RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 MUC17Q685J3 4493 aa2.97□□□□□ -1.93
VPS11-204ENST00000530809 FSIP2Q5CZC0 6907 aa2.97□□□□□ -1.93
VPS11-204ENST00000530809 KRTAP16-1A8MUX0 517 aa2.96□□□□□ -1.94
VPS11-204ENST00000530809 KRTAP10-6P60371 365 aaPredicted RBP2.96□□□□□ -1.94
VPS11-204ENST00000530809 Q1T7F1 81 aa2.96□□□□□ -1.94
VPS11-204ENST00000530809 NOTCH2NLQ7Z3S9 236 aa2.96□□□□□ -1.94
VPS11-204ENST00000530809 KRTAP19-2Q3LHN2 52 aa2.95□□□□□ -1.94
VPS11-204ENST00000530809 KRTAP9-9Q9BYP9 154 aa2.95□□□□□ -1.94
VPS11-204ENST00000530809 KRTAP9-4Q9BYQ2 154 aa2.95□□□□□ -1.94
VPS11-204ENST00000530809 IGKV2-30P06310 120 aa2.94□□□□□ -1.94
VPS11-204ENST00000530809 Q5W150 140 aa2.94□□□□□ -1.94
VPS11-204ENST00000530809 M0R2T5 61 aa2.93□□□□□ -1.94
VPS11-204ENST00000530809 PCOTHQ58A44 107 aa2.93□□□□□ -1.94
VPS11-204ENST00000530809 A0A0A0MQY5 61 aa2.92□□□□□ -1.94
VPS11-204ENST00000530809 ACYP2P14621 99 aa2.92□□□□□ -1.94
VPS11-204ENST00000530809 C7orf65Q6ZTY9 151 aa2.92□□□□□ -1.94
VPS11-204ENST00000530809 COA5Q86WW8 74 aa2.92□□□□□ -1.94
VPS11-204ENST00000530809 DMAC1Q96GE9 116 aa2.92□□□□□ -1.94
VPS11-204ENST00000530809 C20orf166-AS1Q96NR2 134 aa2.92□□□□□ -1.94
VPS11-204ENST00000530809 A8MUN3 132 aa2.91□□□□□ -1.94
VPS11-204ENST00000530809 C4orf26Q17RF5 130 aa2.91□□□□□ -1.94
VPS11-204ENST00000530809 KRTAP15-1Q3LI76 137 aa2.91□□□□□ -1.94
VPS11-204ENST00000530809 A8MUU9 505 aa2.9□□□□□ -1.95
VPS11-204ENST00000530809 KRTAP9-3Q9BYQ3 159 aa2.9□□□□□ -1.95
VPS11-204ENST00000530809 HRES1P13985 223 aa2.89□□□□□ -1.95
VPS11-204ENST00000530809 MPLKIPQ8TAP9 179 aa2.89□□□□□ -1.95
VPS11-204ENST00000530809 COX6B2Q6YFQ2 88 aa2.88□□□□□ -1.95
VPS11-204ENST00000530809 Q75L30 129 aa2.88□□□□□ -1.95
VPS11-204ENST00000530809 IGKV2D-30A0A075B6S6 120 aa2.87□□□□□ -1.95
VPS11-204ENST00000530809 CHKB-CPT1BH3BT56 60 aa2.87□□□□□ -1.95
VPS11-204ENST00000530809 PRO0628Q9UI54 55 aa2.87□□□□□ -1.95
VPS11-204ENST00000530809 LINC01558Q9Y6Z2 57 aa2.87□□□□□ -1.95
VPS11-204ENST00000530809 LCE1DQ5T752 114 aa2.85□□□□□ -1.95
VPS11-204ENST00000530809 SPTSSBQ8NFR3 76 aa2.85□□□□□ -1.95
VPS11-204ENST00000530809 PRR15LQ9BU68 103 aa2.85□□□□□ -1.95
VPS11-204ENST00000530809 KRTAP4-8A0A0G2JLE6 195 aa2.84□□□□□ -1.95
VPS11-204ENST00000530809 C9orf92A6NGG3 77 aa2.83□□□□□ -1.96
VPS11-204ENST00000530809 LCE5AQ5TCM9 118 aa2.83□□□□□ -1.96
VPS11-204ENST00000530809 Q5VV11 94 aa2.83□□□□□ -1.96
VPS11-204ENST00000530809 BRK1Q8WUW1 75 aa2.83□□□□□ -1.96
VPS11-204ENST00000530809 PSPHP1O15172 72 aa2.82□□□□□ -1.96
VPS11-204ENST00000530809 RPL37P61927 97 aaKnown RBP2.81□□□□□ -1.96
VPS11-204ENST00000530809 ATP11AUNQ6ZP68 121 aa2.81□□□□□ -1.96
VPS11-204ENST00000530809 A6NED7 52 aa2.79□□□□□ -1.96
VPS11-204ENST00000530809 SPINK7P58062 85 aa2.79□□□□□ -1.96
VPS11-204ENST00000530809 CDC42SE1Q9NRR8 79 aa2.79□□□□□ -1.96
VPS11-204ENST00000530809 A0A1B0GU69 56 aa2.78□□□□□ -1.96
VPS11-204ENST00000530809 KRTAP9-8Q9BYQ0 159 aa2.78□□□□□ -1.96
VPS11-204ENST00000530809 SEC61GP60059 68 aa2.77□□□□□ -1.97
VPS11-204ENST00000530809 FLGP20930 4061 aaPredicted RBP2.76□□□□□ -1.97
VPS11-204ENST00000530809 UQCR11O14957 56 aa2.75□□□□□ -1.97
VPS11-204ENST00000530809 KRTAP4-9Q9BYQ8 210 aa2.73□□□□□ -1.97
VPS11-204ENST00000530809 KRTAP4-7Q9BYR0 210 aa2.73□□□□□ -1.97
VPS11-204ENST00000530809 FCGBPQ9Y6R7 5405 aaPredicted RBP2.72□□□□□ -1.97
VPS11-204ENST00000530809 SSPOA2VEC9 5147 aa2.72□□□□□ -1.97
VPS11-204ENST00000530809 MT2AP02795 61 aa2.71□□□□□ -1.98
VPS11-204ENST00000530809 KRTAP6-3Q3LI67 103 aa2.71□□□□□ -1.98
VPS11-204ENST00000530809 KRTAP19-6Q3LI70 58 aa2.7□□□□□ -1.98
VPS11-204ENST00000530809 SPATA8Q6RVD6 105 aa2.7□□□□□ -1.98
VPS11-204ENST00000530809 LCA10Q71F78 164 aa2.7□□□□□ -1.98
VPS11-204ENST00000530809 USH2AO75445 5202 aa2.69□□□□□ -1.98
VPS11-204ENST00000530809 KRTAP10-10P60014 251 aa2.69□□□□□ -1.98
VPS11-204ENST00000530809 MIR22HGQ0VDD5 57 aa2.69□□□□□ -1.98
VPS11-204ENST00000530809 RBM12B-AS1Q9P1G2 102 aa2.69□□□□□ -1.98
VPS11-204ENST00000530809 MT1FP04733 61 aa2.68□□□□□ -1.98
VPS11-204ENST00000530809 PMAIP1Q13794 54 aa2.68□□□□□ -1.98
VPS11-204ENST00000530809 S4R3F8 94 aa2.68□□□□□ -1.98
VPS11-204ENST00000530809 H1FX-AS1Q4G0G2 97 aa2.67□□□□□ -1.98
VPS11-204ENST00000530809 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
VPS11-204ENST00000530809 A0A1B0GU33 70 aa2.65□□□□□ -1.99
VPS11-204ENST00000530809 A6NN06 94 aa2.65□□□□□ -1.99
VPS11-204ENST00000530809 KTN1-AS1Q86SY8 53 aa2.65□□□□□ -1.99
VPS11-204ENST00000530809 A8MU10 97 aa2.63□□□□□ -1.99
VPS11-204ENST00000530809 H0YAA0 97 aa2.62□□□□□ -1.99
VPS11-204ENST00000530809 K7ERS5 55 aa2.62□□□□□ -1.99
VPS11-204ENST00000530809 KRTAP20-1Q3LI63 56 aa2.62□□□□□ -1.99
VPS11-204ENST00000530809 MACF1Q9UPN3 7388 aaKnown RBP2.62□□□□□ -1.99
VPS11-204ENST00000530809 CSAG1Q6PB30 78 aa2.61□□□□□ -1.99
VPS11-204ENST00000530809 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
VPS11-204ENST00000530809 SYNE2Q8WXH0 6885 aaKnown RBP2.56□□□□□ -2
VPS11-204ENST00000530809 M0QZ58 72 aa2.56□□□□□ -2
VPS11-204ENST00000530809 ADM2Q7Z4H4 148 aa2.54□□□□□ -2
VPS11-204ENST00000530809 P0C880 135 aa2.51□□□□□ -2.01
VPS11-204ENST00000530809 KRTAP2-3P0C7H8 128 aa2.5□□□□□ -2.01
VPS11-204ENST00000530809 KRTAP5-9P26371 169 aa2.5□□□□□ -2.01
VPS11-204ENST00000530809 KRTAP2-4Q9BYR9 128 aa2.5□□□□□ -2.01
VPS11-204ENST00000530809 KRTAP13-4Q3LI77 160 aa2.49□□□□□ -2.01
VPS11-204ENST00000530809 R4GN34 69 aa2.48□□□□□ -2.01
VPS11-204ENST00000530809 ROMO1P60602 79 aa2.47□□□□□ -2.01
VPS11-204ENST00000530809 CRIPTQ9P021 101 aa2.47□□□□□ -2.01
VPS11-204ENST00000530809 A0A0D9SG42 100 aa2.46□□□□□ -2.02
VPS11-204ENST00000530809 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
VPS11-204ENST00000530809 KRTAP10-5P60370 271 aa2.43□□□□□ -2.02
VPS11-204ENST00000530809 KRTAP25-1Q3LHN0 102 aa2.43□□□□□ -2.02
VPS11-204ENST00000530809 LCE1AQ5T7P2 110 aa2.43□□□□□ -2.02
VPS11-204ENST00000530809 PRAC1Q96KF2 57 aa2.43□□□□□ -2.02
VPS11-204ENST00000530809 MUC12Q9UKN1 5478 aa2.42□□□□□ -2.02
VPS11-204ENST00000530809 KRTAP12-2P59991 146 aa2.42□□□□□ -2.02
VPS11-204ENST00000530809 LINC01554Q52M75 96 aa2.42□□□□□ -2.02
VPS11-204ENST00000530809 SPINT4Q6UDR6 99 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms