RNA–Protein interactions for RNA: ENST00000538144.5

PXN-208, Transcript of paxillin, humanhuman

TSL 1 (best)

Gene PXN, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-208ENST00000538144 A6NED7 52 aa7.85□□□□□ -1.15
PXN-208ENST00000538144 PMAIP1Q13794 54 aa7.8□□□□□ -1.16
PXN-208ENST00000538144 CDC42SE1Q9NRR8 79 aa7.78□□□□□ -1.16
PXN-208ENST00000538144 MUC17Q685J3 4493 aa7.78□□□□□ -1.16
PXN-208ENST00000538144 LCA10Q71F78 164 aa7.78□□□□□ -1.16
PXN-208ENST00000538144 KRTAP4-1Q9BYQ7 146 aa7.76□□□□□ -1.17
PXN-208ENST00000538144 A8MU10 97 aa7.75□□□□□ -1.17
PXN-208ENST00000538144 SPTSSBQ8NFR3 76 aa7.72□□□□□ -1.17
PXN-208ENST00000538144 KRTAP3-1Q9BYR8 98 aa7.71□□□□□ -1.17
PXN-208ENST00000538144 COX6B2Q6YFQ2 88 aa7.71□□□□□ -1.18
PXN-208ENST00000538144 RBM12B-AS1Q9P1G2 102 aa7.64□□□□□ -1.19
PXN-208ENST00000538144 A0A1B0GU69 56 aa7.64□□□□□ -1.19
PXN-208ENST00000538144 A6NN06 94 aa7.62□□□□□ -1.19
PXN-208ENST00000538144 KTN1-AS1Q86SY8 53 aa7.62□□□□□ -1.19
PXN-208ENST00000538144 MUC2Q02817 5179 aa7.61□□□□□ -1.19
PXN-208ENST00000538144 UBR4Q5T4S7 5183 aa7.59□□□□□ -1.19
PXN-208ENST00000538144 SEC61GP60059 68 aa7.56□□□□□ -1.2
PXN-208ENST00000538144 H1FX-AS1Q4G0G2 97 aa7.55□□□□□ -1.2
PXN-208ENST00000538144 SPATA8Q6RVD6 105 aa7.54□□□□□ -1.2
PXN-208ENST00000538144 RNF213Q63HN8 5207 aa7.51□□□□□ -1.21
PXN-208ENST00000538144 KRTAP19-2Q3LHN2 52 aa7.51□□□□□ -1.21
PXN-208ENST00000538144 UQCR11O14957 56 aa7.5□□□□□ -1.21
PXN-208ENST00000538144 S4R3F8 94 aa7.48□□□□□ -1.21
PXN-208ENST00000538144 MIR22HGQ0VDD5 57 aa7.46□□□□□ -1.21
PXN-208ENST00000538144 KRTAP3-3Q9BYR6 98 aa7.43□□□□□ -1.22
PXN-208ENST00000538144 LCE2CQ5TA81 110 aa7.38□□□□□ -1.23
PXN-208ENST00000538144 H0YAA0 97 aa7.33□□□□□ -1.24
PXN-208ENST00000538144 FLGP20930 4061 aaPredicted RBP7.32□□□□□ -1.24
PXN-208ENST00000538144 A0A1B0GU33 70 aa7.31□□□□□ -1.24
PXN-208ENST00000538144 CSAG1Q6PB30 78 aa7.31□□□□□ -1.24
PXN-208ENST00000538144 FAT4Q6V0I7 4981 aa7.27□□□□□ -1.25
PXN-208ENST00000538144 KRTAP10-6P60371 365 aaPredicted RBP7.27□□□□□ -1.25
PXN-208ENST00000538144 KRTAP3-2Q9BYR7 98 aa7.27□□□□□ -1.25
PXN-208ENST00000538144 MT1HP80294 61 aa7.24□□□□□ -1.25
PXN-208ENST00000538144 M0R2T5 61 aa7.19□□□□□ -1.26
PXN-208ENST00000538144 PRAC1Q96KF2 57 aa7.19□□□□□ -1.26
PXN-208ENST00000538144 ADM2Q7Z4H4 148 aa7.17□□□□□ -1.26
PXN-208ENST00000538144 KRTAP13-4Q3LI77 160 aa7.12□□□□□ -1.27
PXN-208ENST00000538144 P0C880 135 aa7.11□□□□□ -1.27
PXN-208ENST00000538144 K7ERS5 55 aa7.05□□□□□ -1.28
PXN-208ENST00000538144 LINC01554Q52M75 96 aa7.05□□□□□ -1.28
PXN-208ENST00000538144 LCE2AQ5TA79 106 aaPredicted RBP7□□□□□ -1.29
PXN-208ENST00000538144 LORP23490 312 aaPredicted RBP6.98□□□□□ -1.29
PXN-208ENST00000538144 KRTAP9-8Q9BYQ0 159 aa6.96□□□□□ -1.3
PXN-208ENST00000538144 M0QZ58 72 aa6.93□□□□□ -1.3
PXN-208ENST00000538144 MT2AP02795 61 aa6.93□□□□□ -1.3
PXN-208ENST00000538144 A0A0D9SG42 100 aa6.92□□□□□ -1.3
PXN-208ENST00000538144 MT1FP04733 61 aa6.9□□□□□ -1.31
PXN-208ENST00000538144 KRTAP25-1Q3LHN0 102 aa6.9□□□□□ -1.31
PXN-208ENST00000538144 R4GN34 69 aa6.9□□□□□ -1.31
PXN-208ENST00000538144 KRTAP10-10P60014 251 aa6.89□□□□□ -1.31
PXN-208ENST00000538144 KRTAP12-1P59990 96 aa6.85□□□□□ -1.31
PXN-208ENST00000538144 KRTAP12-2P59991 146 aa6.84□□□□□ -1.31
PXN-208ENST00000538144 CRIPTQ9P021 101 aa6.83□□□□□ -1.32
PXN-208ENST00000538144 ROMO1P60602 79 aa6.83□□□□□ -1.32
PXN-208ENST00000538144 KRTAP19-1Q8IUB9 90 aa6.73□□□□□ -1.33
PXN-208ENST00000538144 SPRR2GQ9BYE4 73 aa6.73□□□□□ -1.33
PXN-208ENST00000538144 SPINT4Q6UDR6 99 aa6.71□□□□□ -1.34
PXN-208ENST00000538144 KRTAP9-3Q9BYQ3 159 aa6.71□□□□□ -1.34
PXN-208ENST00000538144 KRTAP19-8Q3LI54 63 aa6.56□□□□□ -1.36
PXN-208ENST00000538144 LCE2BO14633 110 aa6.55□□□□□ -1.36
PXN-208ENST00000538144 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
PXN-208ENST00000538144 MT1BP07438 61 aa6.5□□□□□ -1.37
PXN-208ENST00000538144 C10orf95Q9H7T3 257 aa6.49□□□□□ -1.37
PXN-208ENST00000538144 CAMK2N1Q7Z7J9 78 aa6.46□□□□□ -1.38
PXN-208ENST00000538144 USH2AO75445 5202 aa6.38□□□□□ -1.39
PXN-208ENST00000538144 LCE2DQ5TA82 110 aaPredicted RBP6.36□□□□□ -1.39
PXN-208ENST00000538144 H3BS24 57 aa6.34□□□□□ -1.4
PXN-208ENST00000538144 MT1XP80297 61 aa6.27□□□□□ -1.41
PXN-208ENST00000538144 KRTAP10-5P60370 271 aa6.27□□□□□ -1.41
PXN-208ENST00000538144 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
PXN-208ENST00000538144 KRTAP9-2Q9BYQ4 174 aa6.2□□□□□ -1.42
PXN-208ENST00000538144 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
PXN-208ENST00000538144 FSIP2Q5CZC0 6907 aa6.19□□□□□ -1.42
PXN-208ENST00000538144 PP632Q6XCG6 107 aa6.18□□□□□ -1.42
PXN-208ENST00000538144 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
PXN-208ENST00000538144 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
PXN-208ENST00000538144 KRTAP19-6Q3LI70 58 aa6.13□□□□□ -1.43
PXN-208ENST00000538144 TNP1P09430 55 aa6.12□□□□□ -1.43
PXN-208ENST00000538144 NDUFAF8A1L188 74 aa6.06□□□□□ -1.44
PXN-208ENST00000538144 KRTAP10-7P60409 375 aaPredicted RBP6.04□□□□□ -1.44
PXN-208ENST00000538144 CRCT1Q9UGL9 99 aa5.96□□□□□ -1.46
PXN-208ENST00000538144 FCGBPQ9Y6R7 5405 aaPredicted RBP5.93□□□□□ -1.46
PXN-208ENST00000538144 KRTAP10-12P60413 245 aa5.93□□□□□ -1.46
PXN-208ENST00000538144 LCE3AQ5TA76 89 aa5.89□□□□□ -1.47
PXN-208ENST00000538144 KRTAP4-8A0A0G2JLE6 195 aa5.85□□□□□ -1.47
PXN-208ENST00000538144 KMT2DO14686 5537 aa5.85□□□□□ -1.47
PXN-208ENST00000538144 KRTAP4-8Q9BYQ9 185 aa5.85□□□□□ -1.47
PXN-208ENST00000538144 LUZP6Q538Z0 58 aa5.8□□□□□ -1.48
PXN-208ENST00000538144 KRTAP8-1Q8IUC2 63 aa5.79□□□□□ -1.48
PXN-208ENST00000538144 SPRR5A0A1B0GTR4 108 aa5.74□□□□□ -1.49
PXN-208ENST00000538144 KRTAP9-6A0A140TA67 174 aa5.73□□□□□ -1.49
PXN-208ENST00000538144 KRTAP19-5Q3LI72 72 aa5.67□□□□□ -1.5
PXN-208ENST00000538144 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
PXN-208ENST00000538144 MACF1Q9UPN3 7388 aaKnown RBP5.62□□□□□ -1.51
PXN-208ENST00000538144 KRTAP19-7Q3SYF9 63 aa5.6□□□□□ -1.51
PXN-208ENST00000538144 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.52□□□□□ -1.53
PXN-208ENST00000538144 SYNE2Q8WXH0 6885 aaKnown RBP5.51□□□□□ -1.53
PXN-208ENST00000538144 A0A0A0MQY5 61 aa5.51□□□□□ -1.53
PXN-208ENST00000538144 MT1EP04732 61 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms