RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 LCA10Q71F78 164 aa10.46□□□□□ -0.73
VPS51-212ENST00000533656 DMAC1Q96GE9 116 aa10.45□□□□□ -0.74
VPS51-212ENST00000533656 SSPOA2VEC9 5147 aa10.45□□□□□ -0.74
VPS51-212ENST00000533656 ANAPC13Q9BS18 74 aa10.44□□□□□ -0.74
VPS51-212ENST00000533656 KRTAP9-8Q9BYQ0 159 aa10.43□□□□□ -0.74
VPS51-212ENST00000533656 CSAG1Q6PB30 78 aa10.42□□□□□ -0.74
VPS51-212ENST00000533656 SPANXA2-OT1Q8N9U9 137 aa10.39□□□□□ -0.75
VPS51-212ENST00000533656 NDUFC1O43677 76 aa10.35□□□□□ -0.75
VPS51-212ENST00000533656 MT2AP02795 61 aa10.34□□□□□ -0.75
VPS51-212ENST00000533656 KRTAP3-3Q9BYR6 98 aa10.34□□□□□ -0.75
VPS51-212ENST00000533656 ACYP2P14621 99 aa10.33□□□□□ -0.76
VPS51-212ENST00000533656 MT1FP04733 61 aa10.25□□□□□ -0.77
VPS51-212ENST00000533656 KRTAP10-10P60014 251 aa10.25□□□□□ -0.77
VPS51-212ENST00000533656 H7BZZ5 65 aa10.21□□□□□ -0.77
VPS51-212ENST00000533656 FCGBPQ9Y6R7 5405 aaPredicted RBP10.17□□□□□ -0.78
VPS51-212ENST00000533656 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.16□□□□□ -0.78
VPS51-212ENST00000533656 CCDC179H3BU77 68 aa10.16□□□□□ -0.78
VPS51-212ENST00000533656 CYSTM1Q9H1C7 97 aa10.16□□□□□ -0.78
VPS51-212ENST00000533656 H0YAA0 97 aa10.14□□□□□ -0.79
VPS51-212ENST00000533656 SPTSSBQ8NFR3 76 aa10.14□□□□□ -0.79
VPS51-212ENST00000533656 CHKB-CPT1BH3BT56 60 aa10.13□□□□□ -0.79
VPS51-212ENST00000533656 LCE2BO14633 110 aa10.1□□□□□ -0.79
VPS51-212ENST00000533656 KRTAP9-3Q9BYQ3 159 aa10.1□□□□□ -0.79
VPS51-212ENST00000533656 KRTAP9-7A8MTY7 169 aa10.08□□□□□ -0.8
VPS51-212ENST00000533656 COA5Q86WW8 74 aa10.01□□□□□ -0.81
VPS51-212ENST00000533656 KRTAP19-1Q8IUB9 90 aa10□□□□□ -0.81
VPS51-212ENST00000533656 ATP5EP56381 51 aaPredicted RBP9.99□□□□□ -0.81
VPS51-212ENST00000533656 ADM2Q7Z4H4 148 aa9.97□□□□□ -0.81
VPS51-212ENST00000533656 CRIPTQ9P021 101 aa9.97□□□□□ -0.81
VPS51-212ENST00000533656 TMEM258P61165 79 aa9.9□□□□□ -0.82
VPS51-212ENST00000533656 MACF1Q9UPN3 7388 aaKnown RBP9.87□□□□□ -0.83
VPS51-212ENST00000533656 SYNE2Q8WXH0 6885 aaKnown RBP9.86□□□□□ -0.83
VPS51-212ENST00000533656 SPRR2GQ9BYE4 73 aa9.85□□□□□ -0.83
VPS51-212ENST00000533656 KRTAP3-2Q9BYR7 98 aa9.81□□□□□ -0.84
VPS51-212ENST00000533656 P0C880 135 aa9.79□□□□□ -0.84
VPS51-212ENST00000533656 KRTAP19-6Q3LI70 58 aa9.73□□□□□ -0.85
VPS51-212ENST00000533656 R4GN34 69 aa9.71□□□□□ -0.86
VPS51-212ENST00000533656 KRTAP19-8Q3LI54 63 aa9.69□□□□□ -0.86
VPS51-212ENST00000533656 SEC61GP60059 68 aa9.68□□□□□ -0.86
VPS51-212ENST00000533656 PCP4P48539 62 aa9.66□□□□□ -0.86
VPS51-212ENST00000533656 Q5VV11 94 aa9.66□□□□□ -0.86
VPS51-212ENST00000533656 M0QZ58 72 aa9.63□□□□□ -0.87
VPS51-212ENST00000533656 SERP1Q9Y6X1 66 aa9.63□□□□□ -0.87
VPS51-212ENST00000533656 MT1BP07438 61 aa9.57□□□□□ -0.88
VPS51-212ENST00000533656 A0A1B0GU69 56 aa9.5□□□□□ -0.89
VPS51-212ENST00000533656 PRR15LQ9BU68 103 aa9.44□□□□□ -0.9
VPS51-212ENST00000533656 LINC01554Q52M75 96 aa9.43□□□□□ -0.9
VPS51-212ENST00000533656 LINC01558Q9Y6Z2 57 aa9.43□□□□□ -0.9
VPS51-212ENST00000533656 A0A1B0GU33 70 aa9.41□□□□□ -0.9
VPS51-212ENST00000533656 PLAC4Q8WY50 150 aa9.4□□□□□ -0.9
VPS51-212ENST00000533656 KRTAP6-3Q3LI67 103 aa9.37□□□□□ -0.91
VPS51-212ENST00000533656 KRTAP13-4Q3LI77 160 aa9.36□□□□□ -0.91
VPS51-212ENST00000533656 A6NN06 94 aa9.35□□□□□ -0.91
VPS51-212ENST00000533656 V9GYY9 64 aa9.29□□□□□ -0.92
VPS51-212ENST00000533656 NEBP20929 6669 aa9.27□□□□□ -0.93
VPS51-212ENST00000533656 KRTAP10-5P60370 271 aa9.27□□□□□ -0.93
VPS51-212ENST00000533656 RPS28P62857 69 aaKnown RBP9.26□□□□□ -0.93
VPS51-212ENST00000533656 SMIM26A0A096LP01 95 aa9.23□□□□□ -0.93
VPS51-212ENST00000533656 SPATA8Q6RVD6 105 aa9.23□□□□□ -0.93
VPS51-212ENST00000533656 PRO2289Q9P1D8 64 aa9.21□□□□□ -0.94
VPS51-212ENST00000533656 MUC12Q9UKN1 5478 aa9.21□□□□□ -0.94
VPS51-212ENST00000533656 Q1T7F1 81 aa9.2□□□□□ -0.94
VPS51-212ENST00000533656 A0A0D9SG42 100 aa9.15□□□□□ -0.94
VPS51-212ENST00000533656 MT1XP80297 61 aa9.12□□□□□ -0.95
VPS51-212ENST00000533656 UQCR11O14957 56 aa9.11□□□□□ -0.95
VPS51-212ENST00000533656 PSPHP1O15172 72 aa9.03□□□□□ -0.96
VPS51-212ENST00000533656 CAMK2N1Q7Z7J9 78 aa9.02□□□□□ -0.97
VPS51-212ENST00000533656 KRTAP12-1P59990 96 aa9.01□□□□□ -0.97
VPS51-212ENST00000533656 SPINT4Q6UDR6 99 aa9.01□□□□□ -0.97
VPS51-212ENST00000533656 A8MU10 97 aa9□□□□□ -0.97
VPS51-212ENST00000533656 MDN1Q9NU22 5596 aa8.98□□□□□ -0.97
VPS51-212ENST00000533656 KMT2DO14686 5537 aa8.96□□□□□ -0.98
VPS51-212ENST00000533656 KRTAP12-2P59991 146 aa8.93□□□□□ -0.98
VPS51-212ENST00000533656 MIR22HGQ0VDD5 57 aa8.93□□□□□ -0.98
VPS51-212ENST00000533656 KRTAP5-9P26371 169 aa8.87□□□□□ -0.99
VPS51-212ENST00000533656 A6NED7 52 aa8.81□□□□□ -1
VPS51-212ENST00000533656 KRTAP20-1Q3LI63 56 aa8.8□□□□□ -1
VPS51-212ENST00000533656 K7ERS5 55 aa8.72□□□□□ -1.01
VPS51-212ENST00000533656 KRTAP10-7P60409 375 aaPredicted RBP8.69□□□□□ -1.02
VPS51-212ENST00000533656 KRTAP10-12P60413 245 aa8.69□□□□□ -1.02
VPS51-212ENST00000533656 CDC42SE1Q9NRR8 79 aa8.57□□□□□ -1.04
VPS51-212ENST00000533656 SPRR2FQ96RM1 72 aa8.56□□□□□ -1.04
VPS51-212ENST00000533656 KRTAP8-1Q8IUC2 63 aa8.54□□□□□ -1.04
VPS51-212ENST00000533656 C10orf95Q9H7T3 257 aa8.54□□□□□ -1.04
VPS51-212ENST00000533656 KRTAP4-8A0A0G2JLE6 195 aa8.49□□□□□ -1.05
VPS51-212ENST00000533656 SPRR2EP22531 72 aa8.49□□□□□ -1.05
VPS51-212ENST00000533656 SPRR2BP35325 72 aa8.49□□□□□ -1.05
VPS51-212ENST00000533656 SPRR2AP35326 72 aa8.49□□□□□ -1.05
VPS51-212ENST00000533656 KRTAP4-8Q9BYQ9 185 aa8.49□□□□□ -1.05
VPS51-212ENST00000533656 TNP1P09430 55 aa8.48□□□□□ -1.05
VPS51-212ENST00000533656 KRTAP2-3P0C7H8 128 aa8.48□□□□□ -1.05
VPS51-212ENST00000533656 KRTAP2-4Q9BYR9 128 aa8.48□□□□□ -1.05
VPS51-212ENST00000533656 LCE1AQ5T7P2 110 aa8.36□□□□□ -1.07
VPS51-212ENST00000533656 KRTAP25-1Q3LHN0 102 aa8.3□□□□□ -1.08
VPS51-212ENST00000533656 SPRR2DP22532 72 aa8.2□□□□□ -1.1
VPS51-212ENST00000533656 BRK1Q8WUW1 75 aa8.19□□□□□ -1.1
VPS51-212ENST00000533656 KRTAP2-2Q9BYT5 123 aa8.19□□□□□ -1.1
VPS51-212ENST00000533656 KRTAP2-1Q9BYU5 128 aa8.19□□□□□ -1.1
VPS51-212ENST00000533656 ROMO1P60602 79 aa8.18□□□□□ -1.1
VPS51-212ENST00000533656 LCE3AQ5TA76 89 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms