RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243		A8MUN3	132 aa		10.35	□□□□□ -0.75
PABPC4-225	ENST00000531243		S4R3F8	94 aa		10.34	□□□□□ -0.75
PABPC4-225	ENST00000531243	LCE3B	Q5TA77	95 aa		10.3	□□□□□ -0.76
PABPC4-225	ENST00000531243	KRTAP19-1	Q8IUB9	90 aa		10.25	□□□□□ -0.77
PABPC4-225	ENST00000531243	C20orf197	Q8N268	126 aa		10.24	□□□□□ -0.77
PABPC4-225	ENST00000531243	SNURF	Q9Y675	71 aa		10.23	□□□□□ -0.77
PABPC4-225	ENST00000531243	CSAG1	Q6PB30	78 aa		10.22	□□□□□ -0.77
PABPC4-225	ENST00000531243	LCA10	Q71F78	164 aa		10.22	□□□□□ -0.77
PABPC4-225	ENST00000531243	COX7C	P15954	63 aa		10.21	□□□□□ -0.77
PABPC4-225	ENST00000531243	KRTAP9-8	Q9BYQ0	159 aa		10.19	□□□□□ -0.78
PABPC4-225	ENST00000531243	DMAC1	Q96GE9	116 aa		10.17	□□□□□ -0.78
PABPC4-225	ENST00000531243	NDUFC1	O43677	76 aa		10.14	□□□□□ -0.79
PABPC4-225	ENST00000531243	ANAPC13	Q9BS18	74 aa		10.14	□□□□□ -0.79
PABPC4-225	ENST00000531243	KRTAP9-9	Q9BYP9	154 aa		10.12	□□□□□ -0.79
PABPC4-225	ENST00000531243	KRTAP9-4	Q9BYQ2	154 aa		10.12	□□□□□ -0.79
PABPC4-225	ENST00000531243	MT2A	P02795	61 aa		10.11	□□□□□ -0.79
PABPC4-225	ENST00000531243	ACYP2	P14621	99 aa		10.09	□□□□□ -0.79
PABPC4-225	ENST00000531243	KRTAP10-10	P60014	251 aa		10.09	□□□□□ -0.79
PABPC4-225	ENST00000531243	SPANXA2-OT1	Q8N9U9	137 aa		10.08	□□□□□ -0.8
PABPC4-225	ENST00000531243	MT1F	P04733	61 aa		10.02	□□□□□ -0.81
PABPC4-225	ENST00000531243	CHKB-CPT1B	H3BT56	60 aa		9.93	□□□□□ -0.82
PABPC4-225	ENST00000531243	SPTSSB	Q8NFR3	76 aa		9.93	□□□□□ -0.82
PABPC4-225	ENST00000531243	KRTAP4-8	A0A0G2JLE6	195 aa		9.9	□□□□□ -0.82
PABPC4-225	ENST00000531243		H0YAA0	97 aa		9.89	□□□□□ -0.83
PABPC4-225	ENST00000531243		H7BZZ5	65 aa		9.88	□□□□□ -0.83
PABPC4-225	ENST00000531243	KRTAP9-3	Q9BYQ3	159 aa		9.86	□□□□□ -0.83
PABPC4-225	ENST00000531243	CCDC179	H3BU77	68 aa		9.84	□□□□□ -0.83
PABPC4-225	ENST00000531243	CYSTM1	Q9H1C7	97 aa		9.82	□□□□□ -0.84
PABPC4-225	ENST00000531243	ADM2	Q7Z4H4	148 aa		9.76	□□□□□ -0.85
PABPC4-225	ENST00000531243	CRIPT	Q9P021	101 aa		9.76	□□□□□ -0.85
PABPC4-225	ENST00000531243	COA5	Q86WW8	74 aa		9.73	□□□□□ -0.85
PABPC4-225	ENST00000531243	ATP5E	P56381	51 aa	Predicted RBP	9.69	□□□□□ -0.86
PABPC4-225	ENST00000531243	LCE1D	Q5T752	114 aa		9.63	□□□□□ -0.87
PABPC4-225	ENST00000531243	SPRR2G	Q9BYE4	73 aa		9.61	□□□□□ -0.87
PABPC4-225	ENST00000531243	CRCT1	Q9UGL9	99 aa		9.61	□□□□□ -0.87
PABPC4-225	ENST00000531243	TMEM258	P61165	79 aa		9.59	□□□□□ -0.87
PABPC4-225	ENST00000531243	KRTAP4-7	Q9BYR0	210 aa		9.55	□□□□□ -0.88
PABPC4-225	ENST00000531243		P0C880	135 aa		9.54	□□□□□ -0.88
PABPC4-225	ENST00000531243		R4GN34	69 aa		9.54	□□□□□ -0.88
PABPC4-225	ENST00000531243	SEC61G	P60059	68 aa		9.5	□□□□□ -0.89
PABPC4-225	ENST00000531243	FSIP2	Q5CZC0	6907 aa		9.49	□□□□□ -0.89
PABPC4-225	ENST00000531243		Q5VV11	94 aa		9.48	□□□□□ -0.89
PABPC4-225	ENST00000531243	USH2A	O75445	5202 aa		9.47	□□□□□ -0.89
PABPC4-225	ENST00000531243	LCE4A	Q5TA78	99 aa		9.47	□□□□□ -0.89
PABPC4-225	ENST00000531243		M0QZ58	72 aa		9.45	□□□□□ -0.9
PABPC4-225	ENST00000531243	KRTAP19-8	Q3LI54	63 aa		9.45	□□□□□ -0.9
PABPC4-225	ENST00000531243	SERP1	Q9Y6X1	66 aa		9.44	□□□□□ -0.9
PABPC4-225	ENST00000531243		H3BS24	57 aa		9.37	□□□□□ -0.91
PABPC4-225	ENST00000531243	KRTAP4-9	Q9BYQ8	210 aa		9.36	□□□□□ -0.91
PABPC4-225	ENST00000531243	PCP4	P48539	62 aa		9.34	□□□□□ -0.91
PABPC4-225	ENST00000531243	MT1B	P07438	61 aa		9.33	□□□□□ -0.92
PABPC4-225	ENST00000531243	KRTAP19-6	Q3LI70	58 aa		9.31	□□□□□ -0.92
PABPC4-225	ENST00000531243		A0A1B0GU69	56 aa		9.29	□□□□□ -0.92
PABPC4-225	ENST00000531243	SSPO	A2VEC9	5147 aa		9.27	□□□□□ -0.92
PABPC4-225	ENST00000531243	LINC01554	Q52M75	96 aa		9.27	□□□□□ -0.93
PABPC4-225	ENST00000531243	KRTAP9-7	A8MTY7	169 aa		9.26	□□□□□ -0.93
PABPC4-225	ENST00000531243	PLAC4	Q8WY50	150 aa		9.26	□□□□□ -0.93
PABPC4-225	ENST00000531243	PRR15L	Q9BU68	103 aa		9.22	□□□□□ -0.93
PABPC4-225	ENST00000531243		A0A1B0GU33	70 aa		9.2	□□□□□ -0.94
PABPC4-225	ENST00000531243	KRTAP19-4	Q3LI73	84 aa		9.2	□□□□□ -0.94
PABPC4-225	ENST00000531243	KRTAP4-2	Q9BYR5	136 aa		9.16	□□□□□ -0.94
PABPC4-225	ENST00000531243	LINC01558	Q9Y6Z2	57 aa		9.16	□□□□□ -0.94
PABPC4-225	ENST00000531243		A6NN06	94 aa		9.14	□□□□□ -0.95
PABPC4-225	ENST00000531243	KRTAP13-4	Q3LI77	160 aa		9.1	□□□□□ -0.95
PABPC4-225	ENST00000531243	KRTAP10-5	P60370	271 aa		9.06	□□□□□ -0.96
PABPC4-225	ENST00000531243	PRO2289	Q9P1D8	64 aa		9.06	□□□□□ -0.96
PABPC4-225	ENST00000531243		V9GYY9	64 aa		9.04	□□□□□ -0.96
PABPC4-225	ENST00000531243	SPATA8	Q6RVD6	105 aa		9.03	□□□□□ -0.96
PABPC4-225	ENST00000531243	KRTAP4-11	Q9BYQ6	195 aa		9.03	□□□□□ -0.96
PABPC4-225	ENST00000531243	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	9.01	□□□□□ -0.97
PABPC4-225	ENST00000531243	SMIM26	A0A096LP01	95 aa		8.99	□□□□□ -0.97
PABPC4-225	ENST00000531243		A0A0D9SG42	100 aa		8.96	□□□□□ -0.98
PABPC4-225	ENST00000531243	RPS28	P62857	69 aa	Known RBP	8.95	□□□□□ -0.98
PABPC4-225	ENST00000531243		Q1T7F1	81 aa		8.92	□□□□□ -0.98
PABPC4-225	ENST00000531243	LCE5A	Q5TCM9	118 aa		8.91	□□□□□ -0.98
PABPC4-225	ENST00000531243	UQCR11	O14957	56 aa		8.89	□□□□□ -0.99
PABPC4-225	ENST00000531243	MT1X	P80297	61 aa		8.88	□□□□□ -0.99
PABPC4-225	ENST00000531243	CAMK2N1	Q7Z7J9	78 aa		8.86	□□□□□ -0.99
PABPC4-225	ENST00000531243	SPINT4	Q6UDR6	99 aa		8.84	□□□□□ -0.99
PABPC4-225	ENST00000531243	PSPHP1	O15172	72 aa		8.79	□□□□□ -1
PABPC4-225	ENST00000531243		A8MU10	97 aa		8.77	□□□□□ -1.01
PABPC4-225	ENST00000531243	KRTAP12-1	P59990	96 aa		8.76	□□□□□ -1.01
PABPC4-225	ENST00000531243	MIR22HG	Q0VDD5	57 aa		8.7	□□□□□ -1.02
PABPC4-225	ENST00000531243	KRTAP12-2	P59991	146 aa		8.69	□□□□□ -1.02
PABPC4-225	ENST00000531243	MACF1	Q9UPN3	7388 aa	Known RBP	8.64	□□□□□ -1.03
PABPC4-225	ENST00000531243		A6NED7	52 aa		8.58	□□□□□ -1.04
PABPC4-225	ENST00000531243		K7ERS5	55 aa		8.55	□□□□□ -1.04
PABPC4-225	ENST00000531243	KRTAP6-3	Q3LI67	103 aa		8.53	□□□□□ -1.04
PABPC4-225	ENST00000531243	SYNE2	Q8WXH0	6885 aa	Known RBP	8.49	□□□□□ -1.05
PABPC4-225	ENST00000531243	KRTAP10-7	P60409	375 aa	Predicted RBP	8.49	□□□□□ -1.05
PABPC4-225	ENST00000531243	KRTAP10-12	P60413	245 aa		8.48	□□□□□ -1.05
PABPC4-225	ENST00000531243	KRTAP8-1	Q8IUC2	63 aa		8.4	□□□□□ -1.06
PABPC4-225	ENST00000531243	KRTAP5-9	P26371	169 aa		8.33	□□□□□ -1.08
PABPC4-225	ENST00000531243	TNP1	P09430	55 aa		8.31	□□□□□ -1.08
PABPC4-225	ENST00000531243	C10orf95	Q9H7T3	257 aa		8.31	□□□□□ -1.08
PABPC4-225	ENST00000531243	CDC42SE1	Q9NRR8	79 aa		8.3	□□□□□ -1.08
PABPC4-225	ENST00000531243	KMT2D	O14686	5537 aa		8.28	□□□□□ -1.08
PABPC4-225	ENST00000531243	SPRR2F	Q96RM1	72 aa		8.23	□□□□□ -1.09
PABPC4-225	ENST00000531243	KRTAP5-3	Q6L8H2	238 aa		8.1	□□□□□ -1.11
PABPC4-225	ENST00000531243	KRTAP25-1	Q3LHN0	102 aa		8.09	□□□□□ -1.11

Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms