLC3A2-213ENST00000539458 CSAG1Q6PB30 78 aa8.19□□□□□ -1.1
SLC3A2-213ENST00000539458 SPTSSBQ8NFR3 76 aa8.19□□□□□ -1.1
SLC3A2-213ENST00000539458 CHKB-CPT1BH3BT56 60 aa8.17□□□□□ -1.1
SLC3A2-213ENST00000539458 KRTAP3-3Q9BYR6 98 aa8.16□□□□□ -1.1
SLC3A2-213ENST00000539458 KRTAP9-3Q9BYQ3 159 aa8.14□□□□□ -1.11
SLC3A2-213ENST00000539458 COA5Q86WW8 74 aa8.13□□□□□ -1.11
SLC3A2-213ENST00000539458 SERP1Q9Y6X1 66 aa8.13□□□□□ -1.11
SLC3A2-213ENST00000539458 RPS28P62857 69 aaKnown RBP8.06□□□□□ -1.12
SLC3A2-213ENST00000539458 USH2AO75445 5202 aa8.05□□□□□ -1.12
SLC3A2-213ENST00000539458 SSPOA2VEC9 5147 aa8.04□□□□□ -1.12
SLC3A2-213ENST00000539458 LCE2BO14633 110 aa8.02□□□□□ -1.13
SLC3A2-213ENST00000539458 KRTAP19-1Q8IUB9 90 aa8.01□□□□□ -1.13
SLC3A2-213ENST00000539458 FCGBPQ9Y6R7 5405 aaPredicted RBP7.96□□□□□ -1.14
SLC3A2-213ENST00000539458 H0YAA0 97 aa7.95□□□□□ -1.14
SLC3A2-213ENST00000539458 SMIM26A0A096LP01 95 aa7.9□□□□□ -1.14
SLC3A2-213ENST00000539458 V9GYY9 64 aa7.9□□□□□ -1.14
SLC3A2-213ENST00000539458 SEC61GP60059 68 aa7.87□□□□□ -1.15
SLC3A2-213ENST00000539458 ADM2Q7Z4H4 148 aa7.84□□□□□ -1.15
SLC3A2-213ENST00000539458 CRIPTQ9P021 101 aa7.84□□□□□ -1.15
SLC3A2-213ENST00000539458 SPRR2GQ9BYE4 73 aa7.83□□□□□ -1.16
SLC3A2-213ENST00000539458 PRR15LQ9BU68 103 aa7.81□□□□□ -1.16
SLC3A2-213ENST00000539458 LINC01558Q9Y6Z2 57 aa7.8□□□□□ -1.16
SLC3A2-213ENST00000539458 Q1T7F1 81 aa7.78□□□□□ -1.16
SLC3A2-213ENST00000539458 SYNE2Q8WXH0 6885 aaKnown RBP7.78□□□□□ -1.16
SLC3A2-213ENST00000539458 MACF1Q9UPN3 7388 aaKnown RBP7.78□□□□□ -1.16
SLC3A2-213ENST00000539458 KRTAP19-6Q3LI70 58 aa7.77□□□□□ -1.17
SLC3A2-213ENST00000539458 A0A1B0GU69 56 aa7.76□□□□□ -1.17
SLC3A2-213ENST00000539458 KRTAP19-8Q3LI54 63 aa7.73□□□□□ -1.17
SLC3A2-213ENST00000539458 P0C880 135 aa7.7□□□□□ -1.18
SLC3A2-213ENST00000539458 Q5VV11 94 aa7.7□□□□□ -1.18
SLC3A2-213ENST00000539458 KRTAP3-2Q9BYR7 98 aa7.7□□□□□ -1.18
SLC3A2-213ENST00000539458 MT1BP07438 61 aa7.68□□□□□ -1.18
SLC3A2-213ENST00000539458 KRTAP6-3Q3LI67 103 aa7.66□□□□□ -1.18
SLC3A2-213ENST00000539458 R4GN34 69 aa7.63□□□□□ -1.19
SLC3A2-213ENST00000539458 M0QZ58 72 aa7.6□□□□□ -1.19
SLC3A2-213ENST00000539458 A0A1B0GU33 70 aa7.58□□□□□ -1.2
SLC3A2-213ENST00000539458 UQCR11O14957 56 aa7.53□□□□□ -1.2
SLC3A2-213ENST00000539458 PSPHP1O15172 72 aa7.53□□□□□ -1.2
SLC3A2-213ENST00000539458 A6NN06 94 aa7.46□□□□□ -1.22
SLC3A2-213ENST00000539458 KRTAP10-5P60370 271 aa7.44□□□□□ -1.22
SLC3A2-213ENST00000539458 LINC01554Q52M75 96 aa7.43□□□□□ -1.22
SLC3A2-213ENST00000539458 PLAC4Q8WY50 150 aa7.42□□□□□ -1.22
SLC3A2-213ENST00000539458 A6NED7 52 aa7.39□□□□□ -1.23
SLC3A2-213ENST00000539458 MIR22HGQ0VDD5 57 aa7.37□□□□□ -1.23
SLC3A2-213ENST00000539458 SPATA8Q6RVD6 105 aa7.34□□□□□ -1.23
SLC3A2-213ENST00000539458 NEBP20929 6669 aa7.34□□□□□ -1.23
SLC3A2-213ENST00000539458 KRTAP13-4Q3LI77 160 aa7.33□□□□□ -1.24
SLC3A2-213ENST00000539458 KRTAP20-1Q3LI63 56 aa7.31□□□□□ -1.24
SLC3A2-213ENST00000539458 PRO2289Q9P1D8 64 aa7.3□□□□□ -1.24
SLC3A2-213ENST00000539458 MT1XP80297 61 aa7.28□□□□□ -1.24
SLC3A2-213ENST00000539458 CDC42SE1Q9NRR8 79 aa7.26□□□□□ -1.25
SLC3A2-213ENST00000539458 K7ERS5 55 aa7.23□□□□□ -1.25
SLC3A2-213ENST00000539458 A0A0D9SG42 100 aa7.21□□□□□ -1.26
SLC3A2-213ENST00000539458 MUC12Q9UKN1 5478 aa7.18□□□□□ -1.26
SLC3A2-213ENST00000539458 A8MU10 97 aa7.16□□□□□ -1.26
SLC3A2-213ENST00000539458 KRTAP5-9P26371 169 aa7.11□□□□□ -1.27
SLC3A2-213ENST00000539458 KRTAP12-1P59990 96 aa7.11□□□□□ -1.27
SLC3A2-213ENST00000539458 SPINT4Q6UDR6 99 aa7.11□□□□□ -1.27
SLC3A2-213ENST00000539458 BRK1Q8WUW1 75 aa7.11□□□□□ -1.27
SLC3A2-213ENST00000539458 KRTAP12-2P59991 146 aa7.06□□□□□ -1.28
SLC3A2-213ENST00000539458 CAMK2N1Q7Z7J9 78 aa7.06□□□□□ -1.28
SLC3A2-213ENST00000539458 KRTAP2-3P0C7H8 128 aa7.02□□□□□ -1.29
SLC3A2-213ENST00000539458 KRTAP2-4Q9BYR9 128 aa7.02□□□□□ -1.29
SLC3A2-213ENST00000539458 KMT2DO14686 5537 aa6.95□□□□□ -1.3
SLC3A2-213ENST00000539458 KRTAP10-7P60409 375 aaPredicted RBP6.95□□□□□ -1.3
SLC3A2-213ENST00000539458 PRO0628Q9UI54 55 aa6.93□□□□□ -1.3
SLC3A2-213ENST00000539458 KRTAP10-12P60413 245 aa6.92□□□□□ -1.3
SLC3A2-213ENST00000539458 MDN1Q9NU22 5596 aa6.92□□□□□ -1.3
SLC3A2-213ENST00000539458 SPRR2EP22531 72 aa6.88□□□□□ -1.31
SLC3A2-213ENST00000539458 SPRR2BP35325 72 aa6.88□□□□□ -1.31
SLC3A2-213ENST00000539458 SPRR2AP35326 72 aa6.88□□□□□ -1.31
SLC3A2-213ENST00000539458 SPRR2FQ96RM1 72 aa6.88□□□□□ -1.31
SLC3A2-213ENST00000539458 KRTAP8-1Q8IUC2 63 aa6.87□□□□□ -1.31
SLC3A2-213ENST00000539458 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
SLC3A2-213ENST00000539458 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
SLC3A2-213ENST00000539458 PMAIP1Q13794 54 aa6.77□□□□□ -1.33
SLC3A2-213ENST00000539458 KRTAP2-2Q9BYT5 123 aa6.77□□□□□ -1.33
SLC3A2-213ENST00000539458 KRTAP2-1Q9BYU5 128 aa6.77□□□□□ -1.33
SLC3A2-213ENST00000539458 ROMO1P60602 79 aa6.75□□□□□ -1.33
SLC3A2-213ENST00000539458 C10orf95Q9H7T3 257 aa6.71□□□□□ -1.34
SLC3A2-213ENST00000539458 TNP1P09430 55 aa6.7□□□□□ -1.34
SLC3A2-213ENST00000539458 KRTAP25-1Q3LHN0 102 aa6.68□□□□□ -1.34
SLC3A2-213ENST00000539458 SPRR2DP22532 72 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms