RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 ATP5EP56381 51 aaPredicted RBP7.95□□□□□ -1.14
VAMP1-207ENST00000539047 C4orf26Q17RF5 130 aa7.94□□□□□ -1.14
VAMP1-207ENST00000539047 FAM236DA0A1B0GTK5 79 aa7.91□□□□□ -1.14
VAMP1-207ENST00000539047 FAM236CP0DP71 79 aa7.91□□□□□ -1.14
VAMP1-207ENST00000539047 A8MUN3 132 aa7.9□□□□□ -1.14
VAMP1-207ENST00000539047 COX6B2Q6YFQ2 88 aa7.89□□□□□ -1.15
VAMP1-207ENST00000539047 KRTAP4-1Q9BYQ7 146 aa7.87□□□□□ -1.15
VAMP1-207ENST00000539047 DMAC1Q96GE9 116 aa7.86□□□□□ -1.15
VAMP1-207ENST00000539047 ACYP2P14621 99 aa7.84□□□□□ -1.15
VAMP1-207ENST00000539047 MPLKIPQ8TAP9 179 aa7.83□□□□□ -1.16
VAMP1-207ENST00000539047 KRTAP19-1Q8IUB9 90 aa7.82□□□□□ -1.16
VAMP1-207ENST00000539047 MUC17Q685J3 4493 aa7.82□□□□□ -1.16
VAMP1-207ENST00000539047 FAT4Q6V0I7 4981 aa7.78□□□□□ -1.16
VAMP1-207ENST00000539047 H1FX-AS1Q4G0G2 97 aa7.77□□□□□ -1.17
VAMP1-207ENST00000539047 CHKB-CPT1BH3BT56 60 aa7.76□□□□□ -1.17
VAMP1-207ENST00000539047 KRTAP4-7Q9BYR0 210 aa7.74□□□□□ -1.17
VAMP1-207ENST00000539047 KRTAP3-1Q9BYR8 98 aa7.72□□□□□ -1.17
VAMP1-207ENST00000539047 COA5Q86WW8 74 aa7.71□□□□□ -1.18
VAMP1-207ENST00000539047 S4R3F8 94 aa7.71□□□□□ -1.18
VAMP1-207ENST00000539047 SERP1Q9Y6X1 66 aa7.7□□□□□ -1.18
VAMP1-207ENST00000539047 SPTSSBQ8NFR3 76 aa7.69□□□□□ -1.18
VAMP1-207ENST00000539047 LCE1DQ5T752 114 aa7.63□□□□□ -1.19
VAMP1-207ENST00000539047 KRTAP19-2Q3LHN2 52 aa7.6□□□□□ -1.19
VAMP1-207ENST00000539047 LCA10Q71F78 164 aa7.6□□□□□ -1.19
VAMP1-207ENST00000539047 RPS28P62857 69 aaKnown RBP7.56□□□□□ -1.2
VAMP1-207ENST00000539047 CSAG1Q6PB30 78 aa7.55□□□□□ -1.2
VAMP1-207ENST00000539047 M0R2T5 61 aa7.51□□□□□ -1.21
VAMP1-207ENST00000539047 SMIM26A0A096LP01 95 aa7.47□□□□□ -1.21
VAMP1-207ENST00000539047 KRTAP4-9Q9BYQ8 210 aa7.47□□□□□ -1.21
VAMP1-207ENST00000539047 MT1HP80294 61 aa7.45□□□□□ -1.22
VAMP1-207ENST00000539047 V9GYY9 64 aa7.44□□□□□ -1.22
VAMP1-207ENST00000539047 SEC61GP60059 68 aa7.43□□□□□ -1.22
VAMP1-207ENST00000539047 KRTAP4-2Q9BYR5 136 aa7.42□□□□□ -1.22
VAMP1-207ENST00000539047 PRR15LQ9BU68 103 aa7.38□□□□□ -1.23
VAMP1-207ENST00000539047 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
VAMP1-207ENST00000539047 A0A1B0GU69 56 aa7.36□□□□□ -1.23
VAMP1-207ENST00000539047 H0YAA0 97 aa7.34□□□□□ -1.23
VAMP1-207ENST00000539047 LINC01558Q9Y6Z2 57 aa7.34□□□□□ -1.23
VAMP1-207ENST00000539047 Q1T7F1 81 aa7.33□□□□□ -1.24
VAMP1-207ENST00000539047 ADM2Q7Z4H4 148 aa7.3□□□□□ -1.24
VAMP1-207ENST00000539047 FLGP20930 4061 aaPredicted RBP7.28□□□□□ -1.24
VAMP1-207ENST00000539047 FSIP2Q5CZC0 6907 aa7.26□□□□□ -1.25
VAMP1-207ENST00000539047 KRTAP10-6P60371 365 aaPredicted RBP7.22□□□□□ -1.25
VAMP1-207ENST00000539047 PSPHP1O15172 72 aa7.21□□□□□ -1.26
VAMP1-207ENST00000539047 P0C880 135 aa7.16□□□□□ -1.26
VAMP1-207ENST00000539047 A0A1B0GU33 70 aa7.15□□□□□ -1.26
VAMP1-207ENST00000539047 KRTAP10-10P60014 251 aa7.13□□□□□ -1.27
VAMP1-207ENST00000539047 KRTAP4-11Q9BYQ6 195 aa7.13□□□□□ -1.27
VAMP1-207ENST00000539047 CRIPTQ9P021 101 aa7.13□□□□□ -1.27
VAMP1-207ENST00000539047 MT2AP02795 61 aa7.12□□□□□ -1.27
VAMP1-207ENST00000539047 Q5VV11 94 aa7.11□□□□□ -1.27
VAMP1-207ENST00000539047 KRTAP9-8Q9BYQ0 159 aa7.11□□□□□ -1.27
VAMP1-207ENST00000539047 R4GN34 69 aa7.11□□□□□ -1.27
VAMP1-207ENST00000539047 UQCR11O14957 56 aa7.1□□□□□ -1.27
VAMP1-207ENST00000539047 M0QZ58 72 aa7.08□□□□□ -1.28
VAMP1-207ENST00000539047 A6NED7 52 aa7.06□□□□□ -1.28
VAMP1-207ENST00000539047 MT1FP04733 61 aa7.05□□□□□ -1.28
VAMP1-207ENST00000539047 MIR22HGQ0VDD5 57 aa6.98□□□□□ -1.29
VAMP1-207ENST00000539047 SPATA8Q6RVD6 105 aa6.97□□□□□ -1.29
VAMP1-207ENST00000539047 KRTAP9-7A8MTY7 169 aa6.94□□□□□ -1.3
VAMP1-207ENST00000539047 LINC01554Q52M75 96 aa6.94□□□□□ -1.3
VAMP1-207ENST00000539047 KRTAP13-4Q3LI77 160 aa6.93□□□□□ -1.3
VAMP1-207ENST00000539047 LCE4AQ5TA78 99 aa6.93□□□□□ -1.3
VAMP1-207ENST00000539047 SPRR2GQ9BYE4 73 aa6.92□□□□□ -1.3
VAMP1-207ENST00000539047 KRTAP5-3Q6L8H2 238 aa6.9□□□□□ -1.3
VAMP1-207ENST00000539047 A0A0D9SG42 100 aa6.89□□□□□ -1.31
VAMP1-207ENST00000539047 CDC42SE1Q9NRR8 79 aa6.88□□□□□ -1.31
VAMP1-207ENST00000539047 KRTAP9-3Q9BYQ3 159 aa6.86□□□□□ -1.31
VAMP1-207ENST00000539047 BRK1Q8WUW1 75 aa6.84□□□□□ -1.31
VAMP1-207ENST00000539047 A8MU10 97 aa6.83□□□□□ -1.32
VAMP1-207ENST00000539047 K7ERS5 55 aa6.83□□□□□ -1.32
VAMP1-207ENST00000539047 USH2AO75445 5202 aa6.81□□□□□ -1.32
VAMP1-207ENST00000539047 A6NN06 94 aa6.81□□□□□ -1.32
VAMP1-207ENST00000539047 SSPOA2VEC9 5147 aa6.79□□□□□ -1.32
VAMP1-207ENST00000539047 SPINT4Q6UDR6 99 aa6.77□□□□□ -1.33
VAMP1-207ENST00000539047 PLAC4Q8WY50 150 aa6.77□□□□□ -1.33
VAMP1-207ENST00000539047 KRTAP19-8Q3LI54 63 aa6.75□□□□□ -1.33
VAMP1-207ENST00000539047 LCE5AQ5TCM9 118 aa6.74□□□□□ -1.33
VAMP1-207ENST00000539047 KRTAP12-1P59990 96 aa6.71□□□□□ -1.34
VAMP1-207ENST00000539047 KRTAP12-2P59991 146 aa6.67□□□□□ -1.34
VAMP1-207ENST00000539047 CAMK2N1Q7Z7J9 78 aa6.67□□□□□ -1.34
VAMP1-207ENST00000539047 FCGBPQ9Y6R7 5405 aaPredicted RBP6.64□□□□□ -1.35
VAMP1-207ENST00000539047 MT1BP07438 61 aa6.63□□□□□ -1.35
VAMP1-207ENST00000539047 PRO0628Q9UI54 55 aa6.59□□□□□ -1.35
VAMP1-207ENST00000539047 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
VAMP1-207ENST00000539047 PMAIP1Q13794 54 aa6.46□□□□□ -1.38
VAMP1-207ENST00000539047 MACF1Q9UPN3 7388 aaKnown RBP6.42□□□□□ -1.38
VAMP1-207ENST00000539047 KRTAP19-6Q3LI70 58 aa6.41□□□□□ -1.38
VAMP1-207ENST00000539047 ROMO1P60602 79 aa6.4□□□□□ -1.38
VAMP1-207ENST00000539047 MT1XP80297 61 aa6.39□□□□□ -1.39
VAMP1-207ENST00000539047 KRTAP10-5P60370 271 aa6.38□□□□□ -1.39
VAMP1-207ENST00000539047 KRTAP19-4Q3LI73 84 aa6.37□□□□□ -1.39
VAMP1-207ENST00000539047 SYNE2Q8WXH0 6885 aaKnown RBP6.36□□□□□ -1.39
VAMP1-207ENST00000539047 C10orf95Q9H7T3 257 aa6.33□□□□□ -1.4
VAMP1-207ENST00000539047 TNP1P09430 55 aa6.3□□□□□ -1.4
VAMP1-207ENST00000539047 KRTAP25-1Q3LHN0 102 aa6.27□□□□□ -1.41
VAMP1-207ENST00000539047 KRTAP6-3Q3LI67 103 aa6.26□□□□□ -1.41
VAMP1-207ENST00000539047 KTN1-AS1Q86SY8 53 aa6.15□□□□□ -1.42
VAMP1-207ENST00000539047 KRTAP10-7P60409 375 aaPredicted RBP6.11□□□□□ -1.43
VAMP1-207ENST00000539047 KRTAP10-12P60413 245 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms